Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_020859.1
Length=175430
Score E
Sequences producing significant alignments: (Bits) Value
seq19 711 0.0
>seq19
Length=72585
Score = 711 bits (788), Expect = 0.0
Identities = 736/959 (77%), Gaps = 6/959 (1%)
Strand=Plus/Plus
Query 165796 AACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCAACTCTGTTGGCAGCAACT 165855
|||||||| || |||||||||| || | ||||| || ||| | | ||||||||
Sbjct 10202 AACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACT 10261
Query 165856 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 165914
|| | |||||||| || || || |||||||| ||||| || ||||| || ||||||||
Sbjct 10262 -TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGA 10320
Query 165915 ACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 165974
|| || |||| || || ||||| || |||||||||||||||||||| || | || |
Sbjct 10321 GCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTAC 10380
Query 165975 TTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAATG 166034
|| ||||| || || || |||||||| || ||||||||||| || || ||||| || ||
Sbjct 10381 ATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTG 10440
Query 166035 GCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTGATTGGCATCTATGC 166094
||| || ||||||||||||| ||| || | || | |||||| | || || || | | |
Sbjct 10441 GCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTC 10500
Query 166095 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGT 166154
|||||||||||||||||||| || |||| |||| |||| |||||||| ||||| |||
Sbjct 10501 ATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGT 10560
Query 166155 TGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCA 166214
|||||||| || || || || || || | || |||||| | ||||| || |||||||
Sbjct 10561 AGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCA 10620
Query 166215 AGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGT 166274
||| ||||||||||| |||||| || || || || ||||| ||||||| |||| | ||
Sbjct 10621 GGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGT 10680
Query 166275 CTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGT 166334
||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| ||
Sbjct 10681 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGT 10740
Query 166335 ATTTGGTGG--CAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTT 166392
||| ||||| || || || ||| |||||||| | || ||||| |||||| |
Sbjct 10741 ATTCGGTGGTTCACTT--TTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTCATC 10798
Query 166393 AGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAA 166452
| ||||| ||||| | ||| || |||| || |||||||||||||||||||||||
Sbjct 10799 CGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAG 10858
Query 166453 ACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 166512
|| |||||||||||||| || || ||||||||||| ||| | ||||||||||||||||||
Sbjct 10859 ACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCA 10918
Query 166513 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 166572
||||||||||| || || | ||||||||||| || ||||| || | || ||||||
Sbjct 10919 TTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGG 10978
Query 166573 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 166632
||||| || | || | || || ||||| |||||||| ||||| |||||||||||||||
Sbjct 10979 TTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAG 11038
Query 166633 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCT 166692
|| | | ||| | || ||||| | ||||| ||||| ||| | | ||||| |||
Sbjct 11039 TCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCT 11098
Query 166693 GGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGC 166751
|||||||||||||| ||||| ||||||||||| ||||||||||| || ||||| ||
Sbjct 11099 AACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGC 11157
Score = 711 bits (788), Expect = 0.0
Identities = 736/959 (77%), Gaps = 6/959 (1%)
Strand=Plus/Minus
Query 165796 AACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCAACTCTGTTGGCAGCAACT 165855
|||||||| || |||||||||| || | ||||| || ||| | | ||||||||
Sbjct 36941 AACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACT 36882
Query 165856 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 165914
|| | |||||||| || || || |||||||| ||||| || ||||| || ||||||||
Sbjct 36881 -TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGA 36823
Query 165915 ACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 165974
|| || |||| || || ||||| || |||||||||||||||||||| || | || |
Sbjct 36822 GCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTAC 36763
Query 165975 TTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAATG 166034
|| ||||| || || || |||||||| || ||||||||||| || || ||||| || ||
Sbjct 36762 ATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTG 36703
Query 166035 GCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTGATTGGCATCTATGC 166094
||| || ||||||||||||| ||| || | || | |||||| | || || || | | |
Sbjct 36702 GCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTC 36643
Query 166095 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGT 166154
|||||||||||||||||||| || |||| |||| |||| |||||||| ||||| |||
Sbjct 36642 ATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGT 36583
Query 166155 TGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCA 166214
|||||||| || || || || || || | || |||||| | ||||| || |||||||
Sbjct 36582 AGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCA 36523
Query 166215 AGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGT 166274
||| ||||||||||| |||||| || || || || ||||| ||||||| |||| | ||
Sbjct 36522 GGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGT 36463
Query 166275 CTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGT 166334
||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| ||
Sbjct 36462 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGT 36403
Query 166335 ATTTGGTGG--CAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTT 166392
||| ||||| || ||| | ||| |||||||| | || ||||| |||||| |
Sbjct 36402 ATTCGGTGGTTCACTTTTCTC--TGCAATGCACGGTTCACTCGTAACTTCATCTCTCATC 36345
Query 166393 AGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAA 166452
| ||||| ||||| | ||| || |||| || |||||||||||||||||||||||
Sbjct 36344 CGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAG 36285
Query 166453 ACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 166512
|| |||||||||||||| || || ||||||||||| ||| | ||||||||||||||||||
Sbjct 36284 ACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCA 36225
Query 166513 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 166572
||||||||||| || || | ||||||||||| || ||||| || | || ||||||
Sbjct 36224 TTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGG 36165
Query 166573 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 166632
||||| || | || | || || ||||| |||||||| ||||| |||||||||||||||
Sbjct 36164 TTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAG 36105
Query 166633 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCT 166692
|| | | ||| | || ||||| | ||||| ||||| ||| | | ||||| |||
Sbjct 36104 TCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCT 36045
Query 166693 GGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGC 166751
|||||||||||||| ||||| ||||||||||| ||||||||||| || ||||| ||
Sbjct 36044 AACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGC 35986
Score = 540 bits (598), Expect = 1e-148
Identities = 738/1026 (72%), Gaps = 6/1026 (1%)
Strand=Plus/Plus
Query 167008 GGGTGGTTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGG 167067
|| |||||||| | | || ||||||||||| | |||||||| || || || || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 167068 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 167126
|| ||| || || || |||||| ||| || |||| |||| || ||| ||||||| ||
Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 167127 TACTTTCGTCACGAGTTGGTATACTCATGGACTCGC--GTCCAGTTATCTTGAGGGTGCG 167184
|| ||||| || ||||| || || || | || || || || ||||||||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCA--TACCTTGAGGGATGT 2165
Query 167185 AACTTTCTTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTT 167244
||||| ||||| ||||||| || ||| | | ||||| ||| || | |||||
Sbjct 2166 AACTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTC 2225
Query 167245 CTATGGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGG 167304
|| ||||| || ||| | ||||| || ||| | ||| || ||||| ||| | |||
Sbjct 2226 CTTTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGG 2285
Query 167305 GCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAA 167364
| || || || || ||||| || || | | || || || ||||| || || ||||||
Sbjct 2286 ACATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAA 2345
Query 167365 CTTGCTCGCCTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCT 167424
|||| || | || ||||| ||||| || ||||| ||||| | ||||| |||
Sbjct 2346 ATTGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCT 2405
Query 167425 GTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCG 167484
|| || || || |||||| | || || || || ||| | ||||||||||| ||
Sbjct 2406 GTATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCT 2465
Query 167485 TCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGG 167544
|| || || || || | || ||||| ||| | || ||| ||||||| ||||||||||||
Sbjct 2466 TCATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGG 2525
Query 167545 ACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCT 167604
||||| || ||||| || |||||||| ||||| ||| | || || | ||| | |||| |
Sbjct 2526 ACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGT 2585
Query 167605 GCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACT 167664
|| || || || | || |||||||| || | | ||||||||||| ||||||||
Sbjct 2586 GCGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACT 2645
Query 167665 TTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGA 167724
|| ||||| | | ||||| | ||||||||||| |||||||| |||||||||||
Sbjct 2646 TTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGT 2705
Query 167725 TTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATG 167784
|||||||| ||||| ||||| | |||||| ||||| || |||||||| |||||||||
Sbjct 2706 TTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATG 2765
Query 167785 TTATTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTT 167844
| ||||| || || | || | |||| ||| | |||| | | || | || |||
Sbjct 2766 CTTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTT 2825
Query 167845 AATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTT 167904
|| || ||||| ||||| ||||| || ||||||||| | || || || ||||| ||||||
Sbjct 2826 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTT 2885
Query 167905 GAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCT 167964
||||| ||||| ||||| || || ||||| || |||||| |||| |||||| | ||| ||
Sbjct 2886 GAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCT 2945
Query 167965 ATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCA 168024
||||| |||||||| ||| |||| ||||| ||||| || || ||||| || |||||
Sbjct 2946 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 3005
Query 168025 CTATAA 168030
|| |||
Sbjct 3006 CTTTAA 3011
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 18127 ATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAA 18186
||||||||||||||||| || ||||| |||| ||||||| ||||||||| |||||||||
Sbjct 58891 ATTCCTCAGTAGCTCAGTGGTAGAGCGATCGGCTGTTAACCGATTGGTCACAGGTTCAAA 58950
Query 18187 TCCTACCTGGGGAG 18200
|||| ||||||||
Sbjct 58951 TCCTGTCTGGGGAG 58964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 561247866703600
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