Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_020859.1 Length=175430 Score E Sequences producing significant alignments: (Bits) Value seq19 711 0.0 >seq19 Length=72585 Score = 711 bits (788), Expect = 0.0 Identities = 736/959 (77%), Gaps = 6/959 (1%) Strand=Plus/Plus Query 165796 AACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCAACTCTGTTGGCAGCAACT 165855 |||||||| || |||||||||| || | ||||| || ||| | | |||||||| Sbjct 10202 AACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACT 10261 Query 165856 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 165914 || | |||||||| || || || |||||||| ||||| || ||||| || |||||||| Sbjct 10262 -TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGA 10320 Query 165915 ACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 165974 || || |||| || || ||||| || |||||||||||||||||||| || | || | Sbjct 10321 GCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTAC 10380 Query 165975 TTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAATG 166034 || ||||| || || || |||||||| || ||||||||||| || || ||||| || || Sbjct 10381 ATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTG 10440 Query 166035 GCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTGATTGGCATCTATGC 166094 ||| || ||||||||||||| ||| || | || | |||||| | || || || | | | Sbjct 10441 GCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTC 10500 Query 166095 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGT 166154 |||||||||||||||||||| || |||| |||| |||| |||||||| ||||| ||| Sbjct 10501 ATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGT 10560 Query 166155 TGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCA 166214 |||||||| || || || || || || | || |||||| | ||||| || ||||||| Sbjct 10561 AGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCA 10620 Query 166215 AGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGT 166274 ||| ||||||||||| |||||| || || || || ||||| ||||||| |||| | || Sbjct 10621 GGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGT 10680 Query 166275 CTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGT 166334 ||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| || Sbjct 10681 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGT 10740 Query 166335 ATTTGGTGG--CAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTT 166392 ||| ||||| || || || ||| |||||||| | || ||||| |||||| | Sbjct 10741 ATTCGGTGGTTCACTT--TTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTCATC 10798 Query 166393 AGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAA 166452 | ||||| ||||| | ||| || |||| || ||||||||||||||||||||||| Sbjct 10799 CGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAG 10858 Query 166453 ACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 166512 || |||||||||||||| || || ||||||||||| ||| | |||||||||||||||||| Sbjct 10859 ACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCA 10918 Query 166513 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 166572 ||||||||||| || || | ||||||||||| || ||||| || | || |||||| Sbjct 10919 TTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGG 10978 Query 166573 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 166632 ||||| || | || | || || ||||| |||||||| ||||| ||||||||||||||| Sbjct 10979 TTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAG 11038 Query 166633 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCT 166692 || | | ||| | || ||||| | ||||| ||||| ||| | | ||||| ||| Sbjct 11039 TCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCT 11098 Query 166693 GGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGC 166751 |||||||||||||| ||||| ||||||||||| ||||||||||| || ||||| || Sbjct 11099 AACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGC 11157 Score = 711 bits (788), Expect = 0.0 Identities = 736/959 (77%), Gaps = 6/959 (1%) Strand=Plus/Minus Query 165796 AACCGTCTGTATGTCGGTTGGTTTGGTACGCTGATGATTCCAACTCTGTTGGCAGCAACT 165855 |||||||| || |||||||||| || | ||||| || ||| | | |||||||| Sbjct 36941 AACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACT 36882 Query 165856 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGACGGCATCCGTGA 165914 || | |||||||| || || || |||||||| ||||| || ||||| || |||||||| Sbjct 36881 -TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGA 36823 Query 165915 ACCCGTCGCTGGTTCTCTGATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 165974 || || |||| || || ||||| || |||||||||||||||||||| || | || | Sbjct 36822 GCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTAC 36763 Query 165975 TTCCAACGCAATTGGTCTACACTTCTATCCCATCTGGGAAGCCGCATCGCTTGACGAATG 166034 || ||||| || || || |||||||| || ||||||||||| || || ||||| || || Sbjct 36762 ATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTG 36703 Query 166035 GCTCTATAACGGTGGTCCTTTCCAACTGGTTGTCTTCCACTTCCTGATTGGCATCTATGC 166094 ||| || ||||||||||||| ||| || | || | |||||| | || || || | | | Sbjct 36702 GCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTC 36643 Query 166095 CTACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTAGGTATGCGTCCATGGATCTGTGT 166154 |||||||||||||||||||| || |||| |||| |||| |||||||| ||||| ||| Sbjct 36642 ATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGT 36583 Query 166155 TGCTTACTCAGCACCAGTCGCTGCTGCGAGTGCAGTATTCCTAGTATATCCTTTCGGTCA 166214 |||||||| || || || || || || | || |||||| | ||||| || ||||||| Sbjct 36582 AGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCA 36523 Query 166215 AGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATGTTGGT 166274 ||| ||||||||||| |||||| || || || || ||||| ||||||| |||| | || Sbjct 36522 GGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGT 36463 Query 166275 CTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCTGGGGT 166334 ||||| ||||||||||| || || ||||| || ||||| ||||| || |||||||| || Sbjct 36462 ATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGT 36403 Query 166335 ATTTGGTGG--CAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTT 166392 ||| ||||| || ||| | ||| |||||||| | || ||||| |||||| | Sbjct 36402 ATTCGGTGGTTCACTTTTCTC--TGCAATGCACGGTTCACTCGTAACTTCATCTCTCATC 36345 Query 166393 AGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAA 166452 | ||||| ||||| | ||| || |||| || ||||||||||||||||||||||| Sbjct 36344 CGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAG 36285 Query 166453 ACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCA 166512 || |||||||||||||| || || ||||||||||| ||| | |||||||||||||||||| Sbjct 36284 ACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCA 36225 Query 166513 TTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGG 166572 ||||||||||| || || | ||||||||||| || ||||| || | || |||||| Sbjct 36224 TTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGG 36165 Query 166573 TTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAG 166632 ||||| || | || | || || ||||| |||||||| ||||| ||||||||||||||| Sbjct 36164 TTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAG 36105 Query 166633 TCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGATGTTCTTAACCGCGCT 166692 || | | ||| | || ||||| | ||||| ||||| ||| | | ||||| ||| Sbjct 36104 TCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCT 36045 Query 166693 GGTCTCGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCCCTCGACCTCGC 166751 |||||||||||||| ||||| ||||||||||| ||||||||||| || ||||| || Sbjct 36044 AACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGC 35986 Score = 540 bits (598), Expect = 1e-148 Identities = 738/1026 (72%), Gaps = 6/1026 (1%) Strand=Plus/Plus Query 167008 GGGTGGTTTGATGTCCTCGATGACTGGCTTAAAAGGGATCGTTTTGTTTTTGTTGGCTGG 167067 || |||||||| | | || ||||||||||| | |||||||| || || || || ||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 167068 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 167126 || ||| || || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 167127 TACTTTCGTCACGAGTTGGTATACTCATGGACTCGC--GTCCAGTTATCTTGAGGGTGCG 167184 || ||||| || ||||| || || || | || || || || |||||||| Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCA--TACCTTGAGGGATGT 2165 Query 167185 AACTTTCTTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTTTACTTCTT 167244 ||||| ||||| ||||||| || ||| | | ||||| ||| || | ||||| Sbjct 2166 AACTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTC 2225 Query 167245 CTATGGGGTCCTGAATCTCAAGGGGATTTCGTCAGGTGGCTCCAACTTGGGGGACTCTGG 167304 || ||||| || ||| | ||||| || ||| | ||| || ||||| ||| | ||| Sbjct 2226 CTTTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGG 2285 Query 167305 GCTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAA 167364 | || || || || ||||| || || | | || || || ||||| || || |||||| Sbjct 2286 ACATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAA 2345 Query 167365 CTTGCTCGCCTGATTGGTATCCGTCCCTACAATGCTATTGCTTTCTCTGGTCCTATTGCT 167424 |||| || | || ||||| ||||| || ||||| ||||| | ||||| ||| Sbjct 2346 ATTGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCT 2405 Query 167425 GTCTTCGTTAGCGTTTTCCTTCTCTATCCCCTCGGTCAAAGCAGCTGGTTCTTTGCCCCG 167484 || || || || |||||| | || || || || ||| | ||||||||||| || Sbjct 2406 GTATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCT 2465 Query 167485 TCCTTCGGAGTCGCCGCCATCTTCCGATTCCTCCTCTTCCTCCAAGGATTCCACAACTGG 167544 || || || || || | || ||||| ||| | || ||| ||||||| |||||||||||| Sbjct 2466 TCATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGG 2525 Query 167545 ACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATCCTGGGTGGTGCATTGCTTTCT 167604 ||||| || ||||| || |||||||| ||||| ||| | || || | ||| | |||| | Sbjct 2526 ACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGT 2585 Query 167605 GCAATCCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAGCAAGCAAACACT 167664 || || || || | || |||||||| || | | ||||||||||| |||||||| Sbjct 2586 GCGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACT 2645 Query 167665 TTTAAGGCATTCGATTCTACTCAGGAAGAAGAGACTTATTCAATGGTTACAGCAAACCGA 167724 || ||||| | | ||||| | ||||||||||| |||||||| ||||||||||| Sbjct 2646 TTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGT 2705 Query 167725 TTCTGGTCTCAGATCTTCGGCATTGCTTTCAGCAACAAACGCTGGCTTCATTTCTTTATG 167784 |||||||| ||||| ||||| | |||||| ||||| || |||||||| ||||||||| Sbjct 2706 TTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATG 2765 Query 167785 TTATTCGTTCCCGTTATGGGACTTTGGACATCATCGATTGGCATCATTGGTCTGGCTCTT 167844 | ||||| || || | || | |||| ||| | |||| | | || | || ||| Sbjct 2766 CTTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTT 2825 Query 167845 AATCTTCGTGCTTACGATTTCGTTTCTCAAGAGATCAGAGCGGCGGAGGATCCAGAGTTT 167904 || || ||||| ||||| ||||| || ||||||||| | || || || ||||| |||||| Sbjct 2826 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTT 2885 Query 167905 GAAACTTTCTATACTAAAAACATCCTTCTGAATGAAGGTCTTCGAGCATGGTTAGCACCT 167964 ||||| ||||| ||||| || || ||||| || |||||| |||| |||||| | ||| || Sbjct 2886 GAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCT 2945 Query 167965 ATCGATCAACCTCATGAGAACTTTGTGTTCCCAGAGGAAGTTCTCCCACGAGGCAACGCA 168024 ||||| |||||||| ||| |||| ||||| ||||| || || ||||| || ||||| Sbjct 2946 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 3005 Query 168025 CTATAA 168030 || ||| Sbjct 3006 CTTTAA 3011 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 18127 ATTCCTCAGTAGCTCAGCGGCAGAGCCATCGACTGTTAATCGATTGGTCGTAGGTTCAAA 18186 ||||||||||||||||| || ||||| |||| ||||||| ||||||||| ||||||||| Sbjct 58891 ATTCCTCAGTAGCTCAGTGGTAGAGCGATCGGCTGTTAACCGATTGGTCACAGGTTCAAA 58950 Query 18187 TCCTACCTGGGGAG 18200 |||| |||||||| Sbjct 58951 TCCTGTCTGGGGAG 58964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561247866703600