Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_020865.1
Length=45730
Score E
Sequences producing significant alignments: (Bits) Value
seq19 605 8e-169
>seq19
Length=72585
Score = 605 bits (670), Expect = 8e-169
Identities = 733/995 (74%), Gaps = 6/995 (1%)
Strand=Plus/Plus
Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293
|||||||| ||| | || || ||| | ||||||||||| | || ||||||||||| |
Sbjct 10175 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 10234
Query 41294 ATGATTCCGTGCCTCCTTGCCGCTACAACTT--GTTTT-ATTATCGCCTTTGTTGGCGCA 41350
||||| || | ||| | || ||||| || || || | || ||| ||| ||
Sbjct 10235 ATGATCCCTACTTTACTTACAGC---AACTTCAGTATTCATCGTAGCATTTATTGCTGCT 10291
Query 41351 CCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAAC 41410
|| ||||| || |||||||| ||||| || || || |||| || || |||| || |||
Sbjct 10292 CCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAAC 10351
Query 41411 AACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCA 41470
|||||||| || || || || | || | ||| || |||||||| ||||||||||||
Sbjct 10352 AACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCA 10411
Query 41471 ATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACC 41530
|| |||||||| ||| | |||||||| ||||| |||||||| ||||| | ||| || | |
Sbjct 10412 ATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATC 10471
Query 41531 GTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTAT 41590
|||| |||||| |||| || | | | | |||||||| || |||||||| ||| |
Sbjct 10472 GTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTC 10531
Query 41591 CGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACT 41650
|| |||| ||| | || ||||| ||| || |||||||||||||| || || || ||
Sbjct 10532 CGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACA 10591
Query 41651 GCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGG 41710
||||| ||| | || || || | || ||||| ||||| ||||||| ||||| | ||
Sbjct 10592 GCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGT 10651
Query 41711 ATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCAT 41770
|| || || || ||||||| |||| | || ||||||||||||||||| || ||||||||
Sbjct 10652 ATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCAC 10711
Query 41771 CCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCAC 41830
|| || |||||||| ||||| || || ||||| ||||| | |||||||| ||||||
Sbjct 10712 CCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCAC 10771
Query 41831 GGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTAT 41890
||| || || || || || ||||| |||||||| ||||| | | || |||
Sbjct 10772 GGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCA 10831
Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950
|| |||||||| || ||||| |||||||||||||| || || ||||| ||||| || ||
Sbjct 10832 GGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTC 10891
Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010
|| || |||||||||||||| ||| || || || || ||| || || ||||| ||
Sbjct 10892 GGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTC 10951
Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTC 42070
|| |||||| || | || || ||||| | || | || | || || |||||||||
Sbjct 10952 GCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTC 11011
Query 42071 AACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAAC 42130
||| | || || |||||||| ||||| ||| | ||| | | | |||| || || |||
Sbjct 11012 AACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAAC 11071
Query 42131 ACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAAC 42190
|| |||||||| || | |||||||| ||||| || | || || ||||| ||||| |||
Sbjct 11072 ACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAAC 11131
Query 42191 GCACACAACTTCCCGCTTGACCTTGCATCCGTGGA 42225
|| ||||||||||| |||||||||||||| || ||
Sbjct 11132 GCTCACAACTTCCCACTTGACCTTGCATCTGTAGA 11166
Score = 605 bits (670), Expect = 8e-169
Identities = 733/995 (74%), Gaps = 6/995 (1%)
Strand=Plus/Minus
Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293
|||||||| ||| | || || ||| | ||||||||||| | || ||||||||||| |
Sbjct 36968 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 36909
Query 41294 ATGATTCCGTGCCTCCTTGCCGCTACAACTT--GTTTT-ATTATCGCCTTTGTTGGCGCA 41350
||||| || | ||| | || ||||| || || || | || ||| ||| ||
Sbjct 36908 ATGATCCCTACTTTACTTACAGC---AACTTCAGTATTCATCGTAGCATTTATTGCTGCT 36852
Query 41351 CCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAAC 41410
|| ||||| || |||||||| ||||| || || || |||| || || |||| || |||
Sbjct 36851 CCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAAC 36792
Query 41411 AACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCA 41470
|||||||| || || || || | || | ||| || |||||||| ||||||||||||
Sbjct 36791 AACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCA 36732
Query 41471 ATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACC 41530
|| |||||||| ||| | |||||||| ||||| |||||||| ||||| | ||| || | |
Sbjct 36731 ATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATC 36672
Query 41531 GTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTAT 41590
|||| |||||| |||| || | | | | |||||||| || |||||||| ||| |
Sbjct 36671 GTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTC 36612
Query 41591 CGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACT 41650
|| |||| ||| | || ||||| ||| || |||||||||||||| || || || ||
Sbjct 36611 CGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACA 36552
Query 41651 GCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGG 41710
||||| ||| | || || || | || ||||| ||||| ||||||| ||||| | ||
Sbjct 36551 GCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGT 36492
Query 41711 ATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCAT 41770
|| || || || ||||||| |||| | || ||||||||||||||||| || ||||||||
Sbjct 36491 ATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCAC 36432
Query 41771 CCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCAC 41830
|| || |||||||| ||||| || || ||||| ||||| | |||||||| ||||||
Sbjct 36431 CCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCAC 36372
Query 41831 GGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTAT 41890
||| || || || || || ||||| |||||||| ||||| | | || |||
Sbjct 36371 GGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCA 36312
Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950
|| |||||||| || ||||| |||||||||||||| || || ||||| ||||| || ||
Sbjct 36311 GGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTC 36252
Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010
|| || |||||||||||||| ||| || || || || ||| || || ||||| ||
Sbjct 36251 GGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTC 36192
Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTC 42070
|| |||||| || | || || ||||| | || | || | || || |||||||||
Sbjct 36191 GCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTC 36132
Query 42071 AACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAAC 42130
||| | || || |||||||| ||||| ||| | ||| | | | |||| || || |||
Sbjct 36131 AACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAAC 36072
Query 42131 ACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAAC 42190
|| |||||||| || | |||||||| ||||| || | || || ||||| ||||| |||
Sbjct 36071 ACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAAC 36012
Query 42191 GCACACAACTTCCCGCTTGACCTTGCATCCGTGGA 42225
|| ||||||||||| |||||||||||||| || ||
Sbjct 36011 GCTCACAACTTCCCACTTGACCTTGCATCTGTAGA 35977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146214367010376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |