Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq19 605 8e-169 >seq19 Length=72585 Score = 605 bits (670), Expect = 8e-169 Identities = 733/995 (74%), Gaps = 6/995 (1%) Strand=Plus/Plus Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293 |||||||| ||| | || || ||| | ||||||||||| | || ||||||||||| | Sbjct 10175 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 10234 Query 41294 ATGATTCCGTGCCTCCTTGCCGCTACAACTT--GTTTT-ATTATCGCCTTTGTTGGCGCA 41350 ||||| || | ||| | || ||||| || || || | || ||| ||| || Sbjct 10235 ATGATCCCTACTTTACTTACAGC---AACTTCAGTATTCATCGTAGCATTTATTGCTGCT 10291 Query 41351 CCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAAC 41410 || ||||| || |||||||| ||||| || || || |||| || || |||| || ||| Sbjct 10292 CCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAAC 10351 Query 41411 AACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCA 41470 |||||||| || || || || | || | ||| || |||||||| |||||||||||| Sbjct 10352 AACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCA 10411 Query 41471 ATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACC 41530 || |||||||| ||| | |||||||| ||||| |||||||| ||||| | ||| || | | Sbjct 10412 ATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATC 10471 Query 41531 GTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTAT 41590 |||| |||||| |||| || | | | | |||||||| || |||||||| ||| | Sbjct 10472 GTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTC 10531 Query 41591 CGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACT 41650 || |||| ||| | || ||||| ||| || |||||||||||||| || || || || Sbjct 10532 CGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACA 10591 Query 41651 GCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGG 41710 ||||| ||| | || || || | || ||||| ||||| ||||||| ||||| | || Sbjct 10592 GCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGT 10651 Query 41711 ATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCAT 41770 || || || || ||||||| |||| | || ||||||||||||||||| || |||||||| Sbjct 10652 ATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCAC 10711 Query 41771 CCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCAC 41830 || || |||||||| ||||| || || ||||| ||||| | |||||||| |||||| Sbjct 10712 CCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCAC 10771 Query 41831 GGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTAT 41890 ||| || || || || || ||||| |||||||| ||||| | | || ||| Sbjct 10772 GGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCA 10831 Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 || |||||||| || ||||| |||||||||||||| || || ||||| ||||| || || Sbjct 10832 GGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTC 10891 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || |||||||||||||| ||| || || || || ||| || || ||||| || Sbjct 10892 GGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTC 10951 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTC 42070 || |||||| || | || || ||||| | || | || | || || ||||||||| Sbjct 10952 GCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTC 11011 Query 42071 AACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAAC 42130 ||| | || || |||||||| ||||| ||| | ||| | | | |||| || || ||| Sbjct 11012 AACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAAC 11071 Query 42131 ACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAAC 42190 || |||||||| || | |||||||| ||||| || | || || ||||| ||||| ||| Sbjct 11072 ACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAAC 11131 Query 42191 GCACACAACTTCCCGCTTGACCTTGCATCCGTGGA 42225 || ||||||||||| |||||||||||||| || || Sbjct 11132 GCTCACAACTTCCCACTTGACCTTGCATCTGTAGA 11166 Score = 605 bits (670), Expect = 8e-169 Identities = 733/995 (74%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 41234 TTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTCGGAGTCCTT 41293 |||||||| ||| | || || ||| | ||||||||||| | || ||||||||||| | Sbjct 36968 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 36909 Query 41294 ATGATTCCGTGCCTCCTTGCCGCTACAACTT--GTTTT-ATTATCGCCTTTGTTGGCGCA 41350 ||||| || | ||| | || ||||| || || || | || ||| ||| || Sbjct 36908 ATGATCCCTACTTTACTTACAGC---AACTTCAGTATTCATCGTAGCATTTATTGCTGCT 36852 Query 41351 CCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTATGGTAAC 41410 || ||||| || |||||||| ||||| || || || |||| || || |||| || ||| Sbjct 36851 CCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAAC 36792 Query 41411 AACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTCTACCCA 41470 |||||||| || || || || | || | ||| || |||||||| |||||||||||| Sbjct 36791 AACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCA 36732 Query 41471 ATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAACTCACC 41530 || |||||||| ||| | |||||||| ||||| |||||||| ||||| | ||| || | | Sbjct 36731 ATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATC 36672 Query 41531 GTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTTAGCTAT 41590 |||| |||||| |||| || | | | | |||||||| || |||||||| ||| | Sbjct 36671 GTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTC 36612 Query 41591 CGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCTGCGACT 41650 || |||| ||| | || ||||| ||| || |||||||||||||| || || || || Sbjct 36611 CGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACA 36552 Query 41651 GCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCCTTGGGG 41710 ||||| ||| | || || || | || ||||| ||||| ||||||| ||||| | || Sbjct 36551 GCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGT 36492 Query 41711 ATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTTATGCAT 41770 || || || || ||||||| |||| | || ||||||||||||||||| || |||||||| Sbjct 36491 ATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCAC 36432 Query 41771 CCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCTATGCAC 41830 || || |||||||| ||||| || || ||||| ||||| | |||||||| |||||| Sbjct 36431 CCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCAC 36372 Query 41831 GGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAGAACTAT 41890 ||| || || || || || ||||| |||||||| ||||| | | || ||| Sbjct 36371 GGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCA 36312 Query 41891 GGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGCTATTTT 41950 || |||||||| || ||||| |||||||||||||| || || ||||| ||||| || || Sbjct 36311 GGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTC 36252 Query 41951 GGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTCTTTCTT 42010 || || |||||||||||||| ||| || || || || ||| || || ||||| || Sbjct 36251 GGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTC 36192 Query 42011 GCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATGGCTTTC 42070 || |||||| || | || || ||||| | || | || | || || ||||||||| Sbjct 36191 GCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTC 36132 Query 42071 AACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTGATCAAC 42130 ||| | || || |||||||| ||||| ||| | ||| | | | |||| || || ||| Sbjct 36131 AACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAAC 36072 Query 42131 ACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAGCGGAAC 42190 || |||||||| || | |||||||| ||||| || | || || ||||| ||||| ||| Sbjct 36071 ACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAAC 36012 Query 42191 GCACACAACTTCCCGCTTGACCTTGCATCCGTGGA 42225 || ||||||||||| |||||||||||||| || || Sbjct 36011 GCTCACAACTTCCCACTTGACCTTGCATCTGTAGA 35977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146214367010376