Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_020867.1
Length=44892
Score E
Sequences producing significant alignments: (Bits) Value
seq19 598 1e-166
>seq19
Length=72585
Score = 598 bits (662), Expect = 1e-166
Identities = 730/994 (73%), Gaps = 4/994 (0%)
Strand=Plus/Plus
Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348
|||||| ||| | ||||| ||| | ||||||||||| | || ||||| || || |
Sbjct 10175 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 10234
Query 42349 ATGATTCCCTGTCTGCTCGCTGCTACCACCTGTTTTATTGTCGCTTTCATTGCTGCCCCT 42408
||||| || | | || | || || | || || || || || |||||||| |||
Sbjct 10235 ATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCT 10294
Query 42409 CCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAAC 42468
|| ||||| || ||||| || ||||| || || ||||| || ||| |||| || ||||||
Sbjct 10295 CCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 10354
Query 42469 ATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCGATC 42528
|||||||||||||| || | |||| |||||| || ||||| || || || | |||
Sbjct 10355 ATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATC 10414
Query 42529 TGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTCGTG 42588
|||||||| | | ||||| || ||||| ||||| || || ||||| ||||| ||||
Sbjct 10415 TGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTA 10474
Query 42589 TTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACTTTCGTACCGA 42648
| |||||| | ||||| || | || ||| |||| || || ||||| ||||| | |||
Sbjct 10475 TGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGT 10534
Query 42649 CTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCA 42708
| || ||| | || ||||| ||| ||||||||||| ||||| || ||||| || ||
Sbjct 10535 TTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCT 10594
Query 42709 GTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATT 42768
|| ||| | || || ||| | || || |||||||| || ||||||||||||||||| |||
Sbjct 10595 GTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATT 10654
Query 42769 TCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCT 42828
|| || || |||||||||||| | || ||||||||||| || ||||| |||||||| ||
Sbjct 10655 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 10714
Query 42829 TTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGT 42888
||||| |||||||||||||| || ||||| ||||| || | ||||| || ||||| |||
Sbjct 10715 TTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGT 10774
Query 42889 AGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGC 42948
|| || || || ||||| | ||||| || ||||| ||||| ||| ||
Sbjct 10775 TCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGA 10834
Query 42949 TACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGA 43008
||||||||||| ||||| || |||||||| ||||| || || || || |||||||| |||
Sbjct 10835 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGA 10894
Query 43009 CGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTTGCC 43068
|| |||||||||||||| || || || || || || || | |||||||| || ||
Sbjct 10895 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCA 10954
Query 43069 GCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAAC 43128
||||| || |||| || |||||||| || | || | |||||||| || |||
Sbjct 10955 ATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAAC 11014
Query 43129 TTGAATGGTTTTAACTTTAACCAATCACTTGTTGAT--AATCAGAATCATGTCATCCCTA 43186
| || || || ||||| ||||| || | || ||| || | || | ||| || |
Sbjct 11015 CTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGA--CGTGTAATTAACA 11072
Query 43187 CTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATG 43246
| ||||||||||| | || ||||| ||||| || | || || ||||||||||| || |
Sbjct 11073 CATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACG 11132
Query 43247 CACATAACTTCCCGCTTGATCTTGCATCCGTGGA 43280
| || |||||||| ||||| |||||||| || ||
Sbjct 11133 CTCACAACTTCCCACTTGACCTTGCATCTGTAGA 11166
Score = 598 bits (662), Expect = 1e-166
Identities = 730/994 (73%), Gaps = 4/994 (0%)
Strand=Plus/Minus
Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348
|||||| ||| | ||||| ||| | ||||||||||| | || ||||| || || |
Sbjct 36968 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 36909
Query 42349 ATGATTCCCTGTCTGCTCGCTGCTACCACCTGTTTTATTGTCGCTTTCATTGCTGCCCCT 42408
||||| || | | || | || || | || || || || || |||||||| |||
Sbjct 36908 ATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCT 36849
Query 42409 CCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAAC 42468
|| ||||| || ||||| || ||||| || || ||||| || ||| |||| || ||||||
Sbjct 36848 CCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 36789
Query 42469 ATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCGATC 42528
|||||||||||||| || | |||| |||||| || ||||| || || || | |||
Sbjct 36788 ATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATC 36729
Query 42529 TGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTCGTG 42588
|||||||| | | ||||| || ||||| ||||| || || ||||| ||||| ||||
Sbjct 36728 TGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTA 36669
Query 42589 TTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACTTTCGTACCGA 42648
| |||||| | ||||| || | || ||| |||| || || ||||| ||||| | |||
Sbjct 36668 TGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGT 36609
Query 42649 CTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCA 42708
| || ||| | || ||||| ||| ||||||||||| ||||| || ||||| || ||
Sbjct 36608 TTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCT 36549
Query 42709 GTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATT 42768
|| ||| | || || ||| | || || |||||||| || ||||||||||||||||| |||
Sbjct 36548 GTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATT 36489
Query 42769 TCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCT 42828
|| || || |||||||||||| | || ||||||||||| || ||||| |||||||| ||
Sbjct 36488 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 36429
Query 42829 TTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGT 42888
||||| |||||||||||||| || ||||| ||||| || | ||||| || ||||| |||
Sbjct 36428 TTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGT 36369
Query 42889 AGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGC 42948
|| || || || ||||| | ||||| || ||||| ||||| ||| ||
Sbjct 36368 TCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGA 36309
Query 42949 TACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGA 43008
||||||||||| ||||| || |||||||| ||||| || || || || |||||||| |||
Sbjct 36308 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGA 36249
Query 43009 CGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTTGCC 43068
|| |||||||||||||| || || || || || || || | |||||||| || ||
Sbjct 36248 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCA 36189
Query 43069 GCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAAC 43128
||||| || |||| || |||||||| || | || | |||||||| || |||
Sbjct 36188 ATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAAC 36129
Query 43129 TTGAATGGTTTTAACTTTAACCAATCACTTGTTGAT--AATCAGAATCATGTCATCCCTA 43186
| || || || ||||| ||||| || | || ||| || | || | ||| || |
Sbjct 36128 CTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGA--CGTGTAATTAACA 36071
Query 43187 CTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATG 43246
| ||||||||||| | || ||||| ||||| || | || || ||||||||||| || |
Sbjct 36070 CATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACG 36011
Query 43247 CACATAACTTCCCGCTTGATCTTGCATCCGTGGA 43280
| || |||||||| ||||| |||||||| || ||
Sbjct 36010 CTCACAACTTCCCACTTGACCTTGCATCTGTAGA 35977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143532767615412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |