Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_020867.1 Length=44892 Score E Sequences producing significant alignments: (Bits) Value seq19 598 1e-166 >seq19 Length=72585 Score = 598 bits (662), Expect = 1e-166 Identities = 730/994 (73%), Gaps = 4/994 (0%) Strand=Plus/Plus Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348 |||||| ||| | ||||| ||| | ||||||||||| | || ||||| || || | Sbjct 10175 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 10234 Query 42349 ATGATTCCCTGTCTGCTCGCTGCTACCACCTGTTTTATTGTCGCTTTCATTGCTGCCCCT 42408 ||||| || | | || | || || | || || || || || |||||||| ||| Sbjct 10235 ATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCT 10294 Query 42409 CCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAAC 42468 || ||||| || ||||| || ||||| || || ||||| || ||| |||| || |||||| Sbjct 10295 CCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 10354 Query 42469 ATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCGATC 42528 |||||||||||||| || | |||| |||||| || ||||| || || || | ||| Sbjct 10355 ATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATC 10414 Query 42529 TGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTCGTG 42588 |||||||| | | ||||| || ||||| ||||| || || ||||| ||||| |||| Sbjct 10415 TGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTA 10474 Query 42589 TTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACTTTCGTACCGA 42648 | |||||| | ||||| || | || ||| |||| || || ||||| ||||| | ||| Sbjct 10475 TGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGT 10534 Query 42649 CTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCA 42708 | || ||| | || ||||| ||| ||||||||||| ||||| || ||||| || || Sbjct 10535 TTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCT 10594 Query 42709 GTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATT 42768 || ||| | || || ||| | || || |||||||| || ||||||||||||||||| ||| Sbjct 10595 GTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATT 10654 Query 42769 TCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCT 42828 || || || |||||||||||| | || ||||||||||| || ||||| |||||||| || Sbjct 10655 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 10714 Query 42829 TTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGT 42888 ||||| |||||||||||||| || ||||| ||||| || | ||||| || ||||| ||| Sbjct 10715 TTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGT 10774 Query 42889 AGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGC 42948 || || || || ||||| | ||||| || ||||| ||||| ||| || Sbjct 10775 TCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGA 10834 Query 42949 TACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGA 43008 ||||||||||| ||||| || |||||||| ||||| || || || || |||||||| ||| Sbjct 10835 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGA 10894 Query 43009 CGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTTGCC 43068 || |||||||||||||| || || || || || || || | |||||||| || || Sbjct 10895 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCA 10954 Query 43069 GCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAAC 43128 ||||| || |||| || |||||||| || | || | |||||||| || ||| Sbjct 10955 ATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAAC 11014 Query 43129 TTGAATGGTTTTAACTTTAACCAATCACTTGTTGAT--AATCAGAATCATGTCATCCCTA 43186 | || || || ||||| ||||| || | || ||| || | || | ||| || | Sbjct 11015 CTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGA--CGTGTAATTAACA 11072 Query 43187 CTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATG 43246 | ||||||||||| | || ||||| ||||| || | || || ||||||||||| || | Sbjct 11073 CATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACG 11132 Query 43247 CACATAACTTCCCGCTTGATCTTGCATCCGTGGA 43280 | || |||||||| ||||| |||||||| || || Sbjct 11133 CTCACAACTTCCCACTTGACCTTGCATCTGTAGA 11166 Score = 598 bits (662), Expect = 1e-166 Identities = 730/994 (73%), Gaps = 4/994 (0%) Strand=Plus/Minus Query 42289 TTTTGTAACTGGGTGACTTCGACTAACAACCGTCTTTATGTTGGGTGGTTTGGTGTGCTG 42348 |||||| ||| | ||||| ||| | ||||||||||| | || ||||| || || | Sbjct 36968 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 36909 Query 42349 ATGATTCCCTGTCTGCTCGCTGCTACCACCTGTTTTATTGTCGCTTTCATTGCTGCCCCT 42408 ||||| || | | || | || || | || || || || || |||||||| ||| Sbjct 36908 ATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCT 36849 Query 42409 CCGGTAGACATTGATGGCATTCGTGAACCTGTCTCTGGCTCTCTTCTGTATGGCAACAAC 42468 || ||||| || ||||| || ||||| || || ||||| || ||| |||| || |||||| Sbjct 36848 CCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 36789 Query 42469 ATCATCTCTGGTGCCGTCGTGCCTAGCAGTAACGCAATTGGACTACATTTGTATTCGATC 42528 |||||||||||||| || | |||| |||||| || ||||| || || || | ||| Sbjct 36788 ATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATC 36729 Query 42529 TGGGAAGCCAATACCCTTGACGAATGGCTCTACAATGGCGGACCTTATCAGCTCGTCGTG 42588 |||||||| | | ||||| || ||||| ||||| || || ||||| ||||| |||| Sbjct 36728 TGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTA 36669 Query 42589 TTCCACTTCCTTATCGGTATCTTCTCTTACTTGGGACGCGAATGGGAACTTTCGTACCGA 42648 | |||||| | ||||| || | || ||| |||| || || ||||| ||||| | ||| Sbjct 36668 TGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGT 36609 Query 42649 CTTGGGATGAGGCCCTGGATCTTTGTTGCTTACTCTGCCCCTGTGGCTGCAGCGACTGCA 42708 | || ||| | || ||||| ||| ||||||||||| ||||| || ||||| || || Sbjct 36608 TTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCT 36549 Query 42709 GTCTTCCTTGTCTATCCATTTGGGCAAGGTTCTTTTTCAGATGGAATGCCTCTTGGCATT 42768 || ||| | || || ||| | || || |||||||| || ||||||||||||||||| ||| Sbjct 36548 GTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATT 36489 Query 42769 TCCGGTACGTTCAACTTCATGTTGGTCTTCCAGGCTGAACATAACATTCTTATGCATCCT 42828 || || || |||||||||||| | || ||||||||||| || ||||| |||||||| || Sbjct 36488 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 36429 Query 42829 TTCCATATGCTTGGTGTTGCCGGCGTATTTGGTGGGTCGTTGTTCTCAGCTATGCATGGT 42888 ||||| |||||||||||||| || ||||| ||||| || | ||||| || ||||| ||| Sbjct 36428 TTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGT 36369 Query 42889 AGTCTTGTCACCTCTTCTCTTGTGCGTGAAACGACTGAAAACGAAAGCCAAAATTATGGC 42948 || || || || ||||| | ||||| || ||||| ||||| ||| || Sbjct 36368 TCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGA 36309 Query 42949 TACAAGTTCGGTCAAGAGGAGGAGACTTATAACATTGTTGCAGCGCATGGTTACTTTGGA 43008 ||||||||||| ||||| || |||||||| ||||| || || || || |||||||| ||| Sbjct 36308 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGA 36249 Query 43009 CGGCTTATCTTCCAATATGCGTCGTTTAATAATAGTCGCTCTTTGCACTTCTTTCTTGCC 43068 || |||||||||||||| || || || || || || || | |||||||| || || Sbjct 36248 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCA 36189 Query 43069 GCTTGGCCCGTTGTGGGGATTTGGTTCACTTCTCTTGGCGTCAGTACTATGGCGTTTAAC 43128 ||||| || |||| || |||||||| || | || | |||||||| || ||| Sbjct 36188 ATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAAC 36129 Query 43129 TTGAATGGTTTTAACTTTAACCAATCACTTGTTGAT--AATCAGAATCATGTCATCCCTA 43186 | || || || ||||| ||||| || | || ||| || | || | ||| || | Sbjct 36128 CTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGA--CGTGTAATTAACA 36071 Query 43187 CTTGGGCTGATATTTTGAATCGTGCCAACCTTGGCTTTGAGGTGATGCACGAGCGGAATG 43246 | ||||||||||| | || ||||| ||||| || | || || ||||||||||| || | Sbjct 36070 CATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACG 36011 Query 43247 CACATAACTTCCCGCTTGATCTTGCATCCGTGGA 43280 | || |||||||| ||||| |||||||| || || Sbjct 36010 CTCACAACTTCCCACTTGACCTTGCATCTGTAGA 35977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143532767615412