Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq19 820 0.0 >seq19 Length=72585 Score = 820 bits (908), Expect = 0.0 Identities = 766/974 (79%), Gaps = 0/974 (0%) Strand=Plus/Plus Query 154978 TGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCT 155037 ||| | ||||| |||| ||||| | || ||||||||||||| || | ||||||||| Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 155038 TGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGAC 155097 | || | || || || ||||| || || || |||||||| ||||||||||| Sbjct 10244 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 10303 Query 155098 ATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCT 155157 || |||||||| ||||| || || |||| || | ||||| || ||||||||||||||| Sbjct 10304 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 10363 Query 155158 GGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCA 155217 |||||||| |||||| || ||||| || || || |||||||| || || ||||||||| Sbjct 10364 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 10423 Query 155218 GCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTC 155277 || |||||||||||||| | ||||| |||||||||| ||| ||| | || | |||||| Sbjct 10424 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 10483 Query 155278 CTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATG 155337 | |||||||| ||||| |||||| ||||||| ||||||| |||| | || ||| Sbjct 10484 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 10543 Query 155338 CGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTT 155397 ||||||||||| ||| || |||||||| || ||| | || || ||||||||| | Sbjct 10544 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 10603 Query 155398 GTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACT 155457 || || || ||||||| |||||||||||||||| |||||||||||||| ||||| ||| Sbjct 10604 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 10663 Query 155458 TTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATG 155517 || |||| ||| |||| ||||| || || ||||| |||||||||||||| ||||||||| Sbjct 10664 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 10723 Query 155518 CTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTG 155577 ||||| || || ||||| |||||||| || ||||||||||| |||||||||||| | || Sbjct 10724 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 10783 Query 155578 ACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTC 155637 || || || || |||||||| ||||||||| | |||||| ||| || ||||||||| Sbjct 10784 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 10843 Query 155638 GGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATC 155697 |||||||||||||| ||||| ||||| || ||||| || || |||||||| ||||||||| Sbjct 10844 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 10903 Query 155698 TTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCT 155757 ||||| || || || |||||||||||| | || ||||||||||| || ||||| Sbjct 10904 TTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCA 10963 Query 155758 GTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGT 155817 || | | |||||| || ||||||||| | ||||| ||||| |||||||||||||| Sbjct 10964 GTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGA 11023 Query 155818 TTCAACTTCAACCAGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAGAC 155877 |||||||||||||||||||||||||| | | || || || |||||||| || Sbjct 11024 TTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGAT 11083 Query 155878 ATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 155937 || | ||||| ||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 11084 ATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 11143 Query 155938 CCTCTTGACCTTGC 155951 || ||||||||||| Sbjct 11144 CCACTTGACCTTGC 11157 Score = 820 bits (908), Expect = 0.0 Identities = 766/974 (79%), Gaps = 0/974 (0%) Strand=Plus/Minus Query 154978 TGGGTAACTTCTGCTGACAACCGCATCTATGTCGGTTGGTTCGGTGTTCTTATGATCCCT 155037 ||| | ||||| |||| ||||| | || ||||||||||||| || | ||||||||| Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 155038 TGCCTCCTCGCTGCTGCTACATGCTTCATTGTCGCCTTCATTGCTGCACCTCCTGTAGAC 155097 | || | || || || ||||| || || || |||||||| ||||||||||| Sbjct 36899 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 36840 Query 155098 ATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTAATGTATGGTAACAACATCATCTCT 155157 || |||||||| ||||| || || |||| || | ||||| || ||||||||||||||| Sbjct 36839 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 36780 Query 155158 GGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTCCACTTCTATCCTATTTGGGAAGCA 155217 |||||||| |||||| || ||||| || || || |||||||| || || ||||||||| Sbjct 36779 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 36720 Query 155218 GCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCTTTCCAACTTGTAGTCTTCCACTTC 155277 || |||||||||||||| | ||||| |||||||||| ||| ||| | || | |||||| Sbjct 36719 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 36660 Query 155278 CTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGTCTTGGCATG 155337 | |||||||| ||||| |||||| ||||||| ||||||| |||| | || ||| Sbjct 36659 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 36600 Query 155338 CGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCTGCGTTCGCTGTATTCCTT 155397 ||||||||||| ||| || |||||||| || ||| | || || ||||||||| | Sbjct 36599 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 36540 Query 155398 GTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCGATGCCTCTTGGTATCTCTGGTACT 155457 || || || ||||||| |||||||||||||||| |||||||||||||| ||||| ||| Sbjct 36539 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 36480 Query 155458 TTTAACTATATGTTCGTGTTCCAAGCAGAACACAATATCCTTATGCACCCCTTCCACATG 155517 || |||| ||| |||| ||||| || || ||||| |||||||||||||| ||||||||| Sbjct 36479 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 36420 Query 155518 CTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTCTCTGCTATGCACGGTTCATTGGTG 155577 ||||| || || ||||| |||||||| || ||||||||||| |||||||||||| | || Sbjct 36419 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 36360 Query 155578 ACATCTTCACTAATCCGTGAAACTACTGAGCAAGAGTCTCAGAACTATGGTTACAAGTTC 155637 || || || || |||||||| ||||||||| | |||||| ||| || ||||||||| Sbjct 36359 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 36300 Query 155638 GGACAAGAAGAAGAAACTTATAACATTGTTGCTGCTCATGGATACTTCGGTCGTCTTATC 155697 |||||||||||||| ||||| ||||| || ||||| || || |||||||| ||||||||| Sbjct 36299 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 36240 Query 155698 TTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCTGCATGGCCT 155757 ||||| || || || |||||||||||| | || ||||||||||| || ||||| Sbjct 36239 TTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCA 36180 Query 155758 GTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCAACGATGGCATTCAACCTTAACGGT 155817 || | | |||||| || ||||||||| | ||||| ||||| |||||||||||||| Sbjct 36179 GTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGA 36120 Query 155818 TTCAACTTCAACCAGTCTGTAGTAGACGCTAGTGGTAAAGTCATCCCTACATGGGCAGAC 155877 |||||||||||||||||||||||||| | | || || || |||||||| || Sbjct 36119 TTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGAT 36060 Query 155878 ATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 155937 || | ||||| ||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 36059 ATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 36000 Query 155938 CCTCTTGACCTTGC 155951 || ||||||||||| Sbjct 35999 CCACTTGACCTTGC 35986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584835061101640