Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq19 783 0.0 >seq19 Length=72585 Score = 783 bits (868), Expect = 0.0 Identities = 758/974 (78%), Gaps = 0/974 (0%) Strand=Plus/Minus Query 67362 GCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCT 67421 ||||||||||| ||||||||||||||||||||||||||||| |||||||| || || Sbjct 11157 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 11098 Query 67422 GCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGAT 67481 || | ||| | ||| || ||||| || ||| || || || || || || || Sbjct 11097 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 11038 Query 67482 TGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAAC 67541 |||||||||||||| ||||| |||||||| ||||||||||| | |||||| || |||||| Sbjct 11037 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 10978 Query 67542 CAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAA 67601 ||||| | | || || | || ||||||||||| || | |||||||||||| Sbjct 10977 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 10918 Query 67602 GATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTC 67661 || || || |||||||| | || |||||||| || || ||||| || |||||||||||| Sbjct 10917 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 10858 Query 67662 TCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTG 67721 ||||||||||||||||||||||| || ||| ||||| | ||||||||| || | | Sbjct 10857 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 10798 Query 67722 ATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACA 67781 || ||||| ||||| || || ||||||||||| ||| || |||||||||||||||||| Sbjct 10797 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 10738 Query 67782 CCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACG 67841 || || || |||||||| ||||||||||||||||||||||||||||| || ||||| ||| Sbjct 10737 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 10678 Query 67842 AACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGA 67901 | |||| |||| ||||| ||||||||||||||||||||| | |||||||||||||| ||| Sbjct 10677 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 10618 Query 67902 CCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACA 67961 |||| || || || | ||| ||||| |||||| | || ||||||||||| |||||| Sbjct 10617 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 10558 Query 67962 CAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCT 68021 |||||||||||||| || | |||| ||||||| ||||||| |||||| ||||| Sbjct 10557 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 10498 Query 68022 GTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCAC 68081 |||||||| | |||||| | || | ||| ||| |||| ||||| || || | |||| Sbjct 10497 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 10438 Query 68082 TCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTA 68141 ||||| |||| |||||||||||||| || ||||||||||| ||||| ||||| || || Sbjct 10437 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 10378 Query 68142 GGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCT 68201 || | ||||||||||| ||||||||||| |||||||| || || || | || || || Sbjct 10377 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 10318 Query 68202 CTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCT 68261 | ||||||||||||||| || ||||| || ||||| ||||| | |||||| | | | Sbjct 10317 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGAAGTT 10258 Query 68262 GCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGATTGTCA 68321 |||| || || ||| ||||| || || ||||||||||| | || | || || ||| Sbjct 10257 GCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTCA 10198 Query 68322 ACTGAGGTGACCCA 68335 ||| || | ||| Sbjct 10197 GTTGAAGTAATCCA 10184 Score = 783 bits (868), Expect = 0.0 Identities = 758/974 (78%), Gaps = 0/974 (0%) Strand=Plus/Plus Query 67362 GCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCT 67421 ||||||||||| ||||||||||||||||||||||||||||| |||||||| || || Sbjct 35986 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 36045 Query 67422 GCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGAT 67481 || | ||| | ||| || ||||| || ||| || || || || || || || Sbjct 36046 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 36105 Query 67482 TGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAAC 67541 |||||||||||||| ||||| |||||||| ||||||||||| | |||||| || |||||| Sbjct 36106 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 36165 Query 67542 CAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAA 67601 ||||| | | || || | || ||||||||||| || | |||||||||||| Sbjct 36166 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 36225 Query 67602 GATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTC 67661 || || || |||||||| | || |||||||| || || ||||| || |||||||||||| Sbjct 36226 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 36285 Query 67662 TCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTG 67721 ||||||||||||||||||||||| || ||| ||||| | ||||||||| || | | Sbjct 36286 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 36345 Query 67722 ATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACA 67781 || ||||| ||||| || || ||||||||||| ||| || |||||||||||||||||| Sbjct 36346 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 36405 Query 67782 CCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACG 67841 || || || |||||||| ||||||||||||||||||||||||||||| || ||||| ||| Sbjct 36406 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 36465 Query 67842 AACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGA 67901 | |||| |||| ||||| ||||||||||||||||||||| | |||||||||||||| ||| Sbjct 36466 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 36525 Query 67902 CCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACA 67961 |||| || || || | ||| ||||| |||||| | || ||||||||||| |||||| Sbjct 36526 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 36585 Query 67962 CAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCT 68021 |||||||||||||| || | |||| ||||||| ||||||| |||||| ||||| Sbjct 36586 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 36645 Query 68022 GTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCAC 68081 |||||||| | |||||| | || | ||| ||| |||| ||||| || || | |||| Sbjct 36646 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 36705 Query 68082 TCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTA 68141 ||||| |||| |||||||||||||| || ||||||||||| ||||| ||||| || || Sbjct 36706 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 36765 Query 68142 GGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCT 68201 || | ||||||||||| ||||||||||| |||||||| || || || | || || || Sbjct 36766 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 36825 Query 68202 CTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCT 68261 | ||||||||||||||| || ||||| || ||||| ||||| | |||||| | | | Sbjct 36826 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGAAGTT 36885 Query 68262 GCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGATTGTCA 68321 |||| || || ||| ||||| || || ||||||||||| | || | || || ||| Sbjct 36886 GCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTCA 36945 Query 68322 ACTGAGGTGACCCA 68335 ||| || | ||| Sbjct 36946 GTTGAAGTAATCCA 36959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566947065350040