Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_021071.1
Length=177211
Score E
Sequences producing significant alignments: (Bits) Value
seq19 783 0.0
>seq19
Length=72585
Score = 783 bits (868), Expect = 0.0
Identities = 758/974 (78%), Gaps = 0/974 (0%)
Strand=Plus/Minus
Query 67362 GCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCT 67421
||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 11157 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 11098
Query 67422 GCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGAT 67481
|| | ||| | ||| || ||||| || ||| || || || || || || ||
Sbjct 11097 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 11038
Query 67482 TGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAAC 67541
|||||||||||||| ||||| |||||||| ||||||||||| | |||||| || ||||||
Sbjct 11037 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 10978
Query 67542 CAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAA 67601
||||| | | || || | || ||||||||||| || | ||||||||||||
Sbjct 10977 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 10918
Query 67602 GATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTC 67661
|| || || |||||||| | || |||||||| || || ||||| || ||||||||||||
Sbjct 10917 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 10858
Query 67662 TCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTG 67721
||||||||||||||||||||||| || ||| ||||| | ||||||||| || | |
Sbjct 10857 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 10798
Query 67722 ATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACA 67781
|| ||||| ||||| || || ||||||||||| ||| || ||||||||||||||||||
Sbjct 10797 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 10738
Query 67782 CCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACG 67841
|| || || |||||||| ||||||||||||||||||||||||||||| || ||||| |||
Sbjct 10737 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 10678
Query 67842 AACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGA 67901
| |||| |||| ||||| ||||||||||||||||||||| | |||||||||||||| |||
Sbjct 10677 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 10618
Query 67902 CCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACA 67961
|||| || || || | ||| ||||| |||||| | || ||||||||||| ||||||
Sbjct 10617 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 10558
Query 67962 CAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCT 68021
|||||||||||||| || | |||| ||||||| ||||||| |||||| |||||
Sbjct 10557 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 10498
Query 68022 GTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCAC 68081
|||||||| | |||||| | || | ||| ||| |||| ||||| || || | ||||
Sbjct 10497 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 10438
Query 68082 TCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTA 68141
||||| |||| |||||||||||||| || ||||||||||| ||||| ||||| || ||
Sbjct 10437 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 10378
Query 68142 GGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCT 68201
|| | ||||||||||| ||||||||||| |||||||| || || || | || || ||
Sbjct 10377 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 10318
Query 68202 CTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCT 68261
| ||||||||||||||| || ||||| || ||||| ||||| | |||||| | | |
Sbjct 10317 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGAAGTT 10258
Query 68262 GCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGATTGTCA 68321
|||| || || ||| ||||| || || ||||||||||| | || | || || |||
Sbjct 10257 GCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTCA 10198
Query 68322 ACTGAGGTGACCCA 68335
||| || | |||
Sbjct 10197 GTTGAAGTAATCCA 10184
Score = 783 bits (868), Expect = 0.0
Identities = 758/974 (78%), Gaps = 0/974 (0%)
Strand=Plus/Plus
Query 67362 GCAAGGTCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCT 67421
||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||
Sbjct 35986 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 36045
Query 67422 GCTCTGTTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGAT 67481
|| | ||| | ||| || ||||| || ||| || || || || || || ||
Sbjct 36046 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 36105
Query 67482 TGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAAC 67541
|||||||||||||| ||||| |||||||| ||||||||||| | |||||| || ||||||
Sbjct 36106 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 36165
Query 67542 CAGATGCAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAA 67601
||||| | | || || | || ||||||||||| || | ||||||||||||
Sbjct 36166 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 36225
Query 67602 GATGCATACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTC 67661
|| || || |||||||| | || |||||||| || || ||||| || ||||||||||||
Sbjct 36226 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 36285
Query 67662 TCTTCTTCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTG 67721
||||||||||||||||||||||| || ||| ||||| | ||||||||| || | |
Sbjct 36286 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 36345
Query 67722 ATAAGAGAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACA 67781
|| ||||| ||||| || || ||||||||||| ||| || ||||||||||||||||||
Sbjct 36346 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 36405
Query 67782 CCTGCTACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACG 67841
|| || || |||||||| ||||||||||||||||||||||||||||| || ||||| |||
Sbjct 36406 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 36465
Query 67842 AACATGTAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGA 67901
| |||| |||| ||||| ||||||||||||||||||||| | |||||||||||||| |||
Sbjct 36466 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 36525
Query 67902 CCGAAAGGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACA 67961
|||| || || || | ||| ||||| |||||| | || ||||||||||| ||||||
Sbjct 36526 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 36585
Query 67962 CAGATCCAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCT 68021
|||||||||||||| || | |||| ||||||| ||||||| |||||| |||||
Sbjct 36586 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 36645
Query 68022 GTGATTCCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCAC 68081
|||||||| | |||||| | || | ||| ||| |||| ||||| || || | ||||
Sbjct 36646 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 36705
Query 68082 TCATCTAGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTA 68141
||||| |||| |||||||||||||| || ||||||||||| ||||| ||||| || ||
Sbjct 36706 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 36765
Query 68142 GGAACAACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCT 68201
|| | ||||||||||| ||||||||||| |||||||| || || || | || || ||
Sbjct 36766 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 36825
Query 68202 CTGATACCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCT 68261
| ||||||||||||||| || ||||| || ||||| ||||| | |||||| | | |
Sbjct 36826 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGAAGTT 36885
Query 68262 GCTGCGAGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGATTGTCA 68321
|||| || || ||| ||||| || || ||||||||||| | || | || || |||
Sbjct 36886 GCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTCA 36945
Query 68322 ACTGAGGTGACCCA 68335
||| || | |||
Sbjct 36946 GTTGAAGTAATCCA 36959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 566947065350040
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