Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_021072.1
Length=178807
Score E
Sequences producing significant alignments: (Bits) Value
seq19 765 0.0
>seq19
Length=72585
Score = 765 bits (848), Expect = 0.0
Identities = 757/976 (78%), Gaps = 2/976 (0%)
Strand=Plus/Minus
Query 67843 GCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCA 67902
|||||||| || ||||||||||| ||||||||||| ||||| ||||||||||| | |
Sbjct 11157 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 11098
Query 67903 GCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGAC 67962
|| ||||| | | || ||||| || | || || ||| | | ||||
Sbjct 11097 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 11038
Query 67963 TGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAAC 68022
|||||||||||||| || || |||||||| ||||| || || ||| | || ||||||
Sbjct 11037 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 10978
Query 68023 CAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAAC 68082
||||| || | || ||||| || ||||||||||| || ||||| |||||||||||
Sbjct 10977 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 10918
Query 68083 GATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTC 68142
|| || || |||||||| ||||| |||||||| || |||||||| || ||||||||||||
Sbjct 10917 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 10858
Query 68143 TCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGA 68202
||||||||||| ||||||||||| || ||| ||||| | ||||| || |||||
Sbjct 10857 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 10798
Query 68203 ACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACG 68262
| || || ||||| || || ||||| ||||||||| ||| || || ||||| |||||
Sbjct 10797 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 10738
Query 68263 CCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACC 68322
|||||||| || ||||| ||||| |||||||| |||||||||||||| || ||||| ||
Sbjct 10737 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 10678
Query 68323 AGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGA 68382
| |||| |||||||||| |||||||| || ||||||||| | |||||||| ||||| |||
Sbjct 10677 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 10618
Query 68383 CCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACA 68442
|||| || || || | ||| || || | ||||||||| ||||| |||||||| || |||
Sbjct 10617 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 10558
Query 68443 CAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCA 68502
|||||||||||||| || | ||| | ||||| ||||| ||||| |||||||||| |
Sbjct 10557 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 10498
Query 68503 AAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCAC 68562
| || || || | ||||||| | | | || ||| |||||||||| ||||| | ||||
Sbjct 10497 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 10438
Query 68563 TCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTA 68622
|||||||| | ||||||||||| || || || |||||||| || || || || || ||
Sbjct 10437 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 10378
Query 68623 GGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCA 68682
|| | ||||||||||| ||||||||||| || |||| |||||| |||| || || |||
Sbjct 10377 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 10318
Query 68683 CGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGATGGT 68741
|| ||||||||||| || ||||| |||||||| || || || |||||||| || || | |
Sbjct 10317 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGAAG-T 10259
Query 68742 TGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTTCTC 68801
||||| ||| | ||||||||||| | || ||||||||||| | |||||| ||||||||
Sbjct 10258 TGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTC 10199
Query 68802 TGTGGAAGTCACCCAT 68817
|| ||||| | ||||
Sbjct 10198 AGTTGAAGTAATCCAT 10183
Score = 765 bits (848), Expect = 0.0
Identities = 757/976 (78%), Gaps = 2/976 (0%)
Strand=Plus/Plus
Query 67843 GCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCA 67902
|||||||| || ||||||||||| ||||||||||| ||||| ||||||||||| | |
Sbjct 35986 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 36045
Query 67903 GCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGAC 67962
|| ||||| | | || ||||| || | || || ||| | | ||||
Sbjct 36046 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 36105
Query 67963 TGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAAC 68022
|||||||||||||| || || |||||||| ||||| || || ||| | || ||||||
Sbjct 36106 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 36165
Query 68023 CAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAAC 68082
||||| || | || ||||| || ||||||||||| || ||||| |||||||||||
Sbjct 36166 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 36225
Query 68083 GATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTC 68142
|| || || |||||||| ||||| |||||||| || |||||||| || ||||||||||||
Sbjct 36226 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 36285
Query 68143 TCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGA 68202
||||||||||| ||||||||||| || ||| ||||| | ||||| || |||||
Sbjct 36286 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 36345
Query 68203 ACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACG 68262
| || || ||||| || || ||||| ||||||||| ||| || || ||||| |||||
Sbjct 36346 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 36405
Query 68263 CCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACC 68322
|||||||| || ||||| ||||| |||||||| |||||||||||||| || ||||| ||
Sbjct 36406 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 36465
Query 68323 AGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGA 68382
| |||| |||||||||| |||||||| || ||||||||| | |||||||| ||||| |||
Sbjct 36466 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 36525
Query 68383 CCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACA 68442
|||| || || || | ||| || || | ||||||||| ||||| |||||||| || |||
Sbjct 36526 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 36585
Query 68443 CAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCA 68502
|||||||||||||| || | ||| | ||||| ||||| ||||| |||||||||| |
Sbjct 36586 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 36645
Query 68503 AAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCAC 68562
| || || || | ||||||| | | | || ||| |||||||||| ||||| | ||||
Sbjct 36646 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 36705
Query 68563 TCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTA 68622
|||||||| | ||||||||||| || || || |||||||| || || || || || ||
Sbjct 36706 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 36765
Query 68623 GGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCA 68682
|| | ||||||||||| ||||||||||| || |||| |||||| |||| || || |||
Sbjct 36766 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 36825
Query 68683 CGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGATGGT 68741
|| ||||||||||| || ||||| |||||||| || || || |||||||| || || ||
Sbjct 36826 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGA-AGT 36884
Query 68742 TGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTTCTC 68801
||||| ||| | ||||||||||| | || ||||||||||| | |||||| ||||||||
Sbjct 36885 TGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTC 36944
Query 68802 TGTGGAAGTCACCCAT 68817
|| ||||| | ||||
Sbjct 36945 AGTTGAAGTAATCCAT 36960
Score = 562 bits (622), Expect = 3e-155
Identities = 743/1028 (72%), Gaps = 2/1028 (0%)
Strand=Plus/Minus
Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645
||||||| || || ||||| || || || || || |||||||||| ||||||||| || |
Sbjct 3012 ATTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGAGGCT 2953
Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705
|||| || ||||| ||||||||||| |||||| || | ||||| ||||| |||||||
Sbjct 2952 GATCTTGAGCTGCCATCCATGCACGAATACCTTCGTTAAGAAGAATATTCTTAGTGTAGA 2893
Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765
| || || ||||| || ||||| ||||| | ||||||||| ||||| ||||| || ||||
Sbjct 2892 ATGTTTCAAACTCAGGATCTTCAGCTGCACGGATCTCTTGTGATACGAAGTCGTATGCAC 2833
Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825
| ||||| || || | || | || ||| | | |||| | || | ||||| |
Sbjct 2832 GGAGGTTAAGTGCTAATCCTACAACACCAAGTGCTGACATCCATAACCCTGTTACAGGTA 2773
Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885
| || | ||||||||| || | ||| | ||| || || || | ||| || ||||| |
Sbjct 2772 CGAAAAGCATAAAGAAGTGAAGCCAACGCTTGTTAGAGAAAGCTACACCGAAAATCTGTG 2713
Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945
||||||| |||||||| || |||||||||||||| ||||| ||||||| | || ||||
Sbjct 2712 ACCAGAAACGGTTTGCTGTTACCATTGAGTAAGTCTCTTCAGCTTGAGTTGGGTTAAATG 2653
Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005
| ||||||||||| ||||||||||| | || || |||||||| || | || |
Sbjct 2652 CACGGAAAGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTCTCTACAGTTGCTCCGT 2593
Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065
|||| ||| |||| | ||| | || || | ||| ||||| |||||||| || || ||||
Sbjct 2592 GAATCGCACAAAGAAGTGCTGCTCCAAGTACACCAGCTACTCCCATCATGTGGAATGGGT 2533
Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125
| | |||||||| ||||| ||||| | ||| |||| ||| || || ||| | | || |
Sbjct 2532 TAAGTGTCCAGTTGTGGAACCCTTGGAAGAAAAGAATGAAACGGAAAATTCCCGCTACAC 2473
Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185
| || || || || || ||||| | ||||| || || ||||| || || || ||| |
Sbjct 2472 CAAATGAAGGTGCAAAGAACCATCCTGATTGTCCAAGTGGGTAAATAAGGAATACAGATA 2413
Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGAC 67245
|||| ||||||||||| | ||||| ||||| || ||||| ||||| || | ||
Sbjct 2412 CAAATACAGCGATAGGTGCTGAGAATGCAATCGCGTTGTACGGACGAATTTGTACTGCAC 2353
Query 67246 GTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCA 67305
|||| | |||||| || || ||||| || || |||| |||| || ||||| || || |
Sbjct 2352 GTGCAATTTCAAATTGACGGAGCATAAATCCGATTAATCCGAATGCACCGTGAAGTGCTA 2293
Query 67306 CAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGAC 67365
| || |||| | ||| ||||| || ||| || ||| || || || | || || |
Sbjct 2292 CGAATGTCCATAATCCACCAAGCTGACACCAACGTGTGAACTCACCTTGTGCTTCTGGTC 2233
Query 67366 CCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTGA 67425
||||||| |||||||| || ||| ||||| | || || ||||| || |||| ||| |
Sbjct 2232 CCCAAAGGAGAAGAAGTGAGTGAGCCATACTGTTAGATGGTGTTGATACTGCCGATGTAA 2173
Query 67426 GAAAATTAGCACCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACAA 67485
| || ||| |||||||| || | || | ||||| |||||||| || || |
Sbjct 2172 GGAAGTTACATCCCTCAAGGTATGAACTTGCTAAACCGTGTGTGTACCATGAAGTTACGA 2113
Query 67486 ACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAG-TGGGAAAAAGAAGTAGT 67544
| || || ||||||| ||| ||||||| ||| | || ||| |||||| || || | |
Sbjct 2112 ATGTTGTTCCAGTAAACCATCCACCAACTGCAAAGTATGCACATGGGAATAATAAA-ATT 2054
Query 67545 CCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATCAAGGACATCGAAC 67604
|| |||||||| || || || || ||||| || ||||||||||| || | | || |||
Sbjct 2053 CCTGACCAACCTACGAATACGAAACGATCACGCTTAAGCCAGTCGTCTACGTTGTCAAAC 1994
Query 67605 CACCCCCG 67612
|| || ||
Sbjct 1993 CATCCGCG 1986
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570
|||||||| ||||||||||||| ||||||||| ||||||| |||| ||||| || |||
Sbjct 58964 CTCCCCAGACAGGATTTGAACCTGTGACCAATCGGTTAACAGCCGATCGCTCTACCACTG 58905
Query 35571 AGCTACTGAGGA 35582
||||||||||||
Sbjct 58904 AGCTACTGAGGA 58893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572054264137080
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