Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq19 765 0.0 >seq19 Length=72585 Score = 765 bits (848), Expect = 0.0 Identities = 757/976 (78%), Gaps = 2/976 (0%) Strand=Plus/Minus Query 67843 GCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCA 67902 |||||||| || ||||||||||| ||||||||||| ||||| ||||||||||| | | Sbjct 11157 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 11098 Query 67903 GCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGAC 67962 || ||||| | | || ||||| || | || || ||| | | |||| Sbjct 11097 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 11038 Query 67963 TGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAAC 68022 |||||||||||||| || || |||||||| ||||| || || ||| | || |||||| Sbjct 11037 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 10978 Query 68023 CAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAAC 68082 ||||| || | || ||||| || ||||||||||| || ||||| ||||||||||| Sbjct 10977 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 10918 Query 68083 GATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTC 68142 || || || |||||||| ||||| |||||||| || |||||||| || |||||||||||| Sbjct 10917 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 10858 Query 68143 TCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGA 68202 ||||||||||| ||||||||||| || ||| ||||| | ||||| || ||||| Sbjct 10857 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 10798 Query 68203 ACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACG 68262 | || || ||||| || || ||||| ||||||||| ||| || || ||||| ||||| Sbjct 10797 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 10738 Query 68263 CCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACC 68322 |||||||| || ||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct 10737 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 10678 Query 68323 AGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGA 68382 | |||| |||||||||| |||||||| || ||||||||| | |||||||| ||||| ||| Sbjct 10677 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 10618 Query 68383 CCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACA 68442 |||| || || || | ||| || || | ||||||||| ||||| |||||||| || ||| Sbjct 10617 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 10558 Query 68443 CAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCA 68502 |||||||||||||| || | ||| | ||||| ||||| ||||| |||||||||| | Sbjct 10557 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 10498 Query 68503 AAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCAC 68562 | || || || | ||||||| | | | || ||| |||||||||| ||||| | |||| Sbjct 10497 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 10438 Query 68563 TCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTA 68622 |||||||| | ||||||||||| || || || |||||||| || || || || || || Sbjct 10437 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 10378 Query 68623 GGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCA 68682 || | ||||||||||| ||||||||||| || |||| |||||| |||| || || ||| Sbjct 10377 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 10318 Query 68683 CGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGATGGT 68741 || ||||||||||| || ||||| |||||||| || || || |||||||| || || | | Sbjct 10317 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGAAG-T 10259 Query 68742 TGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTTCTC 68801 ||||| ||| | ||||||||||| | || ||||||||||| | |||||| |||||||| Sbjct 10258 TGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTC 10199 Query 68802 TGTGGAAGTCACCCAT 68817 || ||||| | |||| Sbjct 10198 AGTTGAAGTAATCCAT 10183 Score = 765 bits (848), Expect = 0.0 Identities = 757/976 (78%), Gaps = 2/976 (0%) Strand=Plus/Plus Query 67843 GCAAGGTCGAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATACCCAAACCA 67902 |||||||| || ||||||||||| ||||||||||| ||||| ||||||||||| | | Sbjct 35986 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 36045 Query 67903 GCGCGGTTGAGAACGTCTGCCCAGGTAGGCAGAACCTTACCAGAACTATCAAGGATAGAC 67962 || ||||| | | || ||||| || | || || ||| | | |||| Sbjct 36046 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 36105 Query 67963 TGGTTGAAGTTGAAACCATTCAGGTTGAATGCCATGGTGCTAACACCAAGTGCAGTGAAC 68022 |||||||||||||| || || |||||||| ||||| || || ||| | || |||||| Sbjct 36106 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 36165 Query 68023 CAGATACCAACGACAGGCCATGCAGCAAGGAAGAAGTGCAGCGAACGGGAGTTGTTGAAC 68082 ||||| || | || ||||| || ||||||||||| || ||||| ||||||||||| Sbjct 36166 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 36225 Query 68083 GATGCATACTGGAAGATCAGACGACCGAAGTATCCATGTGCAGCAACAATGTTGTAAGTC 68142 || || || |||||||| ||||| |||||||| || |||||||| || |||||||||||| Sbjct 36226 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 36285 Query 68143 TCTTCTTCTTGACCGAACTTGTAACCATAGTTCTGGGACTCAGTTTCAGTGGTTTCACGA 68202 ||||||||||| ||||||||||| || ||| ||||| | ||||| || ||||| Sbjct 36286 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 36345 Query 68203 ACCAGTGAAGAAGTAACCAGGGAACCATGCATTGCACTGAACAGAGATCCACCAAATACG 68262 | || || ||||| || || ||||| ||||||||| ||| || || ||||| ||||| Sbjct 36346 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 36405 Query 68263 CCAGCAACGCCGAGCATATGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAACACC 68322 |||||||| || ||||| ||||| |||||||| |||||||||||||| || ||||| || Sbjct 36406 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 36465 Query 68323 AGCATGTAGTTGAAAGTACCAGAAATGCCGAGAGGCATTGCGTCAGAGAACGAACCTTGA 68382 | |||| |||||||||| |||||||| || ||||||||| | |||||||| ||||| ||| Sbjct 36466 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 36525 Query 68383 CCGAAAGGATAGACCAGGAAGACTGCGGATGCTGCTGCAACAGGTGCAGAGTATGCAACA 68442 |||| || || || | ||| || || | ||||||||| ||||| |||||||| || ||| Sbjct 36526 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 36585 Query 68443 CAGATCCAAGGACGCATACCAAGACGATAGGAAAGTTCCCATTCACGTCCCATGTATGCA 68502 |||||||||||||| || | ||| | ||||| ||||| ||||| |||||||||| | Sbjct 36586 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 36645 Query 68503 AAGATACCAATCAGGAAGTGAAAGATTACGAGTTGGAAAGGACCACCATTGTACAACCAC 68562 | || || || | ||||||| | | | || ||| |||||||||| ||||| | |||| Sbjct 36646 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 36705 Query 68563 TCATCAAGGGTTGCTGCTTCCCAAATGGGATAAAAGTGAAGACCAATTGCATTTGAACTA 68622 |||||||| | ||||||||||| || || || |||||||| || || || || || || Sbjct 36706 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 36765 Query 68623 GGAACAACAGCACCAGAAATGATGTTGTTACCATACAGAAGTGAACCAGCAACAGGTTCA 68682 || | ||||||||||| ||||||||||| || |||| |||||| |||| || || ||| Sbjct 36766 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 36825 Query 68683 CGAATACCATCGATGTCCACAGGGGGAGCAGCGATGAAGGCGACGATGAA-ACAGATGGT 68741 || ||||||||||| || ||||| |||||||| || || || |||||||| || || || Sbjct 36826 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGA-AGT 36884 Query 68742 TGCTGCAAGCAGCGTAGGGATCATCAGGACGCCGAACCAACCAACGTAAAGGCGGTTCTC 68801 ||||| ||| | ||||||||||| | || ||||||||||| | |||||| |||||||| Sbjct 36885 TGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTC 36944 Query 68802 TGTGGAAGTCACCCAT 68817 || ||||| | |||| Sbjct 36945 AGTTGAAGTAATCCAT 36960 Score = 562 bits (622), Expect = 3e-155 Identities = 743/1028 (72%), Gaps = 2/1028 (0%) Strand=Plus/Minus Query 66586 ATTAAAGTGCATTACCACGGGGCAGAACTTCTTCTGGGAATACAAAGTTTTCATGCGGTT 66645 ||||||| || || ||||| || || || || || |||||||||| ||||||||| || | Sbjct 3012 ATTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGAGGCT 2953 Query 66646 GATCGATAGGTGCCAACCATGCACGAAGACCTTCATTCAATAGAATGTTCTTTGTGTAGA 66705 |||| || ||||| ||||||||||| |||||| || | ||||| ||||| ||||||| Sbjct 2952 GATCTTGAGCTGCCATCCATGCACGAATACCTTCGTTAAGAAGAATATTCTTAGTGTAGA 2893 Query 66706 ACGTCTCGAACTCTGGGTCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCAC 66765 | || || ||||| || ||||| ||||| | ||||||||| ||||| ||||| || |||| Sbjct 2892 ATGTTTCAAACTCAGGATCTTCAGCTGCACGGATCTCTTGTGATACGAAGTCGTATGCAC 2833 Query 66766 GAAGGTTGAGAGCAAGACCAATAATACCGATGGAACTTGTCCAAAGACCCATAACAGGAA 66825 | ||||| || || | || | || ||| | | |||| | || | ||||| | Sbjct 2832 GGAGGTTAAGTGCTAATCCTACAACACCAAGTGCTGACATCCATAACCCTGTTACAGGTA 2773 Query 66826 CAAACAACATAAAGAAATGCAACCACCTCTTATTGCTAAACGCAATACCAAAGATCTGAG 66885 | || | ||||||||| || | ||| | ||| || || || | ||| || ||||| | Sbjct 2772 CGAAAAGCATAAAGAAGTGAAGCCAACGCTTGTTAGAGAAAGCTACACCGAAAATCTGTG 2713 Query 66886 ACCAGAAGCGGTTTGCAGTAACCATTGAGTAAGTTTCTTCCTCTTGAGTAGAGTCGAATG 66945 ||||||| |||||||| || |||||||||||||| ||||| ||||||| | || |||| Sbjct 2712 ACCAGAAACGGTTTGCTGTTACCATTGAGTAAGTCTCTTCAGCTTGAGTTGGGTTAAATG 2653 Query 66946 CTTTGAAAGTGTTTGCTTGTTCACCATCTTCATACAGAGTATTCTCTACTGTAACACCAT 67005 | ||||||||||| ||||||||||| | || || |||||||| || | || | Sbjct 2652 CACGGAAAGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTCTCTACAGTTGCTCCGT 2593 Query 67006 GAATGGCAGAAAGCAATGCACCACCCAGGATACCTGCTACACCCATCATATGAAACGGGT 67065 |||| ||| |||| | ||| | || || | ||| ||||| |||||||| || || |||| Sbjct 2592 GAATCGCACAAAGAAGTGCTGCTCCAAGTACACCAGCTACTCCCATCATGTGGAATGGGT 2533 Query 67066 TCAAGGTCCAGTTATGGAATCCTTGTAGGAAGAGAAGGAATCGAAAGATTGCTGAGACCC 67125 | | |||||||| ||||| ||||| | ||| |||| ||| || || ||| | | || | Sbjct 2532 TAAGTGTCCAGTTGTGGAACCCTTGGAAGAAAAGAATGAAACGGAAAATTCCCGCTACAC 2473 Query 67126 CGAAAGATGGAGCGAAAAACCAACTCGATTGACCCAGAGGGTAGATGAGAAAGACACTAA 67185 | || || || || || ||||| | ||||| || || ||||| || || || ||| | Sbjct 2472 CAAATGAAGGTGCAAAGAACCATCCTGATTGTCCAAGTGGGTAAATAAGGAATACAGATA 2413 Query 67186 CAAAAACAGCGATAGGACCAGAGAACGCAATAGCATTGTAGGGACGGATACCGATGAGAC 67245 |||| ||||||||||| | ||||| ||||| || ||||| ||||| || | || Sbjct 2412 CAAATACAGCGATAGGTGCTGAGAATGCAATCGCGTTGTACGGACGAATTTGTACTGCAC 2353 Query 67246 GTGCCAGTTCAAACTGGCGAAGCATGAAACCAATTAGAGCGAAAGCCCCGTGGAGCGCCA 67305 |||| | |||||| || || ||||| || || |||| |||| || ||||| || || | Sbjct 2352 GTGCAATTTCAAATTGACGGAGCATAAATCCGATTAATCCGAATGCACCGTGAAGTGCTA 2293 Query 67306 CAAAATTCCAGAGTCCTCCAAGTTGGATCCAGCGGACGAAATCCCCCTGAGACTCAGGAC 67365 | || |||| | ||| ||||| || ||| || ||| || || || | || || | Sbjct 2292 CGAATGTCCATAATCCACCAAGCTGACACCAACGTGTGAACTCACCTTGTGCTTCTGGTC 2233 Query 67366 CCCAAAGTAGAAGAAGAGAATGACCCATAGCATCAGCAGGCGTTGACACAGCCGCTGTGA 67425 ||||||| |||||||| || ||| ||||| | || || ||||| || |||| ||| | Sbjct 2232 CCCAAAGGAGAAGAAGTGAGTGAGCCATACTGTTAGATGGTGTTGATACTGCCGATGTAA 2173 Query 67426 GAAAATTAGCACCCTCAAGATAACTAGACGCGAGTCCGTGAGTGTACCAGCTTGTGACAA 67485 | || ||| |||||||| || | || | ||||| |||||||| || || | Sbjct 2172 GGAAGTTACATCCCTCAAGGTATGAACTTGCTAAACCGTGTGTGTACCATGAAGTTACGA 2113 Query 67486 ACGTAGTACCAGTAAGCCAGCCACCAATTGCCATATAAGCAG-TGGGAAAAAGAAGTAGT 67544 | || || ||||||| ||| ||||||| ||| | || ||| |||||| || || | | Sbjct 2112 ATGTTGTTCCAGTAAACCATCCACCAACTGCAAAGTATGCACATGGGAATAATAAA-ATT 2054 Query 67545 CCAGACCAACCCACAAAGACAAAGCGATCTCGTTTAAGCCAGTCATCAAGGACATCGAAC 67604 || |||||||| || || || || ||||| || ||||||||||| || | | || ||| Sbjct 2053 CCTGACCAACCTACGAATACGAAACGATCACGCTTAAGCCAGTCGTCTACGTTGTCAAAC 1994 Query 67605 CACCCCCG 67612 || || || Sbjct 1993 CATCCGCG 1986 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 35511 CTCCCCAGGTAGGATTTGAACCTACGACCAATCGATTAACAGTCGATAGCTCTGCCGCTG 35570 |||||||| ||||||||||||| ||||||||| ||||||| |||| ||||| || ||| Sbjct 58964 CTCCCCAGACAGGATTTGAACCTGTGACCAATCGGTTAACAGCCGATCGCTCTACCACTG 58905 Query 35571 AGCTACTGAGGA 35582 |||||||||||| Sbjct 58904 AGCTACTGAGGA 58893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572054264137080