Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq7 122 3e-22
seq3 91.5 4e-13
>seq7
Length=1394110
Score = 122 bits (134), Expect = 3e-22
Identities = 198/280 (71%), Gaps = 4/280 (1%)
Strand=Plus/Minus
Query 302566 ATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTT 302625
|| ||||| ||||| ||| | | || | ||| || ||||| || || || |||
Sbjct 444912 ATGATGTCCTCCATCGCCTTCACCAGTCGCCTCTGGATGTAACCCGTCTCGGACGTCTTT 444853
Query 302626 ACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGT 302685
|| || || || || ||||| | ||||| ||||| || |||||||| | ||| | |||
Sbjct 444852 ACCGCGGTGTCGATGAGACCCTCGCGACCGCCCATGGCGTGGAAGAAGAACTCCTGCGG- 444794
Query 302686 CGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC-GGGCGAATCGTCGA 302743
||| || || | | ||||| |||| || || || || ||||| |||| | ||||
Sbjct 444793 CGTGAGGCCGCGCAGGTAGGAGTTCTCGACAAACCCGCGAGCCTCAGGGCCGAG-GTCGT 444735
Query 302744 ACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAA 302803
||| | |||||| ||||| | ||||| | ||| | ||||| ||||| || || |
Sbjct 444734 TCTTCGCAAAGTGCGGCAGCGACCTGTCGGTGAACCCGAACGGGATGCGCTTACCCTCGA 444675
Query 302804 CGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|||||||||| |||| ||||| ||||||||||| || ||
Sbjct 444674 CGTTCTGCTGGCCCACGCACGCGATCATCTGCGAGATGTT 444635
>seq3
Length=1759951
Score = 91.5 bits (100), Expect = 4e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 252490 ACAAGCGGTCTCATCGGGTAAGATAGAACATATGCTGTCTTATCCATCCTATTATCATAA 252549
|| ||||| || |||||| | || || ||||| | | ||||| | | | | | |
Sbjct 811215 ACCAGCGGCTTCTGCGGGTAGAAAAGGACGTATGCCAGCGTGTCCATGCGAATCTGAAAG 811156
Query 252550 TTTGTAACATACATACCAAGCGCCTGCTTTCCCATAGCACTCTGGTAAGTATTTCTGGGA 252609
|| || || ||||| || | |||||||| ||||| |||||||||||||| || | ||
Sbjct 811155 TTGGTCACGTACATGCCCATGGCCTGCTTACCCATCGCACTCTGGTAAGTGTTACGCGGG 811096
Query 252610 GACTGATTGTTTTCCGGGAAAGGAATGCATGATGCTACAACACCGAAGATAGTGCTTGGG 252669
|||||||||| |||||||| |||||| || || | |||| ||| || |||
Sbjct 811095 GACTGATTGTGGTCCGGGAAGGGAATGATCGAGGCGCAGATGCCGAGGATCATGGAGGGG 811036
Query 252670 TGAATTTCACAGTGACTGTA 252689
|| || || ||||| ||||
Sbjct 811035 TGGATCTCGCAGTGGGTGTA 811016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817241704403
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |