Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq19 847 0.0 >seq19 Length=72585 Score = 847 bits (938), Expect = 0.0 Identities = 782/986 (79%), Gaps = 6/986 (1%) Strand=Plus/Plus Query 150839 TTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCTG 150898 |||||| ||| |||| || ||| | |||||||| || ||||||||||||| || | Sbjct 10175 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 10234 Query 150899 ATGATTCCAACTCTGTTGGCAGCAAC--CATTTGCTTCATCGTGGCATTCATCGCTGCTC 150956 ||||| || ||| | | ||||||| || | |||||||| ||||| || ||||||| Sbjct 10235 ATGATCCCTACTTTACTTACAGCAACTTCAGT--ATTCATCGTAGCATTTATTGCTGCTC 10292 Query 150957 CCCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACA 151016 | ||||| || |||||||| |||||||| || || |||| || || |||||||| |||| Sbjct 10293 CTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACA 10352 Query 151017 ACATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCA 151076 ||||||||||||||||||| | ||| | |||||||||||||| || |||||||| || | Sbjct 10353 ACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAA 10412 Query 151077 TCTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 151136 ||||||||||||| ||||| ||||| ||||| |||||||||||||||| ||| || | | Sbjct 10413 TCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCG 10472 Query 151137 TCTTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACC 151196 | | |||||| | || || || | | | |||||||||||||||||||| || |||| || Sbjct 10473 TATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCC 10532 Query 151197 GCTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGT 151255 | || || |||||||| ||||| ||| || || ||||||||||| || || || || | Sbjct 10533 GTTTAGGAATGCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACA 10591 Query 151256 GCAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGT 151315 || || ||| |||| || || ||||||| |||||||||||||||| |||||| || ||| Sbjct 10592 GCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGT 10651 Query 151316 ATTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCAC 151375 |||||||| || ||||||| |||| | || ||||| || ||||||||||| || |||||| Sbjct 10652 ATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCAC 10711 Query 151376 CCCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCAC 151435 || ||||| ||||||||||| |||||||| |||||||| || || ||||| ||||||||| Sbjct 10712 CCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCAC 10771 Query 151436 GGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTAT 151495 ||||| || || ||||| || || | |||||||| || || |||||||| ||| Sbjct 10772 GGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCA 10831 Query 151496 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTT 151555 || ||||||||||| |||||||||||||| ||||||||||| || |||||||||||||| Sbjct 10832 GGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTC 10891 Query 151556 GGTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTC 151615 || ||||| ||||||||||||||||| |||||||| || ||||| || |||||||||||| Sbjct 10892 GGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTC 10951 Query 151616 GCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTC 151675 ||| ||||| || | || ||||||||||| || | ||| | || ||||| ||| Sbjct 10952 GCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTC 11011 Query 151676 AACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAAC 151735 ||||| ||||| ||||||||||||||||| | | ||| | || || | ||| Sbjct 11012 AACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAAC 11071 Query 151736 ACCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAAT 151795 || ||||| || | | |||||||| || ||||||||||| |||||||||||||| Sbjct 11072 ACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAAC 11131 Query 151796 GCTCACAACTTCCCTCTCGACCTTGC 151821 |||||||||||||| || |||||||| Sbjct 11132 GCTCACAACTTCCCACTTGACCTTGC 11157 Score = 847 bits (938), Expect = 0.0 Identities = 782/986 (79%), Gaps = 6/986 (1%) Strand=Plus/Minus Query 150839 TTTTGTGACTGGGTTACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTGCTG 150898 |||||| ||| |||| || ||| | |||||||| || ||||||||||||| || | Sbjct 36968 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 36909 Query 150899 ATGATTCCAACTCTGTTGGCAGCAAC--CATTTGCTTCATCGTGGCATTCATCGCTGCTC 150956 ||||| || ||| | | ||||||| || | |||||||| ||||| || ||||||| Sbjct 36908 ATGATCCCTACTTTACTTACAGCAACTTCAGTA--TTCATCGTAGCATTTATTGCTGCTC 36851 Query 150957 CCCCTGTGGACATCGATGGCATCCGTGAACCCGTTGCTGGTTCTCTGATGTACGGTAACA 151016 | ||||| || |||||||| |||||||| || || |||| || || |||||||| |||| Sbjct 36850 CTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACA 36791 Query 151017 ACATCATCTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATCGGTCTGCACTTCTATCCCA 151076 ||||||||||||||||||| | ||| | |||||||||||||| || |||||||| || | Sbjct 36790 ACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAA 36731 Query 151077 TCTGGGAAGCAGCCTCTCTCGATGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 151136 ||||||||||||| ||||| ||||| ||||| |||||||||||||||| ||| || | | Sbjct 36730 TCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCG 36671 Query 151137 TCTTCCACTTCCTGATTGGTATCTATGCTTACATGGGTCGTGAGTGGGAACTGTCTTACC 151196 | | |||||| | || || || | | | |||||||||||||||||||| || |||| || Sbjct 36670 TATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCC 36611 Query 151197 GCTTGGGTATGCGTCCCTGGATCTGC-GTTGCATACTCTGCTCCAGTTGCTGCTGCGAGT 151255 | || || |||||||| ||||| ||| || || ||||||||||| || || || || | Sbjct 36610 GTTTAGGAATGCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACA 36552 Query 151256 GCAGTGTTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCCCTGGGT 151315 || || ||| |||| || || ||||||| |||||||||||||||| |||||| || ||| Sbjct 36551 GCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGT 36492 Query 151316 ATTTCTGGCACATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCAC 151375 |||||||| || ||||||| |||| | || ||||| || ||||||||||| || |||||| Sbjct 36491 ATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCAC 36432 Query 151376 CCCTTCCATATGCTTGGTGTGGCTGGTGTCTTCGGTGGATCGCTCTTCTCGGCAATGCAC 151435 || ||||| ||||||||||| |||||||| |||||||| || || ||||| ||||||||| Sbjct 36431 CCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCAC 36372 Query 151436 GGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAACGAGTCCCAGAACTAT 151495 ||||| || || ||||| || || | |||||||| || || |||||||| ||| Sbjct 36371 GGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCA 36312 Query 151496 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCACACGGTTACTTT 151555 || ||||||||||| |||||||||||||| ||||||||||| || |||||||||||||| Sbjct 36311 GGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTC 36252 Query 151556 GGTCGTCTCATCTTCCAATACGCTTCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTC 151615 || ||||| ||||||||||||||||| |||||||| || ||||| || |||||||||||| Sbjct 36251 GGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTC 36192 Query 151616 GCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCAGCACCATGGCATTC 151675 ||| ||||| || | || ||||||||||| || | ||| | || ||||| ||| Sbjct 36191 GCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTC 36132 Query 151676 AACCTGAACGGTTTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAAC 151735 ||||| ||||| ||||||||||||||||| | | ||| | || || | ||| Sbjct 36131 AACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAAC 36072 Query 151736 ACCTGGGCAGACGTTCTGAACCGTGCAGGTCTGGGTATGGAAGTTATGCACGAGCGTAAT 151795 || ||||| || | | |||||||| || ||||||||||| |||||||||||||| Sbjct 36071 ACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAAC 36012 Query 151796 GCTCACAACTTCCCTCTCGACCTTGC 151821 |||||||||||||| || |||||||| Sbjct 36011 GCTCACAACTTCCCACTTGACCTTGC 35986 Score = 574 bits (636), Expect = 5e-159 Identities = 741/1020 (73%), Gaps = 2/1020 (0%) Strand=Plus/Plus Query 152353 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAGAGAGACCGTTTCGTTTTTGTTGGTTGG 152412 || |||||||| | | || |||||||||||| | || |||||||| || || |||||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 152413 TCTGGACTTCTTCTTTTTCCCA-CTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 152471 || ||| || || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 152472 TACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAA 152531 || |||| || ||||| || ||||| || |||||||| || || ||||| || Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 152532 CTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTTCTGCTTCT 152591 ||| ||||| ||||||| || || ||| | | ||||| ||| || ||||| || || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 152592 CTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGATGGATTCAGCTCGGAGGACTCTGGGC 152651 ||||| || || || ||||| || ||| | ||| |||||| || ||| | ||| | Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 152652 TTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATCGGTTTCATGCTTCGCCAGTTTGAACT 152711 || || || || ||||| || |||| ||||||| || ||||| || || |||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 152712 GGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGT 152771 |||||| | || ||||| ||||| || ||||| ||||| | ||||||||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 152772 TTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATC 152831 ||||| || || || || ||||| || || ||||| | ||||| || || || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 152832 TTTCGGGGTCGCAGCAATCTTCCGATTCCTTCTCTTCCTTCAAGGATTCCACAACTGGAC 152891 || || || || | ||| ||||| ||| |||| ||| | ||||| |||||||||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 152892 ATTGAATCCGTTTCATATGATGGGTGTTGCAGGTATTTTGGGAGGGGCCTTGCTTTCTGC 152951 | | || || || || |||||||| || || ||| | | |||| || | |||| ||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 152952 CATTCATGGTGTTACAGTAGAGAATACTTTGTATCAAGATGGTGAACAAGCAAACACTTT 153011 ||||| || | || |||||||| || | | |||||||||| |||||||||| Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 153012 CAAAGCTTTCGACAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTT 153071 | || || || ||||||| |||||||| || || ||||| || || |||||||| Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 153072 CTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCT 153131 |||||| ||||| || || | ||||| || || || |||||||| ||||||||||| Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 153132 GTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAA 153191 || |||||||| | || | |||| || | |||| | | || | || || || Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 153192 TCTTCGTGCTTACGATTTTGTATCTCAAGAAATCAGGGCGTCAGAAGATCCTGAATTTGA 153251 || ||||| ||||| || ||||| ||||| ||| | || | ||||||||||| ||||| Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 153252 GACGTTCTATACGAAGAATATCCTTTTGAACGAAGGTCTTCGTGCTTGGTTGGCACCTGT 153311 || ||||| || |||||||| ||| | ||||||||| ||||||| ||| ||||| || Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947 Query 153312 TGACCAACCTCATGAGAACTTCGTGTTCCCTGAAGAGGTATTGCCACGAGGCAACGCTCT 153371 || || |||||||| ||| | || |||||||| |||||| | ||||| || |||||||| Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549622269464680