Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_021559.1
Length=179063
Score E
Sequences producing significant alignments: (Bits) Value
seq19 715 0.0
>seq19
Length=72585
Score = 715 bits (792), Expect = 0.0
Identities = 757/996 (76%), Gaps = 1/996 (0%)
Strand=Plus/Plus
Query 72227 GGGACGAGTTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTG 72286
|||||| |||||| ||| | || || ||||| || || | ||| | |||||||| |
Sbjct 10168 GGGACGT-TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCG 10226
Query 72287 GTGTCTTAATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCG 72346
| || ||||||||||| | | || || || || | ||||| |||||||| || |
Sbjct 10227 GAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTG 10286
Query 72347 CTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATG 72406
|||||||||| || |||||||| || ||| | || ||||| | || || | | || |
Sbjct 10287 CTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACG 10346
Query 72407 GTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCT 72466
| |||||||||||||||||||||||| | || | || ||||| || ||| | |||||||
Sbjct 10347 GAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCT 10406
Query 72467 ATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGT 72526
| || |||||||||||||| || | || |||||| | || ||||| ||||||||||||
Sbjct 10407 ACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGC 10466
Query 72527 TAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTAT 72586
| | | | |||||| | || ||||| | | | ||||||||| | ||||||| || |
Sbjct 10467 TTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTT 10526
Query 72587 CATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAG 72646
| | | | |||||||| | |||||||| |||||| ||||| || |||||| | ||||
Sbjct 10527 CTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAG 10586
Query 72647 CATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCAC 72706
|| || |||||| | || || ||| ||||||||||||| ||||||||||| ||||| |
Sbjct 10587 CAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTC 10646
Query 72707 TAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAA 72766
| ||||| || || || |||||||||||| |||| ||||| || || |||||||| || |
Sbjct 10647 TTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTA 10706
Query 72767 TGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAA 72826
||||||| ||||| ||| ||||| || ||| | ||||||||| || ||| |||||
Sbjct 10707 TGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAA 10766
Query 72827 TGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAA 72886
||||||||||||| || ||||||||||| ||| | ||||| || ||||||||| | ||
Sbjct 10767 TGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAA 10826
Query 72887 ACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGAT 72946
|| || || |||||||||||||||||||| || || ||||| || ||||| || || |
Sbjct 10827 ACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTT 10886
Query 72947 ACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCT 73006
||||||| | | |||||||| || || |||||||||||||| |||||| | |||||||
Sbjct 10887 ACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCT 10946
Query 73007 TCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGG 73066
||||||| | | || ||| | | | ||||| || | |||||||| | || ||||
Sbjct 10947 TCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGG 11006
Query 73067 CATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTG 73126
| ||||||||||||||||||||||||||||| || || |||||| |||||||| |
Sbjct 11007 CTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAA 11066
Query 73127 TACCAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAA 73186
| ||||||| ||| | | ||| | || ||||| || |||||||| ||||| ||
Sbjct 11067 TTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGC 11126
Query 73187 GAAATGCACACAACTTCCCACTAGACCTAGCATCTG 73222
| || || |||||||||||||| ||||| |||||||
Sbjct 11127 GTAACGCTCACAACTTCCCACTTGACCTTGCATCTG 11162
Score = 715 bits (792), Expect = 0.0
Identities = 757/996 (76%), Gaps = 1/996 (0%)
Strand=Plus/Minus
Query 72227 GGGACGAGTTTTGTGAGTGGGTAACATCCACTGACAATCGCATCTACGTTGGTTGGTTTG 72286
|||||| |||||| ||| | || || ||||| || || | ||| | |||||||| |
Sbjct 36975 GGGACGT-TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCG 36917
Query 72287 GTGTCTTAATGATCCCATGTCTTCTAACTGCTGCTGCTTGTTTCATTGTAGCATTCATCG 72346
| || ||||||||||| | | || || || || | ||||| |||||||| || |
Sbjct 36916 GAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTG 36857
Query 72347 CTGCTCCTCCAGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATG 72406
|||||||||| || |||||||| || ||| | || ||||| | || || | | || |
Sbjct 36856 CTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACG 36797
Query 72407 GTAACAACATCATCTCTGGTGCTGTAGTTCCATCTTCAAACGCAATAGGATTACACTTCT 72466
| |||||||||||||||||||||||| | || | || ||||| || ||| | |||||||
Sbjct 36796 GAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCT 36737
Query 72467 ATCCCATCTGGGAAGCAGCCACTATGGACGAGTGGTTGTATAACGGAGGTCCTTACCAGT 72526
| || |||||||||||||| || | || |||||| | || ||||| ||||||||||||
Sbjct 36736 ACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGC 36677
Query 72527 TAGTTATTTTCCACTTCCTTATTGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTAT 72586
| | | | |||||| | || ||||| | | | ||||||||| | ||||||| || |
Sbjct 36676 TTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTT 36617
Query 72587 CATACAGACTAGGAATGAGACCTTGGATATGTGTAGCATACTCAGCACCTGTATCTGCAG 72646
| | | | |||||||| | |||||||| |||||| ||||| || |||||| | ||||
Sbjct 36616 CTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAG 36557
Query 72647 CATTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCAC 72706
|| || |||||| | || || ||| ||||||||||||| ||||||||||| ||||| |
Sbjct 36556 CAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTC 36497
Query 72707 TAGGTATCTCAGGTACGTTCAACTTCATGTTCGTGTTCCAAGCAGAACACAACATACTAA 72766
| ||||| || || || |||||||||||| |||| ||||| || || |||||||| || |
Sbjct 36496 TTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTA 36437
Query 72767 TGCACCCCTTCCATATGGCAGGTGTAGCAGGTATGTTCGGTGGTAGTCTCTTCAGTGCAA 72826
||||||| ||||| ||| ||||| || ||| | ||||||||| || ||| |||||
Sbjct 36436 TGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAA 36377
Query 72827 TGCACGGTTCACTTGTTACTTCATCTCTAATCAGAGAGACAACAGAGAACGAGAGTCAAA 72886
||||||||||||| || ||||||||||| ||| | ||||| || ||||||||| | ||
Sbjct 36376 TGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAA 36317
Query 72887 ACTACGGCTATAAGTTCGGACAAGAAGAAGAAACATATAACATTGTTGCTGCTCATGGAT 72946
|| || || |||||||||||||||||||| || || ||||| || ||||| || || |
Sbjct 36316 ACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTT 36257
Query 72947 ACTTCGGTAGATTAATCTTCCAGTATGCATCATTCAACAACTCTCGTTCATTACACTTCT 73006
||||||| | | |||||||| || || |||||||||||||| |||||| | |||||||
Sbjct 36256 ACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCT 36197
Query 73007 TCCTCGCTGTATTCCCTGTAGTCTGTGTATGGTTAACCTCAATGGGTATCTGTACAATGG 73066
||||||| | | || ||| | | | ||||| || | |||||||| | || ||||
Sbjct 36196 TCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGG 36137
Query 73067 CATTCAACCTTAACGGATTCAACTTCAACCAATCAGTTGTAGATGCAAACGGAAAGATTG 73126
| ||||||||||||||||||||||||||||| || || |||||| |||||||| |
Sbjct 36136 CTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAA 36077
Query 73127 TACCAACATGGGGAGATGTTCTTAACAGAGCAAACCTTGGAATGGAAGTTATGCATGAAA 73186
| ||||||| ||| | | ||| | || ||||| || |||||||| ||||| ||
Sbjct 36076 TTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGC 36017
Query 73187 GAAATGCACACAACTTCCCACTAGACCTAGCATCTG 73222
| || || |||||||||||||| ||||| |||||||
Sbjct 36016 GTAACGCTCACAACTTCCCACTTGACCTTGCATCTG 35981
Score = 538 bits (596), Expect = 4e-148
Identities = 746/1046 (71%), Gaps = 29/1046 (3%)
Strand=Plus/Plus
Query 73360 ATGGTTTGACGTTCTTGATGATTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTC 73419
|||||||||| | || || ||| | ||| | ||||||||||||||| | || |||||
Sbjct 1991 ATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGGTC 2050
Query 73420 TGGTCTTTTACTTTTACCTTGTGCTTACCTAGCAATCGGAGGTTGGTTCGTAGGAACTAC 73479
|| ||||| | || || ||||| ||| | ||| | || || ||||| ||||| ||
Sbjct 2051 AGGAATTTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACAAC 2110
Query 73480 TTTCGTGACCTCATGGTACACACATGGTATTGCATCCTCATATCTTGAGGGAGCAAATTT 73539
||||| || |||||||||||||| ||| | ||| ||||| ||||||||| || ||
Sbjct 2111 ATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAACTT 2170
Query 73540 TTTAACTGCAGCAGTATCAACACCTGGTGATGCTATGGGTCATAGTCTATTGTTCCTTTG 73599
| || | |||||||||||||| | | ||||| ||| || | |||||||
Sbjct 2171 CCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTTTG 2230
Query 73600 GGGACCAGAGGCACAAGGAGATCTTGTACGATGGTTTCAATTAGGTGGACTATGGAACTT 73659
||||||||| |||||||| || | ||| |||| ||| | |||||| |||||| ||
Sbjct 2231 GGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACATT 2290
Query 73660 TGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTTAGACAGTTTGAGATTGC 73719
|||||| | || || | || ||| | || || || ||||| | || ||||| |||||
Sbjct 2291 CGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATTGC 2350
Query 73720 AGGACTTGTTGGGATACGTCCTTACAACGCATTAGCTTTTTCAGCAGTTATCGCAGTATT 73779
| | || || ||||| |||||||| | || || |||||| |||||| |||||
Sbjct 2351 ACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTATT 2410
Query 73780 CACGAGCATC----TTTCTAATATATCCTTTAGGACAGCATAGTTGGTTCTTCGCACCTT 73835
| ||| || || || || || | ||||| | |||||||| |||||||
Sbjct 2411 ----TGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTT 2466
Query 73836 CATTCGGTGTCGCAGCAATCTTTCGTTATATTTTATTCATACAGGGTTTCCACAATATAA 73895
|||| ||||| || | ||| || |||| ||| | ||| | || || |||||||| |
Sbjct 2467 CATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGA 2526
Query 73896 CTCTTAATCCATTTCATATGATGGGTGTAGCAGGTATACTTGGTGGAGCATTACTATGTG 73955
| ||||| ||||| || |||||||| ||||| ||| ||||||| | |||| | || ||||
Sbjct 2527 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTG 2586
Query 73956 CCATACATGGTGCAACAGTACAGAACACATTGTATGAAGACACATCACAATACACTGAAG 74015
| || || || ||||| ||| |||||||| | | ||||| || |
Sbjct 2587 CGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGA---------------TG--G 2629
Query 74016 GTAAGATTCAATCTACAACTTTCAGAGCATTCGATCCTACACAGGAAGAAGAGACTTATA 74075
| | ||||| | |||||| | ||||| | || || || | |||||||||||
Sbjct 2630 TGATGGTTCAAAC----ACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACT 2685
Query 74076 GTATGATTACTGCTAACAGATTCTGGTCACAGATATTTGGTATAGCATTTTCAAACAAAA 74135
||| | || || ||| | |||||||||||||| || ||| |||| || || |||||
Sbjct 2686 CAATGGTAACAGCAAACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGC 2745
Query 74136 GATTCTTACACTTCCTTATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCTATAG 74195
| | | |||||| ||||| | ||||||||||| | || | |||| ||| | | |
Sbjct 2746 GTTGGCTTCACTTCTTTATGCTTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTG 2805
Query 74196 GTATCGTAGGTCTAGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAG 74255
|| | ||||| ||||||||||||| | ||||||||||| ||||| |||||||| | |
Sbjct 2806 GTGTTGTAGGATTAGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTG 2865
Query 74256 CAGCAGAAGACCCAGAGTTTGAAACCTTCTACACTAAGAACATTCTTCTTAATGAAGGTA 74315
|||| ||||| || ||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct 2866 CAGCTGAAGATCCTGAGTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTA 2925
Query 74316 TGAGAGCATGGATGTCATCTGTCGATCAACCCCATGAGAACTTTGTGTTCCCAGAAGAAG 74375
| | ||||||||| || || ||||| || ||||| ||| |||| ||||| || || |
Sbjct 2926 TTCGTGCATGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGG 2985
Query 74376 TCTTGCCACGAGGCAACGCACTATAA 74401
| | ||||| || ||||| || |||
Sbjct 2986 TACTTCCACGTGGAAACGCTCTTTAA 3011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 572873463942520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |