Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq10 86.0 5e-12 >seq2 Length=1914325 Score = 107 bits (118), Expect = 2e-18 Identities = 151/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 34401 GTGGGAGCCGTTGACGATGAATCGTTC-GTTTTTGTAATCGACCTGCGTTTGCGCGCCCA 34459 ||| | ||||||||||||| | ||| | | | || | ||| || || ||||||| | Sbjct 845105 GTGCGCGCCGTTGACGATGTA-CGTGCCGCTCTTCTCGTCGCACTTGGTCAGCGCGCCGA 845163 Query 34460 GCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTT 34519 ||||| | || | |||||| || | ||| ||| ||| || | || |||||||||| | Sbjct 845164 GCTCGTAGCCCATGTACTTGGTGGTGTAGGTGGGCGGGCGGGCGAGAGCCTTGGCGACGT 845223 Query 34520 CGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGA 34579 || ||||||| |||| |||||||||||||| || || |||| ||||| || Sbjct 845224 CGACCATGTTGGGGATGTTCGTCTTGATGCCGTTACCGCGACCCTCGATCTTGGACTGGA 845283 Query 34580 T-GCGCGGCATTTTGTAGCGGTAGAAC 34605 | ||| ||||| ||||||||||||||| Sbjct 845284 TCGCG-GGCATCTTGTAGCGGTAGAAC 845309 >seq10 Length=1160640 Score = 86.0 bits (94), Expect = 5e-12 Identities = 105/138 (76%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 107176 GCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGA 107235 ||||||||||||| | ||||| || |||||||||| ||||||||| | |||| |||| Sbjct 191150 GCACGGCTTCCACATCCACGAGTTCGGCGACACCACCAACGGCTGCATGTCCACCGGACC 191209 Query 107236 ACACTTCAATCCCACATACCAA-AATCACGGTGCGCCCGACGCCGTAGAA-AGGCACGTC 107293 |||||||| ||| || ||| | ||||| || ||| || || |||| | |||| Sbjct 191210 CCACTTCAA-CCCGCACGGCAAGGACCACGGCGCCCCCACCGACG-AGAACCGCCACGCG 191267 Query 107294 GGCGATCTGGGCAACGTC 107311 ||||| || ||||||||| Sbjct 191268 GGCGACCTCGGCAACGTC 191285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841504401367