Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
seq10 86.0 5e-12
>seq2
Length=1914325
Score = 107 bits (118), Expect = 2e-18
Identities = 151/207 (73%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 34401 GTGGGAGCCGTTGACGATGAATCGTTC-GTTTTTGTAATCGACCTGCGTTTGCGCGCCCA 34459
||| | ||||||||||||| | ||| | | | || | ||| || || ||||||| |
Sbjct 845105 GTGCGCGCCGTTGACGATGTA-CGTGCCGCTCTTCTCGTCGCACTTGGTCAGCGCGCCGA 845163
Query 34460 GCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTT 34519
||||| | || | |||||| || | ||| ||| ||| || | || |||||||||| |
Sbjct 845164 GCTCGTAGCCCATGTACTTGGTGGTGTAGGTGGGCGGGCGGGCGAGAGCCTTGGCGACGT 845223
Query 34520 CGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGA 34579
|| ||||||| |||| |||||||||||||| || || |||| ||||| ||
Sbjct 845224 CGACCATGTTGGGGATGTTCGTCTTGATGCCGTTACCGCGACCCTCGATCTTGGACTGGA 845283
Query 34580 T-GCGCGGCATTTTGTAGCGGTAGAAC 34605
| ||| ||||| |||||||||||||||
Sbjct 845284 TCGCG-GGCATCTTGTAGCGGTAGAAC 845309
>seq10
Length=1160640
Score = 86.0 bits (94), Expect = 5e-12
Identities = 105/138 (76%), Gaps = 4/138 (3%)
Strand=Plus/Plus
Query 107176 GCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGTACGTCCGCCGGTGA 107235
||||||||||||| | ||||| || |||||||||| ||||||||| | |||| ||||
Sbjct 191150 GCACGGCTTCCACATCCACGAGTTCGGCGACACCACCAACGGCTGCATGTCCACCGGACC 191209
Query 107236 ACACTTCAATCCCACATACCAA-AATCACGGTGCGCCCGACGCCGTAGAA-AGGCACGTC 107293
|||||||| ||| || ||| | ||||| || ||| || || |||| | ||||
Sbjct 191210 CCACTTCAA-CCCGCACGGCAAGGACCACGGCGCCCCCACCGACG-AGAACCGCCACGCG 191267
Query 107294 GGCGATCTGGGCAACGTC 107311
||||| || |||||||||
Sbjct 191268 GGCGACCTCGGCAACGTC 191285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412841504401367
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |