Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq8 125 5e-24
seq4 100 2e-16
seq15 91.5 1e-13
>seq8
Length=1276107
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | |||| ||||||||| ||||| ||||||| || |||| ||||
Sbjct 455430 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 455489
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 455490 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 455549
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| || | ||| ||||||
Sbjct 455550 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTC 455609
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| ||||| || |||||||||||
Sbjct 455610 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 455641
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | |||| ||||||||| ||||| ||||||| || |||| ||||
Sbjct 455658 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 455717
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 455718 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 455777
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| || | ||| ||||||
Sbjct 455778 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTC 455837
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| ||||| || |||||||||||
Sbjct 455838 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 455869
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | |||| ||||||||| ||||| ||||||| || |||| ||||
Sbjct 455886 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCC 455945
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 455946 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 456005
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| || | ||| ||||||
Sbjct 456006 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTC 456065
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| ||||| || |||||||||||
Sbjct 456066 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 456097
Score = 122 bits (134), Expect = 6e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | |||| ||||||||| ||||| ||||||| || |||| | ||
Sbjct 456114 AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCGTCC 456173
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 456174 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 456233
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | |||||| || | ||| ||||||
Sbjct 456234 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTC 456293
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || ||||| ||||| || |||||||||||
Sbjct 456294 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 456325
>seq4
Length=1584431
Score = 100 bits (110), Expect = 2e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | |||| ||||||||| ||||| ||||||| ||| |||| ||||
Sbjct 22757 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTGCGGCCATCC 22698
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 22697 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCC 22638
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | ||| || || | ||| ||||||
Sbjct 22637 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGTC 22578
Query 34946 TTTCCCGTGA 34955
|| || ||||
Sbjct 22577 TTACCGGTGA 22568
>seq15
Length=739136
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || ||||| | |||| ||||||||| ||||| ||||||| || |||| | ||
Sbjct 297687 AGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCGTCC 297746
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| || ||||||||||| || |||||||| | || | |||||||||||
Sbjct 297747 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 297806
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | || | ||| || || | ||| ||||||
Sbjct 297807 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCCACCTCGAGGGTGATGGTC 297866
Query 34946 TTTCCCGTGA 34955
|| || ||||
Sbjct 297867 TTGCCGGTGA 297876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692724581761
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |