Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq10 96.9 3e-15
seq8 82.4 6e-11
>seq10
Length=1160640
Score = 96.9 bits (106), Expect = 3e-15
Identities = 117/153 (76%), Gaps = 5/153 (3%)
Strand=Plus/Plus
Query 105071 CTTGCCGCGCGGACTGCACGGCTTTCACGTTCACGAGTTCGGCGATACCAGCAACGGCTG 105130
|| |||||| | | ||||||||| ||| | |||||||||||||| |||| |||||||||
Sbjct 191136 CTCGCCGCGGGCAA-GCACGGCTTCCACATCCACGAGTTCGGCGACACCACCAACGGCTG 191194
Query 105131 CACGTCCGCCGGCGAGCACTTCAACCC-TACGCGCCAAAATCACGGCGCTCCAGACGCCG 105189
|| |||| |||| ||||||||||| ||| || | | |||||||| || || ||
Sbjct 191195 CATGTCCACCGGACCCCACTTCAACCCGCACG-GCAAGGACCACGGCGCCCCCACCGACG 191253
Query 105190 CAGAA-AGGCACGTCGGCGACCTGGGCAATGTC 105221
|||| | |||| |||||||| ||||| |||
Sbjct 191254 -AGAACCGCCACGCGGGCGACCTCGGCAACGTC 191285
>seq8
Length=1276107
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| ||| | || ||||| ||||| ||| |||| ||| || |
Sbjct 456325 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCTTCC 456266
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || ||||| || || || ||| | ||| || |||
Sbjct 456265 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 456206
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | || || || ||||| ||||||| | || | ||||||||||||
Sbjct 456205 CAGCGCCTGATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACTCTCGCGGACTACAAC 456146
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||||| || | ||| | |||
Sbjct 456145 ATCCAGAAGGAGTCCACCCTCCACCTTGTG 456116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398876707635091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |