Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_023584.1
Length=170438
Score E
Sequences producing significant alignments: (Bits) Value
seq19 809 0.0
>seq19
Length=72585
Score = 809 bits (896), Expect = 0.0
Identities = 772/985 (78%), Gaps = 2/985 (0%)
Strand=Plus/Plus
Query 157060 TGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTTATGATTCCA 157119
||| | ||||| || | |||||| | || | ||||||||||| || | ||||| ||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 157120 ACATTGCTTGCAGCAACTATCTG-CTTCATTGTTGCATTCGTAGCAGCACCTCCCGTTGA 157178
|| || ||| |||||||| || | ||||| || ||||| | || || ||||| || ||
Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 157179 TATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTC 157238
|||||| ||||| || || ||||| |||| || || ||||| || ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 157239 TGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAGC 157298
|||||| || | ||| | || ||||| ||||| |||||||||||||| |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 157299 AGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTT 157358
||| || ||||||||||||||||||||||||||||||| ||| || | || | ||||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 157359 CCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTAT 157418
| | ||||| || | | | || ||||| ||||||||||| ||||||| ||||||||| ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 157419 GCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 157478
||| || ||||| ||| || ||||| || || || || || || | || |||||| |
Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602
Query 157479 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 157538
||| || || ||||||| ||||||||||| |||| |||||||||||||| ||||| ||
Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662
Query 157539 TTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCACAT 157598
||| |||| ||| |||| |||||||| |||||||| || |||||||| || ||||||||
Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722
Query 157599 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGT 157658
||| || |||||||| ||||||||||| || | |||||||| |||||||| |||||
Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782
Query 157659 TACTTCCTCGCTTGTTCGTGAAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTT 157718
||||| || || | ||||| || ||||| | ||||| ||| || ||||||||
Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842
Query 157719 CGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGAT 157778
||| |||||||||||||| ||||||||||| |||||||||||||||||||| || || ||
Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902
Query 157779 CTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCC 157838
||||||||||||||||||||||||| | || |||||||||||||| |||||
Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962
Query 157839 TGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGG 157898
|| | || ||||||||||| || |||| | || ||||| |||||||| |||||
Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022
Query 157899 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 157958
||||||||||||||||| | | ||| | || ||||| | ||||| ||||| ||
Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 11082
Query 157959 TGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158018
| || | ||||| ||| || ||||||||||| ||||| ||||||||||| ||||||||
Sbjct 11083 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 11142
Query 158019 CCCACTGGATCTTGCTGCTGCAGAA 158043
|||||| || ||||| ||| ||||
Sbjct 11143 CCCACTTGACCTTGCATCTGTAGAA 11167
Score = 809 bits (896), Expect = 0.0
Identities = 772/985 (78%), Gaps = 2/985 (0%)
Strand=Plus/Minus
Query 157060 TGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTTATGATTCCA 157119
||| | ||||| || | |||||| | || | ||||||||||| || | ||||| ||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 157120 ACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACCTCCCGTTGA 157178
|| || ||| |||||||| || | ||||| || ||||| | || || ||||| || ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 157179 TATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTC 157238
|||||| ||||| || || ||||| |||| || || ||||| || ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 157239 TGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAGC 157298
|||||| || | ||| | || ||||| ||||| |||||||||||||| |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 157299 AGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTT 157358
||| || ||||||||||||||||||||||||||||||| ||| || | || | ||||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 157359 CCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTAT 157418
| | ||||| || | | | || ||||| ||||||||||| ||||||| ||||||||| ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 157419 GCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 157478
||| || ||||| ||| || ||||| || || || || || || | || |||||| |
Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541
Query 157479 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 157538
||| || || ||||||| ||||||||||| |||| |||||||||||||| ||||| ||
Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481
Query 157539 TTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCACAT 157598
||| |||| ||| |||| |||||||| |||||||| || |||||||| || ||||||||
Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421
Query 157599 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGT 157658
||| || |||||||| ||||||||||| || | |||||||| |||||||| |||||
Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361
Query 157659 TACTTCCTCGCTTGTTCGTGAAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTT 157718
||||| || || | ||||| || ||||| | ||||| ||| || ||||||||
Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301
Query 157719 CGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGAT 157778
||| |||||||||||||| ||||||||||| |||||||||||||||||||| || || ||
Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241
Query 157779 CTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCC 157838
||||||||||||||||||||||||| | || |||||||||||||| |||||
Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181
Query 157839 TGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGG 157898
|| | || ||||||||||| || |||| | || ||||| |||||||| |||||
Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121
Query 157899 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 157958
||||||||||||||||| | | ||| | || ||||| | ||||| ||||| ||
Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 36061
Query 157959 TGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158018
| || | ||||| ||| || ||||||||||| ||||| ||||||||||| ||||||||
Sbjct 36060 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 36001
Query 158019 CCCACTGGATCTTGCTGCTGCAGAA 158043
|||||| || ||||| ||| ||||
Sbjct 36000 CCCACTTGACCTTGCATCTGTAGAA 35976
Score = 618 bits (684), Expect = 5e-172
Identities = 764/1037 (74%), Gaps = 6/1037 (1%)
Strand=Plus/Plus
Query 158763 AAGAGAGGATGGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTT 158822
||| | ||||||||||||| | |||||||||||||| || ||||||||||| || ||
Sbjct 1983 AAGCGCGGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTA 2042
Query 158823 GGCTGGTCTGGACTTCTTCTTCTACCCA-CTGCTTATCTTGCTATTGGCGGTTGGCTTAC 158881
|| ||||| ||| || || || | |||| ||| || |||| |||| || ||| ||||
Sbjct 2043 GGTTGGTCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTAC 2101
Query 158882 TGGCACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGG 158941
||| || || |||| || ||||| ||||| || | || | ||| || ||||||||
Sbjct 2102 TGGAACAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGG 2161
Query 158942 TGCAAACTTTCTTACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCT 159001
||||| |||||| | ||||| || || ||| || | ||||| ||| || |||||
Sbjct 2162 ATGTAACTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCT 2221
Query 159002 GCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGT-CCAACTTGGGGGAC 159060
|| || ||||| || || || ||||| || ||| || || ||| || ||||| |||
Sbjct 2222 TCTCCTTTGGGGACCAGAAGCACAAGGTGAGTTC-ACACGTTGGTGTCAGCTTGGTGGAT 2280
Query 159061 TCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGT 159120
| |||| || || || || |||||||| || | |||| || || ||||| || || |
Sbjct 2281 TATGGACATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAAT 2340
Query 159121 TTGAACTGGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTA 159180
||||| | |||||| | || ||||| ||||| || ||||| ||||| | ||||
Sbjct 2341 TTGAAATTGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTA 2400
Query 159181 TTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCG 159240
| ||||| ||||| || |||||||| ||||||||||| || || | ||||| || |
Sbjct 2401 TCGCTGTATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTG 2460
Query 159241 CTCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACA 159300
| || || ||||| || || | ||| ||| | ||| | || ||| | |||||||||||||
Sbjct 2461 CACCTTCATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACA 2520
Query 159301 ATTGGACACTAAACCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTC 159360
| |||||||| ||||| ||||| ||||||||||| |||||| | || || | ||||||||
Sbjct 2521 ACTGGACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTC 2580
Query 159361 TATCTGCTATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAA 159420
| | ||| ||||| || | || || || || ||| | | ||| ||||| || |||
Sbjct 2581 TTTGTGCGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAA 2640
Query 159421 ACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAA 159480
|||| || || ||| | ||||||||| || |||||||| || ||||| || ||||
Sbjct 2641 ACACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAA 2700
Query 159481 ACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCT 159540
|||| |||||||| ||||| ||||| | || || ||||||||||| |||||||| ||||
Sbjct 2701 ACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCT 2760
Query 159541 TTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTA-TTGGCATTATTGGTCTT 159599
||||| | || || ||||| | || |||||| | ||| | |||| || | || |
Sbjct 2761 TTATGCTTTTCGTACCTGTAACAGGGTTATGGATGT-CAGCACTTGGTGTTGTAGGATTA 2819
Query 159600 GCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCA 159659
|| || || || ||||| ||||| ||||| ||||||||| | ||||| ||||||||
Sbjct 2820 GCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCT 2879
Query 159660 GAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTG 159719
|| |||||||| |||||||| ||||| |||||||| || ||||| | ||||| ||| ||
Sbjct 2880 GAGTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATG 2939
Query 159720 GCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGT 159779
||| || ||||| || ||||||||| | | ||||| || || || || ||| | ||
Sbjct 2940 GCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGA 2999
Query 159780 AACGCATTGTGATTCAA 159796
||||| | | ||||||
Sbjct 3000 AACGCTCTTTAATTCAA 3016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545273470497520
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