Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq19 809 0.0 >seq19 Length=72585 Score = 809 bits (896), Expect = 0.0 Identities = 772/985 (78%), Gaps = 2/985 (0%) Strand=Plus/Plus Query 157060 TGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTTATGATTCCA 157119 ||| | ||||| || | |||||| | || | ||||||||||| || | ||||| || Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 157120 ACATTGCTTGCAGCAACTATCTG-CTTCATTGTTGCATTCGTAGCAGCACCTCCCGTTGA 157178 || || ||| |||||||| || | ||||| || ||||| | || || ||||| || || Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 157179 TATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTC 157238 |||||| ||||| || || ||||| |||| || || ||||| || |||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 157239 TGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAGC 157298 |||||| || | ||| | || ||||| ||||| |||||||||||||| ||||||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 157299 AGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTT 157358 ||| || ||||||||||||||||||||||||||||||| ||| || | || | |||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 157359 CCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTAT 157418 | | ||||| || | | | || ||||| ||||||||||| ||||||| ||||||||| || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 157419 GCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 157478 ||| || ||||| ||| || ||||| || || || || || || | || |||||| | Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602 Query 157479 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 157538 ||| || || ||||||| ||||||||||| |||| |||||||||||||| ||||| || Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662 Query 157539 TTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCACAT 157598 ||| |||| ||| |||| |||||||| |||||||| || |||||||| || |||||||| Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722 Query 157599 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGT 157658 ||| || |||||||| ||||||||||| || | |||||||| |||||||| ||||| Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782 Query 157659 TACTTCCTCGCTTGTTCGTGAAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTT 157718 ||||| || || | ||||| || ||||| | ||||| ||| || |||||||| Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842 Query 157719 CGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGAT 157778 ||| |||||||||||||| ||||||||||| |||||||||||||||||||| || || || Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902 Query 157779 CTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCC 157838 ||||||||||||||||||||||||| | || |||||||||||||| ||||| Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962 Query 157839 TGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGG 157898 || | || ||||||||||| || |||| | || ||||| |||||||| ||||| Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022 Query 157899 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 157958 ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| || Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 11082 Query 157959 TGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158018 | || | ||||| ||| || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 11083 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 11142 Query 158019 CCCACTGGATCTTGCTGCTGCAGAA 158043 |||||| || ||||| ||| |||| Sbjct 11143 CCCACTTGACCTTGCATCTGTAGAA 11167 Score = 809 bits (896), Expect = 0.0 Identities = 772/985 (78%), Gaps = 2/985 (0%) Strand=Plus/Minus Query 157060 TGGGTAACTTCCACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTGCTTATGATTCCA 157119 ||| | ||||| || | |||||| | || | ||||||||||| || | ||||| || Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 157120 ACATTGCTTGCAGCAACTATCTGC-TTCATTGTTGCATTCGTAGCAGCACCTCCCGTTGA 157178 || || ||| |||||||| || | ||||| || ||||| | || || ||||| || || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 157179 TATCGACGGTATTCGCGAACCAGTTGCTGGTTCTCTCATGTATGGCAACAACATCATCTC 157238 |||||| ||||| || || ||||| |||| || || ||||| || |||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 157239 TGGTGCAGTTGTTCCTTCTTCAAACGCAATCGGTCTTCACTTCTACCCCATCTGGGAAGC 157298 |||||| || | ||| | || ||||| ||||| |||||||||||||| ||||||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 157299 AGCATCACTTGATGAGTGGCTTTACAACGGTGGTCCTTTCCAACTGGTAGTCTTTCACTT 157358 ||| || ||||||||||||||||||||||||||||||| ||| || | || | |||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 157359 CCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTTTAGGTAT 157418 | | ||||| || | | | || ||||| ||||||||||| ||||||| ||||||||| || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 157419 GCGCCCCTGGATCTGTGTTGCCTACTCGGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 157478 ||| || ||||| ||| || ||||| || || || || || || | || |||||| | Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541 Query 157479 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 157538 ||| || || ||||||| ||||||||||| |||| |||||||||||||| ||||| || Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481 Query 157539 TTTTAACTATATGCTCGTCTTCCAGGCAGAGCACAATATTCTTATGCATCCGTTCCACAT 157598 ||| |||| ||| |||| |||||||| |||||||| || |||||||| || |||||||| Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421 Query 157599 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGT 157658 ||| || |||||||| ||||||||||| || | |||||||| |||||||| ||||| Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361 Query 157659 TACTTCCTCGCTTGTTCGTGAAACAACTGAAACAGAGTCACAGAACTATGGTTACAAGTT 157718 ||||| || || | ||||| || ||||| | ||||| ||| || |||||||| Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301 Query 157719 CGGTCAAGAAGAAGAGACGTACAACATCGTTGCTGCACACGGTTACTTCGGTCGCCTGAT 157778 ||| |||||||||||||| ||||||||||| |||||||||||||||||||| || || || Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241 Query 157779 CTTCCAATACGCTTCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTCGCCGCATGGCC 157838 ||||||||||||||||||||||||| | || |||||||||||||| ||||| Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181 Query 157839 TGTTGTCGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGG 157898 || | || ||||||||||| || |||| | || ||||| |||||||| ||||| Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121 Query 157899 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 157958 ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| || Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 36061 Query 157959 TGTCCTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158018 | || | ||||| ||| || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 36060 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 36001 Query 158019 CCCACTGGATCTTGCTGCTGCAGAA 158043 |||||| || ||||| ||| |||| Sbjct 36000 CCCACTTGACCTTGCATCTGTAGAA 35976 Score = 618 bits (684), Expect = 5e-172 Identities = 764/1037 (74%), Gaps = 6/1037 (1%) Strand=Plus/Plus Query 158763 AAGAGAGGATGGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTT 158822 ||| | ||||||||||||| | |||||||||||||| || ||||||||||| || || Sbjct 1983 AAGCGCGGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTA 2042 Query 158823 GGCTGGTCTGGACTTCTTCTTCTACCCA-CTGCTTATCTTGCTATTGGCGGTTGGCTTAC 158881 || ||||| ||| || || || | |||| ||| || |||| |||| || ||| |||| Sbjct 2043 GGTTGGTCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTAC 2101 Query 158882 TGGCACGACTTTCGCTACGAGCTGGTATACACATGGACTCGCTACTTCCTATCTTGAGGG 158941 ||| || || |||| || ||||| ||||| || | || | ||| || |||||||| Sbjct 2102 TGGAACAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGG 2161 Query 158942 TGCAAACTTTCTTACAGCAGCAGTTTCGACTCCAGCTGATGCTATGGGTCATTCTCTTCT 159001 ||||| |||||| | ||||| || || ||| || | ||||| ||| || ||||| Sbjct 2162 ATGTAACTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCT 2221 Query 159002 GCTTCTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGGT-CCAACTTGGGGGAC 159060 || || ||||| || || || ||||| || ||| || || ||| || ||||| ||| Sbjct 2222 TCTCCTTTGGGGACCAGAAGCACAAGGTGAGTTC-ACACGTTGGTGTCAGCTTGGTGGAT 2280 Query 159061 TCTGGAATTTTGTGGCGCTCCACGGTGCCTTTGCCCTAATTGGTTTCATGCTTCGCCAGT 159120 | |||| || || || || |||||||| || | |||| || || ||||| || || | Sbjct 2281 TATGGACATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAAT 2340 Query 159121 TTGAACTGGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTA 159180 ||||| | |||||| | || ||||| ||||| || ||||| ||||| | |||| Sbjct 2341 TTGAAATTGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTA 2400 Query 159181 TTGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTTGGTCAGTCCAGTTGGTTTTTCG 159240 | ||||| ||||| || |||||||| ||||||||||| || || | ||||| || | Sbjct 2401 TCGCTGTATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTG 2460 Query 159241 CTCCGTCCTTTGGGGTGGCCGCAATATTCAGGTTCCTACTCTTCCTACAAGGGTTCCACA 159300 | || || ||||| || || | ||| ||| | ||| | || ||| | ||||||||||||| Sbjct 2461 CACCTTCATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACA 2520 Query 159301 ATTGGACACTAAACCCCTTCCATATGATGGGAGTTGCTGGTATCCTAGGTGGAGCACTTC 159360 | |||||||| ||||| ||||| ||||||||||| |||||| | || || | |||||||| Sbjct 2521 ACTGGACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTC 2580 Query 159361 TATCTGCTATTCATGGGGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAA 159420 | | ||| ||||| || | || || || || ||| | | ||| ||||| || ||| Sbjct 2581 TTTGTGCGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAA 2640 Query 159421 ACACCTTTAAGGCGTTTGATTCAACTCAAGAGGAGGAGACTTATTCTATGGTCACTGCAA 159480 |||| || || ||| | ||||||||| || |||||||| || ||||| || |||| Sbjct 2641 ACACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAA 2700 Query 159481 ACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTCT 159540 |||| |||||||| ||||| ||||| | || || ||||||||||| |||||||| |||| Sbjct 2701 ACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCT 2760 Query 159541 TTATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCAGTA-TTGGCATTATTGGTCTT 159599 ||||| | || || ||||| | || |||||| | ||| | |||| || | || | Sbjct 2761 TTATGCTTTTCGTACCTGTAACAGGGTTATGGATGT-CAGCACTTGGTGTTGTAGGATTA 2819 Query 159600 GCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCA 159659 || || || || ||||| ||||| ||||| ||||||||| | ||||| |||||||| Sbjct 2820 GCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCT 2879 Query 159660 GAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTG 159719 || |||||||| |||||||| ||||| |||||||| || ||||| | ||||| ||| || Sbjct 2880 GAGTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATG 2939 Query 159720 GCACCTGCTGATCAACCCCATGAAAACTTCATCTTCCCAGAAGAAGTTCTACCAAGAGGT 159779 ||| || ||||| || ||||||||| | | ||||| || || || || ||| | || Sbjct 2940 GCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGA 2999 Query 159780 AACGCATTGTGATTCAA 159796 ||||| | | |||||| Sbjct 3000 AACGCTCTTTAATTCAA 3016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545273470497520