Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq19 800 0.0 >seq19 Length=72585 Score = 800 bits (886), Expect = 0.0 Identities = 766/977 (78%), Gaps = 3/977 (0%) Strand=Plus/Plus Query 177567 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 177626 ||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| || Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 177627 ACTCTGTTGGCAGCAACTATCTG-CTTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGA 177685 ||| | | |||||||| || | |||||||| || || | |||||||| || || || Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 177686 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 177745 ||||| || |||||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 177746 TGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 177805 |||||| || | || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 177806 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 177865 || || |||||||||||||| || ||||||||||||| ||| || | || | |||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 177866 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTAT 177925 | | ||||| || | | |||| ||||| ||||||||||| ||||| | |||| |||| || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 177926 GCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCT 177985 ||| || ||||| ||| || |||||||| ||||| ||||||||| | || || || | Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602 Query 177986 AGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 178045 || || || ||||||| ||||| ||||| |||| |||||||||||||| ||||| || Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662 Query 178046 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACAT 178105 ||| |||| |||| | |||||||| || || ||||| |||||||||||||| |||||||| Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722 Query 178106 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGT 178165 ||| ||||||||||| ||||||||||| || ||||||||||| ||||| || ||||| Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782 Query 178166 TACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTT 178225 ||||| || ||| |||||||||| || || | ||||| ||| || |||||||| Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842 Query 178226 CGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 178285 ||||||||||||||| || || |||||||| || || || ||||||||||| ||| | || Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902 Query 178286 CTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCC 178345 ||||||||| || || ||||||||||| |||||||| ||||||||||||||| ||||| Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962 Query 178346 TGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGG 178405 ||| | |||||||||||||| || | ||| | || || ||||| || ||||| || || Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022 Query 178406 ATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGA 178465 |||||||||||||||||| | | || | | |||||||| | ||||||||||| || Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 11082 Query 178466 CGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACT 178525 | | |||||||| ||||| |||||||| |||||||| | || || || |||| Sbjct 11083 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAA-CGCTCACAACT 11141 Query 178526 TCCCGCTTGATCTTGCA 178542 |||| ||||| |||||| Sbjct 11142 TCCCACTTGACCTTGCA 11158 Score = 800 bits (886), Expect = 0.0 Identities = 766/977 (78%), Gaps = 3/977 (0%) Strand=Plus/Minus Query 177567 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 177626 ||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| || Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 177627 ACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGA 177685 ||| | | |||||||| || | |||||||| || || | |||||||| || || || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 177686 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 177745 ||||| || |||||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 177746 TGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 177805 |||||| || | || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 177806 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 177865 || || |||||||||||||| || ||||||||||||| ||| || | || | |||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 177866 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTAT 177925 | | ||||| || | | |||| ||||| ||||||||||| ||||| | |||| |||| || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 177926 GCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCT 177985 ||| || ||||| ||| || |||||||| ||||| ||||||||| | || || || | Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541 Query 177986 AGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 178045 || || || ||||||| ||||| ||||| |||| |||||||||||||| ||||| || Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481 Query 178046 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACAT 178105 ||| |||| |||| | |||||||| || || ||||| |||||||||||||| |||||||| Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421 Query 178106 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGT 178165 ||| ||||||||||| ||||||||||| || ||||||||||| ||||| || ||||| Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361 Query 178166 TACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTT 178225 ||||| || ||| |||||||||| || || | ||||| ||| || |||||||| Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301 Query 178226 CGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 178285 ||||||||||||||| || || |||||||| || || || ||||||||||| ||| | || Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241 Query 178286 CTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCC 178345 ||||||||| || || ||||||||||| |||||||| ||||||||||||||| ||||| Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181 Query 178346 TGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGG 178405 ||| | |||||||||||||| || | ||| | || || ||||| || ||||| || || Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121 Query 178406 ATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGA 178465 |||||||||||||||||| | | || | | |||||||| | ||||||||||| || Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 36061 Query 178466 CGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACT 178525 | | |||||||| ||||| |||||||| |||||||| | || || || |||| Sbjct 36060 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAA-CGCTCACAACT 36002 Query 178526 TCCCGCTTGATCTTGCA 178542 |||| ||||| |||||| Sbjct 36001 TCCCACTTGACCTTGCA 35985 Score = 600 bits (664), Expect = 1e-166 Identities = 752/1029 (73%), Gaps = 2/1029 (0%) Strand=Plus/Plus Query 178933 GGCTGGTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGG 178992 || ||||| || | | || ||||||||||| || ||||| || || || || |||||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 178993 TCTGGACTCCTACTTCTTCCCA-CTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGAC 179051 || ||| | || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 179052 AGCTTTTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAA 179111 | | || || || |||||||| || ||| | || ||||| || ||||| || ||| Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 179112 CTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 179171 ||| ||||| | || || || || || || | ||||| ||| || |||||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 179172 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAA 179231 |||||| || || | || || | ||| || ||||| || ||||| ||| |||||| Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 179232 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACT 179291 ||||| || || |||||||| |||| |||| ||||| ||||| ||||| |||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 179292 GGCACGTCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGT 179351 |||||| | || ||||| ||||| |||||||| || | | ||||| || || Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 179352 ATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATC 179411 ||| || |||||| || || ||||||||||||||||| | ||||||||||| || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 179412 GTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGAC 179471 |||||||| |||| || || | ||| | |||||||| ||||| |||||||||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 179472 ACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGC 179531 ||| ||||| || |||||||||||||| || ||| | || || | || || || | ||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 179532 TATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATT 179591 ||||| |||| |||||||||||| ||| | | |||||||| || ||||||| || Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 179592 TAAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTT 179651 || || || | || |||| || ||||| || || ||||| ||||| |||||||| Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 179652 TTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCT 179711 ||||| ||||| ||||| || | || || ||||||||| | |||||||||| ||| Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 179712 GTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAA 179771 || || ||||| | || | ||| | || | |||| | | || |||| ||||| Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 179772 TCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGA 179831 || ||||| || || || || ||||||||| | ||||| |||||||||||||| || Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 179832 GACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGC 179891 || ||||| || ||||| |||||||| || ||||| | ||||| ||| ||||| || Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947 Query 179892 TGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951 ||||| || ||||||||| | | ||||| || || || || || |||| ||||| || Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Query 179952 GTGATTCAA 179960 | |||||| Sbjct 3008 TTAATTCAA 3016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605667056154040