Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq19 800 0.0
>seq19
Length=72585
Score = 800 bits (886), Expect = 0.0
Identities = 766/977 (78%), Gaps = 3/977 (0%)
Strand=Plus/Plus
Query 177567 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 177626
||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 177627 ACTCTGTTGGCAGCAACTATCTG-CTTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGA 177685
||| | | |||||||| || | |||||||| || || | |||||||| || || ||
Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 177686 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 177745
||||| || |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 177746 TGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 177805
|||||| || | || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 177806 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 177865
|| || |||||||||||||| || ||||||||||||| ||| || | || | ||||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 177866 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTAT 177925
| | ||||| || | | |||| ||||| ||||||||||| ||||| | |||| |||| ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 177926 GCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCT 177985
||| || ||||| ||| || |||||||| ||||| ||||||||| | || || || |
Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602
Query 177986 AGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 178045
|| || || ||||||| ||||| ||||| |||| |||||||||||||| ||||| ||
Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662
Query 178046 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACAT 178105
||| |||| |||| | |||||||| || || ||||| |||||||||||||| ||||||||
Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722
Query 178106 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGT 178165
||| ||||||||||| ||||||||||| || ||||||||||| ||||| || |||||
Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782
Query 178166 TACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTT 178225
||||| || ||| |||||||||| || || | ||||| ||| || ||||||||
Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842
Query 178226 CGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 178285
||||||||||||||| || || |||||||| || || || ||||||||||| ||| | ||
Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902
Query 178286 CTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCC 178345
||||||||| || || ||||||||||| |||||||| ||||||||||||||| |||||
Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962
Query 178346 TGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGG 178405
||| | |||||||||||||| || | ||| | || || ||||| || ||||| || ||
Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022
Query 178406 ATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGA 178465
|||||||||||||||||| | | || | | |||||||| | ||||||||||| ||
Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 11082
Query 178466 CGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACT 178525
| | |||||||| ||||| |||||||| |||||||| | || || || ||||
Sbjct 11083 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAA-CGCTCACAACT 11141
Query 178526 TCCCGCTTGATCTTGCA 178542
|||| ||||| ||||||
Sbjct 11142 TCCCACTTGACCTTGCA 11158
Score = 800 bits (886), Expect = 0.0
Identities = 766/977 (78%), Gaps = 3/977 (0%)
Strand=Plus/Minus
Query 177567 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 177626
||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 177627 ACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCGTCGCTGCTCCCCCCGTGGA 177685
||| | | |||||||| || | |||||||| || || | |||||||| || || ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 177686 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 177745
||||| || |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 177746 TGGTGCAGTTGTACCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 177805
|||||| || | || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 177806 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 177865
|| || |||||||||||||| || ||||||||||||| ||| || | || | ||||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 177866 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTCTAGGTAT 177925
| | ||||| || | | |||| ||||| ||||||||||| ||||| | |||| |||| ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 177926 GCGCCCCTGGATCTGTGTTGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTCT 177985
||| || ||||| ||| || |||||||| ||||| ||||||||| | || || || |
Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541
Query 177986 AGTCTATCCTTTCGGTCAAGGTTCATTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 178045
|| || || ||||||| ||||| ||||| |||| |||||||||||||| ||||| ||
Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481
Query 178046 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCACCCGTTCCACAT 178105
||| |||| |||| | |||||||| || || ||||| |||||||||||||| ||||||||
Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421
Query 178106 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGT 178165
||| ||||||||||| ||||||||||| || ||||||||||| ||||| || |||||
Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361
Query 178166 TACTTCTTCGCTCGTCCGTGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTT 178225
||||| || ||| |||||||||| || || | ||||| ||| || ||||||||
Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301
Query 178226 CGGACAAGAAGAAGAAACATATAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 178285
||||||||||||||| || || |||||||| || || || ||||||||||| ||| | ||
Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241
Query 178286 CTTCCAATATGCATCGTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCAGCATGGCC 178345
||||||||| || || ||||||||||| |||||||| ||||||||||||||| |||||
Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181
Query 178346 TGTAGTTGGAATCTGGTTCACCGCACTTGGTGTATCCACCATGGCATTTAACCTCAATGG 178405
||| | |||||||||||||| || | ||| | || || ||||| || ||||| || ||
Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121
Query 178406 ATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACACATGGGCAGA 178465
|||||||||||||||||| | | || | | |||||||| | ||||||||||| ||
Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 36061
Query 178466 CGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAAAGAAATAGCACATAACT 178525
| | |||||||| ||||| |||||||| |||||||| | || || || ||||
Sbjct 36060 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAA-CGCTCACAACT 36002
Query 178526 TCCCGCTTGATCTTGCA 178542
|||| ||||| ||||||
Sbjct 36001 TCCCACTTGACCTTGCA 35985
Score = 600 bits (664), Expect = 1e-166
Identities = 752/1029 (73%), Gaps = 2/1029 (0%)
Strand=Plus/Plus
Query 178933 GGCTGGTTCGATGTCTTGGATGACTGGCTTAATCGGGATCGCTTTGTCTTTGTGGGTTGG 178992
|| ||||| || | | || ||||||||||| || ||||| || || || || ||||||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 178993 TCTGGACTCCTACTTCTTCCCA-CTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGAC 179051
|| ||| | || || |||||| ||| || |||| |||| || ||| ||||||| ||
Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 179052 AGCTTTTGTTACGAGTTGGTACACCCATGGTCTTGCTAGTTCCTATCTTGAAGGTGCTAA 179111
| | || || || |||||||| || ||| | || ||||| || ||||| || |||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 179112 CTTTCTTACGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 179171
||| ||||| | || || || || || || | ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 179172 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAA 179231
|||||| || || | || || | ||| || ||||| || ||||| ||| ||||||
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 179232 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTCATGCTTCGTCAGTTTGAACT 179291
||||| || || |||||||| |||| |||| ||||| ||||| ||||| |||||| |
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 179292 GGCACGTCTCATCGGTATCCGTCCTTACAATGCGATTGCTTTTACTGGTCCTATTGCCGT 179351
|||||| | || ||||| ||||| |||||||| || | | ||||| || ||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 179352 ATTCGTTAGTGTATTTCTCATCTACCCACTTGGACAATCCAGTTGGTTCTTTGCGCCATC 179411
||| || |||||| || || ||||||||||||||||| | ||||||||||| || ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 179412 GTTTGGTGTTGCGGCGATCTTTAGATTCCTACTTTTCTTACAAGGTTTCCACAACTGGAC 179471
|||||||| |||| || || | ||| | |||||||| ||||| ||||||||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 179472 ACTCAACCCCTTTCACATGATGGGAGTTGCAGGTATCCTGGGTGGTGCTCTGCTCTCTGC 179531
||| ||||| || |||||||||||||| || ||| | || || | || || || | |||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 179532 TATTCATGGAGTAACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATT 179591
||||| |||| |||||||||||| ||| | | |||||||| || ||||||| ||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647
Query 179592 TAAAGCGTTCGACTCTACGCAAGAGGAGGAGACCTATTCTATGGTTACAGCGAACCGTTT 179651
|| || || | || |||| || ||||| || || ||||| ||||| ||||||||
Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707
Query 179652 TTGGTCGCAGATCTTCGGGGTTCCGTTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCT 179711
||||| ||||| ||||| || | || || ||||||||| | |||||||||| |||
Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767
Query 179712 GTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAA 179771
|| || ||||| | || | ||| | || | |||| | | || |||| |||||
Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827
Query 179772 TCTTCGTGCTTATGATTTTGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCGA 179831
|| ||||| || || || || ||||||||| | ||||| |||||||||||||| ||
Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887
Query 179832 GACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTACGTGCTTGGTTGGCACCTGC 179891
|| ||||| || ||||| |||||||| || ||||| | ||||| ||| ||||| ||
Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947
Query 179892 TGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAGTCCTACCTAGTGGTAACGCACT 179951
||||| || ||||||||| | | ||||| || || || || || |||| ||||| ||
Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007
Query 179952 GTGATTCAA 179960
| ||||||
Sbjct 3008 TTAATTCAA 3016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605667056154040
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