Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 2e-14
>seq1
Length=2053059
Score = 95.1 bits (104), Expect = 2e-14
Identities = 194/286 (68%), Gaps = 2/286 (1%)
Strand=Plus/Plus
Query 182992 CAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATG 183051
||| | ||||| | ||| || ||||| ||||||||| ||| |||| | | ||| ||
Sbjct 927580 CAATTTGAAAATGGAGAGACTCATGATGATCTATGGAACGCAGCACAGTTGGAAATGGTG 927639
Query 183052 AGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGG 183111
| || || ||||| ||||| | || ||||| ||||| || ||||| | ||||||
Sbjct 927640 CACGGCGGCAAGATGCACGGTTTTATGCGCATGTATTGGGCAAAGAAGATCATGGAATGG 927699
Query 183112 ACAAGAACTCCGGAAGATGCTTT-GAGTTATAGTATCTATATGAACAATAAGTACGAACT 183170
||| | |||| || | ||| | ||||| || || | ||| | || || | ||
Sbjct 927700 ACAGAATCTCCAGATCAAGCTCTCGAGTTCGCCATTC-ATCTCAACGACAAATATCAGCT 927758
Query 183171 AGACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGA 183230
|| ||| || ||| ||||| || ||||| |||||||| || ||| | || ||
Sbjct 927759 GGATGGTCGTGACCCTTCAGGATATGTGGGTTGCATGTGGTCGATCGTGGGAGTCCATGA 927818
Query 183231 TAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATG 183276
|| ||| ||| | || ||||||||||||||| | ||||||
Sbjct 927819 CCAAGGCTGGTCAGAGCGCCCAATATTTGGAAAGATACGTTATATG 927864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903410985439840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |