Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 2e-14 >seq1 Length=2053059 Score = 95.1 bits (104), Expect = 2e-14 Identities = 194/286 (68%), Gaps = 2/286 (1%) Strand=Plus/Plus Query 182992 CAACTCGAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATG 183051 ||| | ||||| | ||| || ||||| ||||||||| ||| |||| | | ||| || Sbjct 927580 CAATTTGAAAATGGAGAGACTCATGATGATCTATGGAACGCAGCACAGTTGGAAATGGTG 927639 Query 183052 AGAGAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGG 183111 | || || ||||| ||||| | || ||||| ||||| || ||||| | |||||| Sbjct 927640 CACGGCGGCAAGATGCACGGTTTTATGCGCATGTATTGGGCAAAGAAGATCATGGAATGG 927699 Query 183112 ACAAGAACTCCGGAAGATGCTTT-GAGTTATAGTATCTATATGAACAATAAGTACGAACT 183170 ||| | |||| || | ||| | ||||| || || | ||| | || || | || Sbjct 927700 ACAGAATCTCCAGATCAAGCTCTCGAGTTCGCCATTC-ATCTCAACGACAAATATCAGCT 927758 Query 183171 AGACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGA 183230 || ||| || ||| ||||| || ||||| |||||||| || ||| | || || Sbjct 927759 GGATGGTCGTGACCCTTCAGGATATGTGGGTTGCATGTGGTCGATCGTGGGAGTCCATGA 927818 Query 183231 TAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATG 183276 || ||| ||| | || ||||||||||||||| | |||||| Sbjct 927819 CCAAGGCTGGTCAGAGCGCCCAATATTTGGAAAGATACGTTATATG 927864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903410985439840