Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq19 666 0.0 >seq19 Length=72585 Score = 666 bits (738), Expect = 0.0 Identities = 739/978 (76%), Gaps = 8/978 (1%) Strand=Plus/Plus Query 19514 TGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCG 19573 ||| | ||||| || | ||||||||||| | || ||||| ||| | | ||||| || Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 19574 TGTCTCCTTGCAGCCACCATCTG-CTTCATTATTGCATTCATTGCGGCTCCACCAGTTGA 19632 | | ||| ||| || | || | ||||| | ||||| ||||| ||||| || || || Sbjct 10244 ACTTTACTTACAG-CAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 19633 CATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATC 19692 || ||||| ||||| || || ||||| || ||| | || |||||||||||||| || Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 19693 GGGAGCCGTCGTTCCGAGCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAG 19751 || || || | || | || | || || |||||||| |||||||||||||| ||||||| Sbjct 10363 TGGTGCTGTAATCCCTA-CATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 10421 Query 19752 CTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACT 19811 | ||| |||||||| ||||| |||||||| || || | ||| ||| | || | |||| Sbjct 10422 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 10481 Query 19812 TCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAA 19871 || |||| || || | | | |||||||| || |||||||| ||| | || |||||| Sbjct 10482 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 10541 Query 19872 TGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTC 19931 || | ||||||||| ||| || ||||||||||| || ||||| || | || || || Sbjct 10542 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601 Query 19932 TCGTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTA 19991 |||| ||||| | ||||||||| ||||| |||| |||||| | ||||| || || | Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661 Query 19992 CGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACA 20051 | ||||||| |||| | |||||||| || || || ||||| || |||||||| ||||||| Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721 Query 20052 TGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTG 20111 |||||||||| ||||||||||||||||| ||||| ||| ||| ||||||||||| || | Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781 Query 20112 TTACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAA 20169 | || || || || | |||||||||||||| | | |||| | ||| || ||||| Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACG--AGTCTGCAAACGCAGGATACAA 10839 Query 20170 GTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTT 20229 ||| || |||||||||||||| || ||||||||||| || || |||||||| |||||| | Sbjct 10840 GTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCT 10899 Query 20230 GATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTG 20289 ||||||||||||||||| |||||||| ||||| || ||||||||||| || ||| Sbjct 10900 TATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTG 10959 Query 20290 GCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAA 20349 ||| || | || || |||||| | || |||| |||| || ||||| || || || || Sbjct 10960 GCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAA 11019 Query 20350 CGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGC 20409 ||| |||||||| |||||||| | | || || || ||||| ||| | || ||||| Sbjct 11020 CGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGC 11079 Query 20410 TGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAA 20469 ||| || | || |||||||| ||||| | || || ||||| || || || ||||| || Sbjct 11080 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 11139 Query 20470 CTTCCCACTTGACCTTGC 20487 |||||||||||||||||| Sbjct 11140 CTTCCCACTTGACCTTGC 11157 Score = 666 bits (738), Expect = 0.0 Identities = 739/978 (76%), Gaps = 8/978 (1%) Strand=Plus/Minus Query 19514 TGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCG 19573 ||| | ||||| || | ||||||||||| | || ||||| ||| | | ||||| || Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 19574 TGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGA 19632 | | ||| |||| || || | ||||| | ||||| ||||| ||||| || || || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 19633 CATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATC 19692 || ||||| ||||| || || ||||| || ||| | || |||||||||||||| || Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 19693 GGGAGCCGTCGTTCCGAGCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAG 19751 || || || | || | || | || || |||||||| |||||||||||||| ||||||| Sbjct 36780 TGGTGCTGTAATCCCTA-CATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 36722 Query 19752 CTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACT 19811 | ||| |||||||| ||||| |||||||| || || | ||| ||| | || | |||| Sbjct 36721 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 36662 Query 19812 TCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAA 19871 || |||| || || | | | |||||||| || |||||||| ||| | || |||||| Sbjct 36661 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 36602 Query 19872 TGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTC 19931 || | ||||||||| ||| || ||||||||||| || ||||| || | || || || Sbjct 36601 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542 Query 19932 TCGTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTA 19991 |||| ||||| | ||||||||| ||||| |||| |||||| | ||||| || || | Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482 Query 19992 CGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACA 20051 | ||||||| |||| | |||||||| || || || ||||| || |||||||| ||||||| Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422 Query 20052 TGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTG 20111 |||||||||| ||||||||||||||||| ||||| ||| ||| ||||||||||| || | Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362 Query 20112 TTACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAA 20169 | || || || || | |||||||||||||| | || ||| | ||| || ||||| Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGA--GTCTGCAAACGCAGGATACAA 36304 Query 20170 GTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTT 20229 ||| || |||||||||||||| || ||||||||||| || || |||||||| |||||| | Sbjct 36303 GTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCT 36244 Query 20230 GATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTG 20289 ||||||||||||||||| |||||||| ||||| || ||||||||||| || ||| Sbjct 36243 TATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTG 36184 Query 20290 GCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAA 20349 ||| || | || || |||||| | || |||| |||| || ||||| || || || || Sbjct 36183 GCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAA 36124 Query 20350 CGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGC 20409 ||| |||||||| |||||||| | | || || || ||||| ||| | || ||||| Sbjct 36123 CGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGC 36064 Query 20410 TGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAA 20469 ||| || | || |||||||| ||||| | || || ||||| || || || ||||| || Sbjct 36063 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 36004 Query 20470 CTTCCCACTTGACCTTGC 20487 |||||||||||||||||| Sbjct 36003 CTTCCCACTTGACCTTGC 35986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148828766420502