Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_025456.1
Length=46547
Score E
Sequences producing significant alignments: (Bits) Value
seq19 666 0.0
>seq19
Length=72585
Score = 666 bits (738), Expect = 0.0
Identities = 739/978 (76%), Gaps = 8/978 (1%)
Strand=Plus/Plus
Query 19514 TGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCG 19573
||| | ||||| || | ||||||||||| | || ||||| ||| | | ||||| ||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 19574 TGTCTCCTTGCAGCCACCATCTG-CTTCATTATTGCATTCATTGCGGCTCCACCAGTTGA 19632
| | ||| ||| || | || | ||||| | ||||| ||||| ||||| || || ||
Sbjct 10244 ACTTTACTTACAG-CAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 19633 CATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATC 19692
|| ||||| ||||| || || ||||| || ||| | || |||||||||||||| ||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 19693 GGGAGCCGTCGTTCCGAGCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAG 19751
|| || || | || | || | || || |||||||| |||||||||||||| |||||||
Sbjct 10363 TGGTGCTGTAATCCCTA-CATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 10421
Query 19752 CTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACT 19811
| ||| |||||||| ||||| |||||||| || || | ||| ||| | || | ||||
Sbjct 10422 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 10481
Query 19812 TCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAA 19871
|| |||| || || | | | |||||||| || |||||||| ||| | || ||||||
Sbjct 10482 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 10541
Query 19872 TGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTC 19931
|| | ||||||||| ||| || ||||||||||| || ||||| || | || || ||
Sbjct 10542 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601
Query 19932 TCGTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTA 19991
|||| ||||| | ||||||||| ||||| |||| |||||| | ||||| || || |
Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661
Query 19992 CGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACA 20051
| ||||||| |||| | |||||||| || || || ||||| || |||||||| |||||||
Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721
Query 20052 TGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTG 20111
|||||||||| ||||||||||||||||| ||||| ||| ||| ||||||||||| || |
Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781
Query 20112 TTACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAA 20169
| || || || || | |||||||||||||| | | |||| | ||| || |||||
Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACG--AGTCTGCAAACGCAGGATACAA 10839
Query 20170 GTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTT 20229
||| || |||||||||||||| || ||||||||||| || || |||||||| |||||| |
Sbjct 10840 GTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCT 10899
Query 20230 GATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTG 20289
||||||||||||||||| |||||||| ||||| || ||||||||||| || |||
Sbjct 10900 TATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTG 10959
Query 20290 GCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAA 20349
||| || | || || |||||| | || |||| |||| || ||||| || || || ||
Sbjct 10960 GCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAA 11019
Query 20350 CGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGC 20409
||| |||||||| |||||||| | | || || || ||||| ||| | || |||||
Sbjct 11020 CGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGC 11079
Query 20410 TGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAA 20469
||| || | || |||||||| ||||| | || || ||||| || || || ||||| ||
Sbjct 11080 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 11139
Query 20470 CTTCCCACTTGACCTTGC 20487
||||||||||||||||||
Sbjct 11140 CTTCCCACTTGACCTTGC 11157
Score = 666 bits (738), Expect = 0.0
Identities = 739/978 (76%), Gaps = 8/978 (1%)
Strand=Plus/Minus
Query 19514 TGGGTCACTTCGACCAACAACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCG 19573
||| | ||||| || | ||||||||||| | || ||||| ||| | | ||||| ||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 19574 TGTCTCCTTGCAGCCACCATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGA 19632
| | ||| |||| || || | ||||| | ||||| ||||| ||||| || || ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 19633 CATTGATGGCATCCGCGAACCCGTATCCGGTAGCCTTCTTTATGGAAACAACATCATATC 19692
|| ||||| ||||| || || ||||| || ||| | || |||||||||||||| ||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 19693 GGGAGCCGTCGTTCCGAGCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAG 19751
|| || || | || | || | || || |||||||| |||||||||||||| |||||||
Sbjct 36780 TGGTGCTGTAATCCCTA-CATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 36722
Query 19752 CTAGTTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACT 19811
| ||| |||||||| ||||| |||||||| || || | ||| ||| | || | ||||
Sbjct 36721 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 36662
Query 19812 TCCTCATTGGCATCTATGCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAA 19871
|| |||| || || | | | |||||||| || |||||||| ||| | || ||||||
Sbjct 36661 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 36602
Query 19872 TGAGGCCTTGGATTTGTGTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTC 19931
|| | ||||||||| ||| || ||||||||||| || ||||| || | || || ||
Sbjct 36601 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542
Query 19932 TCGTCTACCCGTTTGGTCAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTA 19991
|||| ||||| | ||||||||| ||||| |||| |||||| | ||||| || || |
Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482
Query 19992 CGTTCAACTACATGTTGGTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACA 20051
| ||||||| |||| | |||||||| || || || ||||| || |||||||| |||||||
Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422
Query 20052 TGCTTGGTGTGGCTGGTGTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTG 20111
|||||||||| ||||||||||||||||| ||||| ||| ||| ||||||||||| || |
Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362
Query 20112 TTACGTCCTCGCTTGTGCGTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAA 20169
| || || || || | |||||||||||||| | || ||| | ||| || |||||
Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGA--GTCTGCAAACGCAGGATACAA 36304
Query 20170 GTTTGGGCAAGAAGAAGAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTT 20229
||| || |||||||||||||| || ||||||||||| || || |||||||| |||||| |
Sbjct 36303 GTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCT 36244
Query 20230 GATCTTCCAATACGCTTCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTG 20289
||||||||||||||||| |||||||| ||||| || ||||||||||| || |||
Sbjct 36243 TATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTG 36184
Query 20290 GCCGGTGGTAGGGATTTGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAA 20349
||| || | || || |||||| | || |||| |||| || ||||| || || || ||
Sbjct 36183 GCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAA 36124
Query 20350 CGGTTTCAACTTTAACCAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGC 20409
||| |||||||| |||||||| | | || || || ||||| ||| | || |||||
Sbjct 36123 CGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGC 36064
Query 20410 TGACATTCTCAATCGTGCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAA 20469
||| || | || |||||||| ||||| | || || ||||| || || || ||||| ||
Sbjct 36063 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 36004
Query 20470 CTTCCCACTTGACCTTGC 20487
||||||||||||||||||
Sbjct 36003 CTTCCCACTTGACCTTGC 35986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148828766420502
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