Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq19 596 4e-166 >seq19 Length=72585 Score = 596 bits (660), Expect = 4e-166 Identities = 710/958 (74%), Gaps = 4/958 (0%) Strand=Plus/Plus Query 18745 ACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 18804 || || ||||||||||| ||||| ||||| ||| | | ||||| || | | ||| || Sbjct 10196 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 10255 Query 18805 GCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCAT 18863 || ||| | || ||||| | || || |||||||| ||||||||||| || ||||| || Sbjct 10256 GCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTAT 10314 Query 18864 CCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGT 18923 ||| ||||| || | || ||| | || |||||||||||||| || || || || | Sbjct 10315 CCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAAT 10374 Query 18924 TCCGAGCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTG 18982 || | || | || || |||||||| |||||||||||||| |||||||| ||| |||| Sbjct 10375 CCCTA-CATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTG 10433 Query 18983 ATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCG 19042 |||| ||||| |||||||| || || | ||| ||| | || | |||||| |||| || Sbjct 10434 ATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAA 10493 Query 19043 TCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGA 19102 | | | | |||||||| || |||||||| ||| | || |||| ||||| ||||||| Sbjct 10494 TTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGA 10553 Query 19103 TTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCAT 19162 || ||| || ||||| |||||||| || ||||| | || || ||| | || || ||| Sbjct 10554 TTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAA 10613 Query 19163 TTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACA 19222 | ||||| ||||| || || | |||||| | |||||| ||| || ||||||| || Sbjct 10614 TCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCA 10673 Query 19223 TGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCG 19282 || | |||||||||||||| || |||||||| |||||||| ||||||||||| ||||| | Sbjct 10674 TGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTG 10733 Query 19283 CTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGC 19342 ||||||| ||||| || ||||| || ||| ||||||||||| || || || || || | Sbjct 10734 CTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTC 10793 Query 19343 TTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAG 19402 | | ||||| |||||||| | | ||| ||| || |||||||| || ||||||| Sbjct 10794 TCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAG 10853 Query 19403 AAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACG 19462 |||||||||| ||||| || ||||| || || || || || || ||||| ||||| |||| Sbjct 10854 AAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACG 10913 Query 19463 CATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCA 19522 | || |||||||| ||||| || || ||||| | || ||||| || | || | Sbjct 10914 CTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAA 10973 Query 19523 TTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTA 19582 | ||||| | || | || | || ||||| |||||| | || || || ||||| | Sbjct 10974 TCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCA 11033 Query 19583 ACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATC 19642 ||||||| | | || || || ||||| ||| | || |||||||| || | || | Sbjct 11034 ACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACC 11093 Query 19643 GTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700 ||||||||||||| | || ||||||||||| ||||| ||||| |||||||||||||| Sbjct 11094 GTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGA 11151 Score = 596 bits (660), Expect = 4e-166 Identities = 710/958 (74%), Gaps = 4/958 (0%) Strand=Plus/Minus Query 18745 ACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 18804 || || ||||||||||| ||||| ||||| ||| | | ||||| || | | ||| || Sbjct 36947 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 36888 Query 18805 GCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCAT 18863 || ||| | || ||||| | || || |||||||| ||||||||||| || ||||| || Sbjct 36887 GCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTAT 36829 Query 18864 CCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGT 18923 ||| ||||| || | || ||| | || |||||||||||||| || || || || | Sbjct 36828 CCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAAT 36769 Query 18924 TCCGAGCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTG 18982 || | || | || || |||||||| |||||||||||||| |||||||| ||| |||| Sbjct 36768 CCCTA-CATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTG 36710 Query 18983 ATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCG 19042 |||| ||||| |||||||| || || | ||| ||| | || | |||||| |||| || Sbjct 36709 ATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAA 36650 Query 19043 TCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGA 19102 | | | | |||||||| || |||||||| ||| | || |||| ||||| ||||||| Sbjct 36649 TTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGA 36590 Query 19103 TTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCAT 19162 || ||| || ||||| |||||||| || ||||| | || || ||| | || || ||| Sbjct 36589 TTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAA 36530 Query 19163 TTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACA 19222 | ||||| ||||| || || | |||||| | |||||| ||| || ||||||| || Sbjct 36529 TCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCA 36470 Query 19223 TGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCG 19282 || | |||||||||||||| || |||||||| |||||||| ||||||||||| ||||| | Sbjct 36469 TGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTG 36410 Query 19283 CTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGC 19342 ||||||| ||||| || ||||| || ||| ||||||||||| || || || || || | Sbjct 36409 CTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTC 36350 Query 19343 TTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAG 19402 | | ||||| |||||||| | | ||| ||| || |||||||| || ||||||| Sbjct 36349 TCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAG 36290 Query 19403 AAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACG 19462 |||||||||| ||||| || ||||| || || || || || || ||||| ||||| |||| Sbjct 36289 AAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACG 36230 Query 19463 CATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCA 19522 | || |||||||| ||||| || || ||||| | || ||||| || | || | Sbjct 36229 CTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAA 36170 Query 19523 TTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTA 19582 | ||||| | || | || | || ||||| |||||| | || || || ||||| | Sbjct 36169 TCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCA 36110 Query 19583 ACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATC 19642 ||||||| | | || || || ||||| ||| | || |||||||| || | || | Sbjct 36109 ACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACC 36050 Query 19643 GTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700 ||||||||||||| | || ||||||||||| ||||| ||||| |||||||||||||| Sbjct 36049 GTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGA 35992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141148768153302