Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq19 596 4e-166
>seq19
Length=72585
Score = 596 bits (660), Expect = 4e-166
Identities = 710/958 (74%), Gaps = 4/958 (0%)
Strand=Plus/Plus
Query 18745 ACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 18804
|| || ||||||||||| ||||| ||||| ||| | | ||||| || | | ||| ||
Sbjct 10196 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 10255
Query 18805 GCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCAT 18863
|| ||| | || ||||| | || || |||||||| ||||||||||| || ||||| ||
Sbjct 10256 GCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTAT 10314
Query 18864 CCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGT 18923
||| ||||| || | || ||| | || |||||||||||||| || || || || |
Sbjct 10315 CCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAAT 10374
Query 18924 TCCGAGCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTG 18982
|| | || | || || |||||||| |||||||||||||| |||||||| ||| ||||
Sbjct 10375 CCCTA-CATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTG 10433
Query 18983 ATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCG 19042
|||| ||||| |||||||| || || | ||| ||| | || | |||||| |||| ||
Sbjct 10434 ATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAA 10493
Query 19043 TCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGA 19102
| | | | |||||||| || |||||||| ||| | || |||| ||||| |||||||
Sbjct 10494 TTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGA 10553
Query 19103 TTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCAT 19162
|| ||| || ||||| |||||||| || ||||| | || || ||| | || || |||
Sbjct 10554 TTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAA 10613
Query 19163 TTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACA 19222
| ||||| ||||| || || | |||||| | |||||| ||| || ||||||| ||
Sbjct 10614 TCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCA 10673
Query 19223 TGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCG 19282
|| | |||||||||||||| || |||||||| |||||||| ||||||||||| ||||| |
Sbjct 10674 TGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTG 10733
Query 19283 CTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGC 19342
||||||| ||||| || ||||| || ||| ||||||||||| || || || || || |
Sbjct 10734 CTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTC 10793
Query 19343 TTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAG 19402
| | ||||| |||||||| | | ||| ||| || |||||||| || |||||||
Sbjct 10794 TCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAG 10853
Query 19403 AAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACG 19462
|||||||||| ||||| || ||||| || || || || || || ||||| ||||| ||||
Sbjct 10854 AAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACG 10913
Query 19463 CATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCA 19522
| || |||||||| ||||| || || ||||| | || ||||| || | || |
Sbjct 10914 CTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAA 10973
Query 19523 TTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTA 19582
| ||||| | || | || | || ||||| |||||| | || || || ||||| |
Sbjct 10974 TCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCA 11033
Query 19583 ACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATC 19642
||||||| | | || || || ||||| ||| | || |||||||| || | || |
Sbjct 11034 ACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACC 11093
Query 19643 GTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
||||||||||||| | || ||||||||||| ||||| ||||| ||||||||||||||
Sbjct 11094 GTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGA 11151
Score = 596 bits (660), Expect = 4e-166
Identities = 710/958 (74%), Gaps = 4/958 (0%)
Strand=Plus/Minus
Query 18745 ACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCA 18804
|| || ||||||||||| ||||| ||||| ||| | | ||||| || | | ||| ||
Sbjct 36947 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 36888
Query 18805 GCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTAGACATTGATGGCAT 18863
|| ||| | || ||||| | || || |||||||| ||||||||||| || ||||| ||
Sbjct 36887 GCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTAT 36829
Query 18864 CCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATATCGGGAGCCGTCGT 18923
||| ||||| || | || ||| | || |||||||||||||| || || || || |
Sbjct 36828 CCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAAT 36769
Query 18924 TCCGAGCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAATTCACTTG 18982
|| | || | || || |||||||| |||||||||||||| |||||||| ||| ||||
Sbjct 36768 CCCTA-CATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTG 36710
Query 18983 ATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCG 19042
|||| ||||| |||||||| || || | ||| ||| | || | |||||| |||| ||
Sbjct 36709 ATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAA 36650
Query 19043 TCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGA 19102
| | | | |||||||| || |||||||| ||| | || |||| ||||| |||||||
Sbjct 36649 TTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGA 36590
Query 19103 TTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCAT 19162
|| ||| || ||||| |||||||| || ||||| | || || ||| | || || |||
Sbjct 36589 TTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAA 36530
Query 19163 TTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACA 19222
| ||||| ||||| || || | |||||| | |||||| ||| || ||||||| ||
Sbjct 36529 TCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCA 36470
Query 19223 TGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCG 19282
|| | |||||||||||||| || |||||||| |||||||| ||||||||||| ||||| |
Sbjct 36469 TGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTG 36410
Query 19283 CTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGC 19342
||||||| ||||| || ||||| || ||| ||||||||||| || || || || || |
Sbjct 36409 CTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTC 36350
Query 19343 TTGTGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAG 19402
| | ||||| |||||||| | | ||| ||| || |||||||| || |||||||
Sbjct 36349 TCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAG 36290
Query 19403 AAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACG 19462
|||||||||| ||||| || ||||| || || || || || || ||||| ||||| ||||
Sbjct 36289 AAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACG 36230
Query 19463 CATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCA 19522
| || |||||||| ||||| || || ||||| | || ||||| || | || |
Sbjct 36229 CTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAA 36170
Query 19523 TTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTA 19582
| ||||| | || | || | || ||||| |||||| | || || || ||||| |
Sbjct 36169 TCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCA 36110
Query 19583 ACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATC 19642
||||||| | | || || || ||||| ||| | || |||||||| || | || |
Sbjct 36109 ACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACC 36050
Query 19643 GTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
||||||||||||| | || ||||||||||| ||||| ||||| ||||||||||||||
Sbjct 36049 GTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGA 35992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141148768153302
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