Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5 372 4e-98 >seq5 Length=1518631 Score = 372 bits (412), Expect = 4e-98 Identities = 464/633 (73%), Gaps = 2/633 (0%) Strand=Plus/Plus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 ||||||||| | ||||| || | ||| | | | ||||| | | |||||||| ||| Sbjct 815296 ATCTTGAGCGTCGGGAACGGCCTGGGCTCGTTCTCGAGCTGCTTGTAGAGGGGCTCGACG 815355 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||||| ||| ||||| | ||| || | |||||||||||| || ||||| || ||| Sbjct 815356 TGGTTGGAGTACACGTGGGTGTCGCCGCAGCAGTGCACAAAGTCTCCGGGCTTCAGTCCG 815415 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 ||| || ||||||||| |||||||||| |||||||| || ||||||||||| || || Sbjct 815416 CACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTGAAGGGCACACCG 815475 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAA 147111 ||||||||||| | |||||||||||||| ||||||||| | ||| |||| || |||||| Sbjct 815476 AGGCCCATGTCGCACGACCTCTGGTACATCTGGCACGATAACTCACCGTTTGCGACGTAA 815535 Query 147112 AACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAG 147171 |||||||| | ||||||||||| ||||| ||||| | || ||||||||||||| Sbjct 815536 AACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCCGCGGGGTTCCAC 815595 Query 147172 GCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTC 147231 || | || || | |||||| | |||||| |||| |||| ||||| ||| | Sbjct 815596 GCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCGATCACCTCCGCG 815655 Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAA 147290 ||||||||||| ||||| || ||| | | | ||| |||| |||| ||| || || Sbjct 815656 AGCTGGTCCACTCCCTGACCGGTATAG-TCGGCGTGCATGTCCTTGTACTCGGCGCCGAA 815714 Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350 ||| | |||||||||||||||||| ||||| ||||| || || ||||| | ||| Sbjct 815715 GTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCTGTGACCCAGGCC 815774 Query 147351 CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410 | | | ||| ||||| || |||| ||||||| ||| | ||||| | Sbjct 815775 GACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAATGTCCTTGTCCTG 815834 Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCT 147470 ||| ||||| | | ||| ||||| || |||||||| ||||||||| || ||||| Sbjct 815835 GAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCTCCGCGACGCCCCT 815894 Query 147471 CCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 ||| ||||| | ||||||||| ||||| ||||| Sbjct 815895 CCAGAAGACACGCTTGGTGGTGAGCAGCGGGAA 815927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487861421600