Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq5 372 4e-98
>seq5
Length=1518631
Score = 372 bits (412), Expect = 4e-98
Identities = 464/633 (73%), Gaps = 2/633 (0%)
Strand=Plus/Plus
Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931
||||||||| | ||||| || | ||| | | | ||||| | | |||||||| |||
Sbjct 815296 ATCTTGAGCGTCGGGAACGGCCTGGGCTCGTTCTCGAGCTGCTTGTAGAGGGGCTCGACG 815355
Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991
|||||| ||| ||||| | ||| || | |||||||||||| || ||||| || |||
Sbjct 815356 TGGTTGGAGTACACGTGGGTGTCGCCGCAGCAGTGCACAAAGTCTCCGGGCTTCAGTCCG 815415
Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051
||| || ||||||||| |||||||||| |||||||| || ||||||||||| || ||
Sbjct 815416 CACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTGAAGGGCACACCG 815475
Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAA 147111
||||||||||| | |||||||||||||| ||||||||| | ||| |||| || ||||||
Sbjct 815476 AGGCCCATGTCGCACGACCTCTGGTACATCTGGCACGATAACTCACCGTTTGCGACGTAA 815535
Query 147112 AACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAG 147171
|||||||| | ||||||||||| ||||| ||||| | || |||||||||||||
Sbjct 815536 AACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCCGCGGGGTTCCAC 815595
Query 147172 GCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTC 147231
|| | || || | |||||| | |||||| |||| |||| ||||| ||| |
Sbjct 815596 GCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCGATCACCTCCGCG 815655
Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCA-GTCCACGTACCTGGCCCCAAA 147290
||||||||||| ||||| || ||| | | | ||| |||| |||| ||| || ||
Sbjct 815656 AGCTGGTCCACTCCCTGACCGGTATAG-TCGGCGTGCATGTCCTTGTACTCGGCGCCGAA 815714
Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350
||| | |||||||||||||||||| ||||| ||||| || || ||||| | |||
Sbjct 815715 GTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCTGTGACCCAGGCC 815774
Query 147351 CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410
| | | ||| ||||| || |||| ||||||| ||| | ||||| |
Sbjct 815775 GACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAATGTCCTTGTCCTG 815834
Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCT 147470
||| ||||| | | ||| ||||| || |||||||| ||||||||| || |||||
Sbjct 815835 GAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCTCCGCGACGCCCCT 815894
Query 147471 CCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503
||| ||||| | ||||||||| ||||| |||||
Sbjct 815895 CCAGAAGACACGCTTGGTGGTGAGCAGCGGGAA 815927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487861421600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |