Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq19 832 0.0 >seq19 Length=72585 Score = 832 bits (922), Expect = 0.0 Identities = 771/975 (79%), Gaps = 2/975 (0%) Strand=Plus/Plus Query 157685 TGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTGATGATTCCT 157744 ||| | || ||||| | |||||| | || | ||||||||||| ||| | ||||| ||| Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 157745 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 157803 || || ||| | |||||| || || |||||||| || || | |||||||| ||||| || Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 157804 CATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 157863 || || || ||||| || ||||| |||| ||||| ||||| || |||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 157864 TGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGC 157923 |||||| || | |||| || ||||| ||||| || ||||||||||| ||||||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 157924 AGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTT 157983 ||| |||||||| |||||||| || ||||||||||||| ||| ||| | |||| ||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 157984 CCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTAT 158043 | | ||||| || | | | || ||||| ||||||||||| || |||| ||||||||| || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 158044 GCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCT 158103 ||| || ||||| |||||| || |||||||| || || ||||| | || |||||| | Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602 Query 158104 AGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 158163 || || || ||||||| ||||||||||| |||| |||||||||||||| ||||| || Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662 Query 158164 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 158223 ||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| || Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722 Query 158224 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGT 158283 ||| ||||||||||| ||||||||||| || ||||||||||| ||||| || ||||| Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782 Query 158284 TACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTT 158343 ||||| || ||| | ||||| || ||||| | ||||| ||| || || ||||| Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842 Query 158344 CGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGAT 158403 ||| |||||||||||||| ||||||||||| || || || || |||||||| ||| | || Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902 Query 158404 CTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCC 158463 ||||||||||||||||||||||||||| ||||| | ||||||||||| || ||||| Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962 Query 158464 TGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGG 158523 || | || ||||||||||| || | || | ||||| ||||| |||||||| ||||| Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022 Query 158524 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 158583 ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| || Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 11082 Query 158584 TGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158643 | | | ||||| ||| || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 11083 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 11142 Query 158644 CCCACTGGATCTTGC 158658 |||||| || ||||| Sbjct 11143 CCCACTTGACCTTGC 11157 Score = 832 bits (922), Expect = 0.0 Identities = 771/975 (79%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 157685 TGGGTAACCTCAACCAACAACCGTTTGTATGTTGGTTGGTTCGGTGTACTGATGATTCCT 157744 ||| | || ||||| | |||||| | || | ||||||||||| ||| | ||||| ||| Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 157745 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 157803 || || ||| | |||||| || || |||||||| || || | |||||||| ||||| || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 157804 CATTGACGGCATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGTAACAACATCATCTC 157863 || || || ||||| || ||||| |||| ||||| ||||| || |||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 157864 TGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTCCACTTCTACCCCATCTGGGAAGC 157923 |||||| || | |||| || ||||| ||||| || ||||||||||| ||||||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 157924 AGCATCTCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTAGTATTCCACTT 157983 ||| |||||||| |||||||| || ||||||||||||| ||| ||| | |||| ||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 157984 CCTGATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTCTCTTACCGTTTAGGTAT 158043 | | ||||| || | | | || ||||| ||||||||||| || |||| ||||||||| || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 158044 GCGCCCATGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCGAGTGCAGTATTCCT 158103 ||| || ||||| |||||| || |||||||| || || ||||| | || |||||| | Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541 Query 158104 AGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 158163 || || || ||||||| ||||||||||| |||| |||||||||||||| ||||| || Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481 Query 158164 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 158223 ||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| || Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421 Query 158224 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTCGT 158283 ||| ||||||||||| ||||||||||| || ||||||||||| ||||| || ||||| Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361 Query 158284 TACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTT 158343 ||||| || ||| | ||||| || ||||| | ||||| ||| || || ||||| Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301 Query 158344 CGGTCAAGAAGAAGAGACCTACAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGAT 158403 ||| |||||||||||||| ||||||||||| || || || || |||||||| ||| | || Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241 Query 158404 CTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCC 158463 ||||||||||||||||||||||||||| ||||| | ||||||||||| || ||||| Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181 Query 158464 TGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGG 158523 || | || ||||||||||| || | || | ||||| ||||| |||||||| ||||| Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121 Query 158524 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAGA 158583 ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| || Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 36061 Query 158584 TGTACTGAACCGCGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 158643 | | | ||||| ||| || ||||||||||| ||||| ||||||||||| |||||||| Sbjct 36060 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 36001 Query 158644 CCCACTGGATCTTGC 158658 |||||| || ||||| Sbjct 36000 CCCACTTGACCTTGC 35986 Score = 646 bits (716), Expect = 1e-180 Identities = 766/1034 (74%), Gaps = 3/1034 (0%) Strand=Plus/Plus Query 159373 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGG 159432 || |||||||| | | || ||||||||||| || ||||| || || || || |||||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 159433 TCTGGACTCCTACTTCTTCCCA-CTGCTTATATGGCCATTGGCGGTTGGCTTACTGGCAC 159491 || ||| | || || |||||| ||| || | || |||| || ||| ||||||| || Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 159492 GACTTTTATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCTAA 159551 || || | || |||||||| |||||| | || ||||| |||||||| || ||| Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 159552 TTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 159611 || || || | || || ||||| || || | ||||| ||| || |||||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 159612 TTGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTGGTC 159671 |||||| || || | ||||| || ||| ||| ||||| || ||||| || | ||| | Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 159672 CTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGAAAT 159731 || || || || ||||||||||||| | || || |||||||| || ||||||||||| Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 159732 TGCTCGTCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 159791 ||| ||| ||| || ||||| ||||| || ||||| ||||| | ||||| ||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 159792 TTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAG 159851 ||||| ||||||||||| || ||||| || || || |||||||||||||||| Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 159852 TTTCGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGAC 159911 || || ||||| | ||| || | ||| | | ||| | || || |||||||||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 159912 CCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTGTGC 159971 || ||||| ||||| ||||||||||| |||||| |||| || | |||||| | ||||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 159972 AATCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACACATT 160031 || || || || ||||||||||||||| | || |||||||| || ||||||| || Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 160032 TAAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTT 160091 || ||| | || ||||||| ||||||||||| || ||||| || |||||||| || Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 160092 CTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTT 160151 |||||| ||||| |||||||| || || ||||||||||| |||||||| || || ||| | Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 160152 GTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTTCAA 160211 || || ||||| | || |||||| || | |||| || | || | || | || Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 160212 CCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTAGAGCAGCAGAAGATCCTGAATTTGA 160271 ||| ||||| ||||| ||||| || ||||| | ||||| ||||||||||| ||||| Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 160272 GACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCACCTGC 160331 || |||||||| ||||| || || | || ||||| ||||||| ||||||||| || Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947 Query 160332 TGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACCTAGAGGTAACGCACT 160391 ||||| || ||||||||| || | ||||||||||| ||||| || | || ||||| || Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Query 160392 GTGATTAAATCACT 160405 | ||| || |||| Sbjct 3008 TTAATTCAA-CACT 3020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573023863906800