Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq19 839 0.0 >seq19 Length=72585 Score = 839 bits (930), Expect = 0.0 Identities = 775/977 (79%), Gaps = 6/977 (1%) Strand=Plus/Plus Query 159969 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 160028 ||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| || Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 160029 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 160087 ||| | | |||||| | || || |||||||| || || | |||||||| ||||| || Sbjct 10244 ACTTTACTTACAGCAA-CTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 160088 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 160147 ||||| || |||||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 160148 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 160207 |||||| || | || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 160208 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTT 160267 || || |||||||||||||| || ||||||||||||| ||| || | |||| |||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 160268 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTAT 160327 | | ||||| || | | |||| ||||| ||||||||||| ||||| | ||||||||| || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 160328 GCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 160387 ||| || ||||| |||||| || |||||||| || || |||||| | ||||||||| | Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602 Query 160388 CGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 160447 |||||| || ||||||| ||||||||||| |||| |||||||||||||| ||||| || Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662 Query 160448 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 160507 ||| |||| |||| | |||||||| || || ||||| ||||||||||| || |||||||| Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722 Query 160508 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGT 160567 ||| || |||||||| ||||||||||| || | |||||||| |||||||| ||||| Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782 Query 160568 TACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTT 160627 ||||| || ||| | ||||| || ||||| | ||||| ||| || || ||||| Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842 Query 160628 CGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 160687 ||| ||||| |||||||| ||||||||||| || || || ||||||||||| ||| | || Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902 Query 160688 CTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCC 160747 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||| ||||| Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962 Query 160748 TGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGG 160807 ||| | |||||||||||||| ||| | ||| || || ||||| |||||||| ||||| Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022 Query 160808 TTTCAACTTCAACCAGTCCATCCTCGATGGTCAA--GGTCGTGTACTGAACACCTGGGCA 160865 ||||||||||||||||| | | ||| |||| || |||||| | ||||| ||||| Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGCT 11080 Query 160866 GACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 160925 || | | || |||||| || ||||||||||| ||||| ||||||||||| |||||| Sbjct 11081 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 11140 Query 160926 TTCCCACTCGACCTCGC 160942 |||||||| ||||| || Sbjct 11141 TTCCCACTTGACCTTGC 11157 Score = 839 bits (930), Expect = 0.0 Identities = 775/977 (79%), Gaps = 6/977 (1%) Strand=Plus/Minus Query 159969 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 160028 ||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| || Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 160029 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 160087 ||| | | ||||||| || || |||||||| || || | |||||||| ||||| || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 160088 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 160147 ||||| || |||||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 160148 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 160207 |||||| || | || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 160208 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTT 160267 || || |||||||||||||| || ||||||||||||| ||| || | |||| |||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 160268 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTAT 160327 | | ||||| || | | |||| ||||| ||||||||||| ||||| | ||||||||| || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 160328 GCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 160387 ||| || ||||| |||||| || |||||||| || || |||||| | ||||||||| | Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541 Query 160388 CGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 160447 |||||| || ||||||| ||||||||||| |||| |||||||||||||| ||||| || Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481 Query 160448 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 160507 ||| |||| |||| | |||||||| || || ||||| ||||||||||| || |||||||| Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421 Query 160508 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGT 160567 ||| || |||||||| ||||||||||| || | |||||||| |||||||| ||||| Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361 Query 160568 TACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTT 160627 ||||| || ||| | ||||| || ||||| | ||||| ||| || || ||||| Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301 Query 160628 CGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 160687 ||| ||||| |||||||| ||||||||||| || || || ||||||||||| ||| | || Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241 Query 160688 CTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCC 160747 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||| ||||| Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181 Query 160748 TGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGG 160807 ||| | |||||||||||||| ||| | ||| || || ||||| |||||||| ||||| Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121 Query 160808 TTTCAACTTCAACCAGTCCATCCTCGATGGTCAA--GGTCGTGTACTGAACACCTGGGCA 160865 ||||||||||||||||| | | ||| |||| || |||||| | ||||| ||||| Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGCT 36063 Query 160866 GACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 160925 || | | || |||||| || ||||||||||| ||||| ||||||||||| |||||| Sbjct 36062 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 36003 Query 160926 TTCCCACTCGACCTCGC 160942 |||||||| ||||| || Sbjct 36002 TTCCCACTTGACCTTGC 35986 Score = 632 bits (700), Expect = 2e-176 Identities = 759/1026 (74%), Gaps = 4/1026 (0%) Strand=Plus/Plus Query 161682 GGGTGGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGG 161741 || |||||||||| | |||||||||||||| || ||||||||||| || || || ||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 161742 TCTGGACTTCTTCTTCTTCCCA-CTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCAC 161800 || ||| || || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 161801 AACTTTCGCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAA 161860 ||| |||| ||| ||||| || || ||| | || ||||| || |||||||| || Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 161861 CTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCT 161920 ||| |||||| || |||| || ||| || || ||||| ||| || |||||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 161921 CTGGGGTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAA 161980 ||||| || || || ||||| || ||| || ||| || ||||| ||| | |||| Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 161981 TTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACT 162040 || || ||||| || ||||| |||| |||| ||||| ||||||||||| |||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 162041 GGCACGTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 162100 |||||| | || ||||| ||||| || ||||| ||||| | ||||| ||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 162101 TTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTC 162160 ||||| || |||||||| |||||| | || || || | ||||| || || || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 162161 CTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTT-CAAGGATTCCATAACTGGA 162219 ||||| || || | ||| || | ||| | | |||||| ||||| ||||| ||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCAT-TCTTTTCTTCCAAGGGTTCCACAACTGGA 2526 Query 162220 CCCTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTG 162279 | || ||||| ||||| ||||||||||| |||||| |||| || | ||||||||| | || Sbjct 2527 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTG 2586 Query 162280 CTATTCACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCT 162339 | |||||||||| || || || || ||| | | ||| ||||| || ||||||| | Sbjct 2587 CGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTT 2646 Query 162340 TTAAGGCGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCT 162399 | || ||| | | || || | ||||||||||| || ||||| || |||||||| | Sbjct 2647 TCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTT 2706 Query 162400 TCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGT 162459 ||||||| ||||| |||||| | || || ||||||||||| |||||||| || || ||| Sbjct 2707 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGC 2766 Query 162460 TGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCA 162519 | || || ||||| | || |||||| || | |||| || | || | || || | Sbjct 2767 TTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTA 2826 Query 162520 ACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTG 162579 |||| ||||| ||||| ||||| || |||||| | ||||| |||||||||||||||| Sbjct 2827 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTG 2886 Query 162580 AAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTG 162639 |||| |||||||||||||| ||||| || || ||||| | ||||||||| | ||| || Sbjct 2887 AAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTC 2946 Query 162640 CCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCC 162699 || || || ||||| ||| || | ||||| || || || ||||| | || ||||| | Sbjct 2947 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 3006 Query 162700 TTTAAT 162705 |||||| Sbjct 3007 TTTAAT 3012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559503867117800