Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_026924.1
Length=174885
Score E
Sequences producing significant alignments: (Bits) Value
seq19 839 0.0
>seq19
Length=72585
Score = 839 bits (930), Expect = 0.0
Identities = 775/977 (79%), Gaps = 6/977 (1%)
Strand=Plus/Plus
Query 159969 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 160028
||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 160029 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 160087
||| | | |||||| | || || |||||||| || || | |||||||| ||||| ||
Sbjct 10244 ACTTTACTTACAGCAA-CTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 160088 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 160147
||||| || |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 160148 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 160207
|||||| || | || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 160208 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTT 160267
|| || |||||||||||||| || ||||||||||||| ||| || | |||| ||||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 160268 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTAT 160327
| | ||||| || | | |||| ||||| ||||||||||| ||||| | ||||||||| ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 160328 GCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 160387
||| || ||||| |||||| || |||||||| || || |||||| | ||||||||| |
Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602
Query 160388 CGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 160447
|||||| || ||||||| ||||||||||| |||| |||||||||||||| ||||| ||
Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662
Query 160448 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 160507
||| |||| |||| | |||||||| || || ||||| ||||||||||| || ||||||||
Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722
Query 160508 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGT 160567
||| || |||||||| ||||||||||| || | |||||||| |||||||| |||||
Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782
Query 160568 TACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTT 160627
||||| || ||| | ||||| || ||||| | ||||| ||| || || |||||
Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842
Query 160628 CGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 160687
||| ||||| |||||||| ||||||||||| || || || ||||||||||| ||| | ||
Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902
Query 160688 CTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCC 160747
||||||||| || |||||||||||||| |||||||| ||||||||||| ||| |||||
Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962
Query 160748 TGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGG 160807
||| | |||||||||||||| ||| | ||| || || ||||| |||||||| |||||
Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022
Query 160808 TTTCAACTTCAACCAGTCCATCCTCGATGGTCAA--GGTCGTGTACTGAACACCTGGGCA 160865
||||||||||||||||| | | ||| |||| || |||||| | ||||| |||||
Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGCT 11080
Query 160866 GACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 160925
|| | | || |||||| || ||||||||||| ||||| ||||||||||| ||||||
Sbjct 11081 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 11140
Query 160926 TTCCCACTCGACCTCGC 160942
|||||||| ||||| ||
Sbjct 11141 TTCCCACTTGACCTTGC 11157
Score = 839 bits (930), Expect = 0.0
Identities = 775/977 (79%), Gaps = 6/977 (1%)
Strand=Plus/Minus
Query 159969 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 160028
||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 160029 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 160087
||| | | ||||||| || || |||||||| || || | |||||||| ||||| ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 160088 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 160147
||||| || |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 160148 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 160207
|||||| || | || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 160208 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTTCACTT 160267
|| || |||||||||||||| || ||||||||||||| ||| || | |||| ||||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 160268 CCTTATCGGCATCTATGCATATATGGGACGTGAGTGGGAACTTTCATACCGTTTAGGTAT 160327
| | ||||| || | | |||| ||||| ||||||||||| ||||| | ||||||||| ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 160328 GCGCCCCTGGATCTGTGTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCCT 160387
||| || ||||| |||||| || |||||||| || || |||||| | ||||||||| |
Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541
Query 160388 CGTATATCCTTTCGGTCAAGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTAC 160447
|||||| || ||||||| ||||||||||| |||| |||||||||||||| ||||| ||
Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481
Query 160448 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 160507
||| |||| |||| | |||||||| || || ||||| ||||||||||| || ||||||||
Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421
Query 160508 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTTTGTTCTCTGCTATGCACGGAAGTCTCGT 160567
||| || |||||||| ||||||||||| || | |||||||| |||||||| |||||
Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361
Query 160568 TACTTCCTCACTCGTTCGTGAAACGACTGAAACAGAGTCACAGAACTACGGTTATAAGTT 160627
||||| || ||| | ||||| || ||||| | ||||| ||| || || |||||
Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301
Query 160628 CGGTCAAGAGGAAGAGACCTACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGAT 160687
||| ||||| |||||||| ||||||||||| || || || ||||||||||| ||| | ||
Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241
Query 160688 CTTCCAATATGCATCATTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCC 160747
||||||||| || |||||||||||||| |||||||| ||||||||||| ||| |||||
Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181
Query 160748 TGTAGTCGGAATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACGG 160807
||| | |||||||||||||| ||| | ||| || || ||||| |||||||| |||||
Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121
Query 160808 TTTCAACTTCAACCAGTCCATCCTCGATGGTCAA--GGTCGTGTACTGAACACCTGGGCA 160865
||||||||||||||||| | | ||| |||| || |||||| | ||||| |||||
Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGCT 36063
Query 160866 GACGTACTGAATCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 160925
|| | | || |||||| || ||||||||||| ||||| ||||||||||| ||||||
Sbjct 36062 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 36003
Query 160926 TTCCCACTCGACCTCGC 160942
|||||||| ||||| ||
Sbjct 36002 TTCCCACTTGACCTTGC 35986
Score = 632 bits (700), Expect = 2e-176
Identities = 759/1026 (74%), Gaps = 4/1026 (0%)
Strand=Plus/Plus
Query 161682 GGGTGGTTTGACATACTCGACGACTGGCTTAAACGGGATCGTTTCGTTTTTGTTGGCTGG 161741
|| |||||||||| | |||||||||||||| || ||||||||||| || || || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 161742 TCTGGACTTCTTCTTCTTCCCA-CTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGCAC 161800
|| ||| || || || |||||| ||| || |||| |||| || ||| ||||||| ||
Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 161801 AACTTTCGCAACGAGCTGGTATACCCATGGTCTCGCTAGTTCCTATCTTGAGGGTGCAAA 161860
||| |||| ||| ||||| || || ||| | || ||||| || |||||||| ||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 161861 CTTTCTTACAGCGTCAGTTAGCACTCCAGCTGACGCTATGGGTCATTCTCTTCTTCTTCT 161920
||| |||||| || |||| || ||| || || ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 161921 CTGGGGTCCTGAGGCTCAAGGGGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGAA 161980
||||| || || || ||||| || ||| || ||| || ||||| ||| | ||||
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 161981 TTTTGTGGCACTCCATGGTGCCTTCGCCCTAATTGGATTCATGCTCCGTCAGTTTGAACT 162040
|| || ||||| || ||||| |||| |||| ||||| ||||||||||| |||||| |
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 162041 GGCACGTCTTATTGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 162100
|||||| | || ||||| ||||| || ||||| ||||| | ||||| |||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 162101 TTTTGTCAGCGTCTTCCTTATCTACCCATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTC 162160
||||| || |||||||| |||||| | || || || | ||||| || || || ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 162161 CTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTTCTT-CAAGGATTCCATAACTGGA 162219
||||| || || | ||| || | ||| | | |||||| ||||| ||||| |||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCAT-TCTTTTCTTCCAAGGGTTCCACAACTGGA 2526
Query 162220 CCCTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTTCTATCTG 162279
| || ||||| ||||| ||||||||||| |||||| |||| || | ||||||||| | ||
Sbjct 2527 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTG 2586
Query 162280 CTATTCACGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAACAAGCAAACACCT 162339
| |||||||||| || || || || ||| | | ||| ||||| || ||||||| |
Sbjct 2587 CGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTT 2646
Query 162340 TTAAGGCGTTTGATTCGACACAGGAGGAAGAGACTTATTCTATGGTCACTGCAAACCGCT 162399
| || ||| | | || || | ||||||||||| || ||||| || |||||||| |
Sbjct 2647 TCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTT 2706
Query 162400 TCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGT 162459
||||||| ||||| |||||| | || || ||||||||||| |||||||| || || |||
Sbjct 2707 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGC 2766
Query 162460 TGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCA 162519
| || || ||||| | || |||||| || | |||| || | || | || || |
Sbjct 2767 TTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTA 2826
Query 162520 ACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCTGAGTTTG 162579
|||| ||||| ||||| ||||| || |||||| | ||||| ||||||||||||||||
Sbjct 2827 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTG 2886
Query 162580 AAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGACTACGTGCATGGTTAGCACCTG 162639
|||| |||||||||||||| ||||| || || ||||| | ||||||||| | ||| ||
Sbjct 2887 AAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTC 2946
Query 162640 CCGACCAACCCCATGAGAACTTTATCTTCCCAGAAGAAGTTCTTCCTAGAGGCAACGCCC 162699
|| || || ||||| ||| || | ||||| || || || ||||| | || ||||| |
Sbjct 2947 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 3006
Query 162700 TTTAAT 162705
||||||
Sbjct 3007 TTTAAT 3012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 559503867117800
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