Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq19 780 0.0
>seq19
Length=72585
Score = 780 bits (864), Expect = 0.0
Identities = 759/977 (78%), Gaps = 0/977 (0%)
Strand=Plus/Plus
Query 174468 TTTTGTTCCTGGGTCACATCAACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTA 174527
|||||||| ||| | || ||||| | || ||||||||| ||||||||||||| || ||
Sbjct 10175 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 10234
Query 174528 ATGATTCCTACATTGTTAGCCGCAACTGTATGTTTCATTATCGCTTTCGTGGGTGCTCCC 174587
||||| ||||| || | | |||||| | ||||| | || || | | ||||||
Sbjct 10235 ATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCT 10294
Query 174588 CCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAAC 174647
|| || || ||||| || |||||||| |||||| |||| ||||| ||||| |||||||||
Sbjct 10295 CCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 10354
Query 174648 ATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATC 174707
|||||||||||||| || | |||| || ||||| ||||| || |||||||||||||||
Sbjct 10355 ATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATC 10414
Query 174708 TGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTC 174767
||||||||||| | || || || ||||| |||||||||||||||| ||| || | ||
Sbjct 10415 TGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTA 10474
Query 174768 TTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGT 174827
| |||||| | || || || | | || ||||| ||||||||||| || |||| |||
Sbjct 10475 TGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGT 10534
Query 174828 TTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCA 174887
||||| ||| | |||||||| |||||| |||||||| || || |||||||| ||||
Sbjct 10535 TTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCT 10594
Query 174888 GTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATC 174947
|||||| | || || || ||||||| ||||| ||||| || | ||||| | |||||
Sbjct 10595 GTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATT 10654
Query 174948 TCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCC 175007
|||||||| ||||||| |||| | || ||||| || || || |||||| | ||||||||
Sbjct 10655 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 10714
Query 175008 TTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGT 175067
||||||||| | || || || ||||| |||||||||||| | ||||| || ||||| |||
Sbjct 10715 TTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGT 10774
Query 175068 TCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGT 175127
||||| || || || || || |||||||||| ||||| | ||||| ||| ||
Sbjct 10775 TCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGA 10834
Query 175128 TACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGT 175187
||||||||||| |||||||||||||| || |||||||| || || || || ||||||||
Sbjct 10835 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGA 10894
Query 175188 CGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCC 175247
||| | |||||||||||||||||||||||||||||||| ||||||||||||||| | ||
Sbjct 10895 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCA 10954
Query 175248 GCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAAC 175307
|||||||| |||| ||||||||||| || | ||| |||| || ||||| ||||||
Sbjct 10955 ATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAAC 11014
Query 175308 CTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACC 175367
|| || || |||||||||||||||||||| | || | | || | ||| | |||||
Sbjct 11015 CTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACA 11074
Query 175368 TGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCA 175427
||||| ||| | | ||| | ||| || || |||||||||||||| ||| | || ||
Sbjct 11075 TGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCT 11134
Query 175428 CACAACTTCCCACTAGA 175444
|||||||||||||| ||
Sbjct 11135 CACAACTTCCCACTTGA 11151
Score = 780 bits (864), Expect = 0.0
Identities = 759/977 (78%), Gaps = 0/977 (0%)
Strand=Plus/Minus
Query 174468 TTTTGTTCCTGGGTCACATCAACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTA 174527
|||||||| ||| | || ||||| | || ||||||||| ||||||||||||| || ||
Sbjct 36968 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 36909
Query 174528 ATGATTCCTACATTGTTAGCCGCAACTGTATGTTTCATTATCGCTTTCGTGGGTGCTCCC 174587
||||| ||||| || | | |||||| | ||||| | || || | | ||||||
Sbjct 36908 ATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCT 36849
Query 174588 CCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAAC 174647
|| || || ||||| || |||||||| |||||| |||| ||||| ||||| |||||||||
Sbjct 36848 CCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 36789
Query 174648 ATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATC 174707
|||||||||||||| || | |||| || ||||| ||||| || |||||||||||||||
Sbjct 36788 ATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATC 36729
Query 174708 TGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTC 174767
||||||||||| | || || || ||||| |||||||||||||||| ||| || | ||
Sbjct 36728 TGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTA 36669
Query 174768 TTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGT 174827
| |||||| | || || || | | || ||||| ||||||||||| || |||| |||
Sbjct 36668 TGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGT 36609
Query 174828 TTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCA 174887
||||| ||| | |||||||| |||||| |||||||| || || |||||||| ||||
Sbjct 36608 TTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCT 36549
Query 174888 GTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATC 174947
|||||| | || || || ||||||| ||||| ||||| || | ||||| | |||||
Sbjct 36548 GTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATT 36489
Query 174948 TCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCC 175007
|||||||| ||||||| |||| | || ||||| || || || |||||| | ||||||||
Sbjct 36488 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 36429
Query 175008 TTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGT 175067
||||||||| | || || || ||||| |||||||||||| | ||||| || ||||| |||
Sbjct 36428 TTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGT 36369
Query 175068 TCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGT 175127
||||| || || || || || |||||||||| ||||| | ||||| ||| ||
Sbjct 36368 TCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGA 36309
Query 175128 TACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGT 175187
||||||||||| |||||||||||||| || |||||||| || || || || ||||||||
Sbjct 36308 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGA 36249
Query 175188 CGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCC 175247
||| | |||||||||||||||||||||||||||||||| ||||||||||||||| | ||
Sbjct 36248 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCA 36189
Query 175248 GCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAAC 175307
|||||||| |||| ||||||||||| || | ||| |||| || ||||| ||||||
Sbjct 36188 ATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAAC 36129
Query 175308 CTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACC 175367
|| || || |||||||||||||||||||| | || | | || | ||| | |||||
Sbjct 36128 CTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACA 36069
Query 175368 TGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCA 175427
||||| ||| | | ||| | ||| || || |||||||||||||| ||| | || ||
Sbjct 36068 TGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCT 36009
Query 175428 CACAACTTCCCACTAGA 175444
|||||||||||||| ||
Sbjct 36008 CACAACTTCCCACTTGA 35992
Score = 518 bits (574), Expect = 5e-142
Identities = 729/1018 (72%), Gaps = 4/1018 (0%)
Strand=Plus/Plus
Query 175845 GGGTGGTATGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGG 175904
|| |||| ||| | | || ||||||||| | ||| | || | || | || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 175905 TCTGGATTACTACTTCTTCCCAC-TGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCAC 175963
|| ||| | || || |||||| ||| || |||| |||| || ||| ||||||| ||
Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 175964 AACTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAA 176023
||| || || || |||||||| || ||| | || ||| || |||||||| |||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 176024 CTTTCTCACAGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 176083
||| || ||| |||| || || || || || | ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 176084 TTGGGGTCCTGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTC 176143
|||||| || ||| | || || || ||| || ||| || ||||| || | ||| |
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 176144 CTTTGTTGCTCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACT 176203
|| || || || |||||||| |||| | || ||||| ||||| ||||| |||||| |
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 176204 GGCAAGACTCATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGT 176263
||| | | || ||||| |||||||| ||||||||| | |||||||||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 176264 ATTTGTCAGTGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTC 176323
|||||| ||| || ||| | |||||||| || ||||| ||||||||||| || ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 176324 CTTTGGTGTGGCAGCAATCTTTAGATTCCTATTGTTTCTT-CAGGGTTTCCACAACTGGA 176382
|||||||| || | ||| || | ||| | | |||||| || || |||||||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCAT-TCTTTTCTTCCAAGGGTTCCACAACTGGA 2526
Query 176383 CACTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTG 176442
|||| ||||| ||||| ||||||||||| |||||| |||| || | |||||| || | ||
Sbjct 2527 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTG 2586
Query 176443 CAATCCATGGCGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCT 176502
| || || || | ||||| || || || || | |||||||| || ||||| |
Sbjct 2587 CGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTT 2646
Query 176503 TCACTGCGTTCGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCT 176562
|| ||| || | | || || | |||||||| || || ||||| || || ||||| |
Sbjct 2647 TCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTT 2706
Query 176563 TCTGGTCGCAAATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGT 176622
||||||| || || ||||| || || || ||| ||||||||||||||||||||||||
Sbjct 2707 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGC 2766
Query 176623 TGTTTGTCCCTGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTA 176682
| || || ||||| | || | ||| | ||| |||| | | || | || ||||
Sbjct 2767 TTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTA 2826
Query 176683 ATCTTCGTGCTTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTG 176742
| || ||||| || || || || |||||||| | ||||| ||||||||||||||||
Sbjct 2827 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTG 2886
Query 176743 AAACTTTCTACACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTG 176802
|||| |||||||| ||||| || |||||||||||||| | | |||||||||||| ||
Sbjct 2887 AAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTC 2946
Query 176803 TGGATCAACCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860
||||| || ||||| |||||||||| || || || || || | || |||||
Sbjct 2947 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 3004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729929426641720
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