Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq19 780 0.0 >seq19 Length=72585 Score = 780 bits (864), Expect = 0.0 Identities = 759/977 (78%), Gaps = 0/977 (0%) Strand=Plus/Plus Query 174468 TTTTGTTCCTGGGTCACATCAACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTA 174527 |||||||| ||| | || ||||| | || ||||||||| ||||||||||||| || || Sbjct 10175 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 10234 Query 174528 ATGATTCCTACATTGTTAGCCGCAACTGTATGTTTCATTATCGCTTTCGTGGGTGCTCCC 174587 ||||| ||||| || | | |||||| | ||||| | || || | | |||||| Sbjct 10235 ATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCT 10294 Query 174588 CCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAAC 174647 || || || ||||| || |||||||| |||||| |||| ||||| ||||| ||||||||| Sbjct 10295 CCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 10354 Query 174648 ATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATC 174707 |||||||||||||| || | |||| || ||||| ||||| || ||||||||||||||| Sbjct 10355 ATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATC 10414 Query 174708 TGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTC 174767 ||||||||||| | || || || ||||| |||||||||||||||| ||| || | || Sbjct 10415 TGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTA 10474 Query 174768 TTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGT 174827 | |||||| | || || || | | || ||||| ||||||||||| || |||| ||| Sbjct 10475 TGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGT 10534 Query 174828 TTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCA 174887 ||||| ||| | |||||||| |||||| |||||||| || || |||||||| |||| Sbjct 10535 TTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCT 10594 Query 174888 GTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATC 174947 |||||| | || || || ||||||| ||||| ||||| || | ||||| | ||||| Sbjct 10595 GTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATT 10654 Query 174948 TCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCC 175007 |||||||| ||||||| |||| | || ||||| || || || |||||| | |||||||| Sbjct 10655 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 10714 Query 175008 TTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGT 175067 ||||||||| | || || || ||||| |||||||||||| | ||||| || ||||| ||| Sbjct 10715 TTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGT 10774 Query 175068 TCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGT 175127 ||||| || || || || || |||||||||| ||||| | ||||| ||| || Sbjct 10775 TCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGA 10834 Query 175128 TACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGT 175187 ||||||||||| |||||||||||||| || |||||||| || || || || |||||||| Sbjct 10835 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGA 10894 Query 175188 CGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCC 175247 ||| | |||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct 10895 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCA 10954 Query 175248 GCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAAC 175307 |||||||| |||| ||||||||||| || | ||| |||| || ||||| |||||| Sbjct 10955 ATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAAC 11014 Query 175308 CTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACC 175367 || || || |||||||||||||||||||| | || | | || | ||| | ||||| Sbjct 11015 CTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACA 11074 Query 175368 TGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCA 175427 ||||| ||| | | ||| | ||| || || |||||||||||||| ||| | || || Sbjct 11075 TGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCT 11134 Query 175428 CACAACTTCCCACTAGA 175444 |||||||||||||| || Sbjct 11135 CACAACTTCCCACTTGA 11151 Score = 780 bits (864), Expect = 0.0 Identities = 759/977 (78%), Gaps = 0/977 (0%) Strand=Plus/Minus Query 174468 TTTTGTTCCTGGGTCACATCAACCAACAATCGTCTTTACGTCGGTTGGTTCGGTGTTCTA 174527 |||||||| ||| | || ||||| | || ||||||||| ||||||||||||| || || Sbjct 36968 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 36909 Query 174528 ATGATTCCTACATTGTTAGCCGCAACTGTATGTTTCATTATCGCTTTCGTGGGTGCTCCC 174587 ||||| ||||| || | | |||||| | ||||| | || || | | |||||| Sbjct 36908 ATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCT 36849 Query 174588 CCAGTGGACATCGACGGAATCCGTGAACCAGTAGCTGGTTCACTCATGTATGGAAACAAC 174647 || || || ||||| || |||||||| |||||| |||| ||||| ||||| ||||||||| Sbjct 36848 CCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 36789 Query 174648 ATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGGTCTACACTTCTACCCAATC 174707 |||||||||||||| || | |||| || ||||| ||||| || ||||||||||||||| Sbjct 36788 ATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATC 36729 Query 174708 TGGGAAGCAGCCACACTCGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTAGTTGTC 174767 ||||||||||| | || || || ||||| |||||||||||||||| ||| || | || Sbjct 36728 TGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTA 36669 Query 174768 TTCCACTTCCTTATTGGTATCTACGCCTATATGGGACGTGAGTGGGAACTCTCTTATCGT 174827 | |||||| | || || || | | || ||||| ||||||||||| || |||| ||| Sbjct 36668 TGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGT 36609 Query 174828 TTAGGTATGAGACCTTGGATCTGTGTAGCATACTCTGCACCAGTTGCAGCAGCTTCAGCA 174887 ||||| ||| | |||||||| |||||| |||||||| || || |||||||| |||| Sbjct 36608 TTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCT 36549 Query 174888 GTATTCCTAGTCTATCCTTTCGGTCAAGGTTCATTCTCAGACGCGATGCCCTTGGGTATC 174947 |||||| | || || || ||||||| ||||| ||||| || | ||||| | ||||| Sbjct 36548 GTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATT 36489 Query 174948 TCTGGAACATTCAACTACATGTTGGTCTTCCAAGCAGAACATAACATCTTGATGCACCCC 175007 |||||||| ||||||| |||| | || ||||| || || || |||||| | |||||||| Sbjct 36488 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 36429 Query 175008 TTCCACATGTTGGGAGTCGCAGGTGTCTTCGGTGGTTCATTGTTCTCAGCGATGCATGGT 175067 ||||||||| | || || || ||||| |||||||||||| | ||||| || ||||| ||| Sbjct 36428 TTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGT 36369 Query 175068 TCACTTGTTACCTCTTCACTTGTCCGTGAGACAACTGAAACTGAGTCACAGAACTATGGT 175127 ||||| || || || || || |||||||||| ||||| | ||||| ||| || Sbjct 36368 TCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGA 36309 Query 175128 TACAAGTTCGGCCAAGAAGAAGAGACCTATAACATCGTGGCAGCCCATGGCTACTTCGGT 175187 ||||||||||| |||||||||||||| || |||||||| || || || || |||||||| Sbjct 36308 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGA 36249 Query 175188 CGTTTGATCTTCCAATACGCTTCATTCAACAACTCACGCTCACTCCACTTCTTCTTAGCC 175247 ||| | |||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct 36248 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCA 36189 Query 175248 GCATGGCCAGTTGTGGGTATCTGGTTCACCGCACTTGGTGTTTCCACAATGGCATTCAAC 175307 |||||||| |||| ||||||||||| || | ||| |||| || ||||| |||||| Sbjct 36188 ATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAAC 36129 Query 175308 CTCAATGGTTTCAACTTCAACCAGTCTGTTATCGACGGACAAGGTAGAGTATTGAACACC 175367 || || || |||||||||||||||||||| | || | | || | ||| | ||||| Sbjct 36128 CTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACA 36069 Query 175368 TGGGCGGATGTTCTTAACAGAGCTGGTCTTGGGATGGAAGTAATGCATGAGAGAAATGCA 175427 ||||| ||| | | ||| | ||| || || |||||||||||||| ||| | || || Sbjct 36068 TGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCT 36009 Query 175428 CACAACTTCCCACTAGA 175444 |||||||||||||| || Sbjct 36008 CACAACTTCCCACTTGA 35992 Score = 518 bits (574), Expect = 5e-142 Identities = 729/1018 (72%), Gaps = 4/1018 (0%) Strand=Plus/Plus Query 175845 GGGTGGTATGATATTTTGGAAGACTGGCTTCTCAGAGATAGGTTTATCTTTATTGGCTGG 175904 || |||| ||| | | || ||||||||| | ||| | || | || | || ||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 175905 TCTGGATTACTACTTCTTCCCAC-TGCTTATCTTGCCATTGGCGGCTGGCTTACTGGCAC 175963 || ||| | || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 175964 AACTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAGGGTGCTAA 176023 ||| || || || |||||||| || ||| | || ||| || |||||||| ||| Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 176024 CTTTCTCACAGCGGCTGTCTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 176083 ||| || ||| |||| || || || || || | ||||| ||| || |||||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 176084 TTGGGGTCCTGAATCTCAGGGCGACTTCCAGCGGTGGCTCCAACTTGGAGGGCTTTGGTC 176143 |||||| || ||| | || || || ||| || ||| || ||||| || | ||| | Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 176144 CTTTGTTGCTCTCCACGGTGCCTTCGCTCTGATTGGATTCATGCTTCGTCAGTTTGAACT 176203 || || || || |||||||| |||| | || ||||| ||||| ||||| |||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 176204 GGCAAGACTCATTGGTATCCGTCCCTACAACGCTATTGCATTCAGTGGTCCTATCGCTGT 176263 ||| | | || ||||| |||||||| ||||||||| | ||||||||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 176264 ATTTGTCAGTGTGTTTCTTCTATACCCACTAGGTCAATCTTCCTGGTTCTTTGCCCCCTC 176323 |||||| ||| || ||| | |||||||| || ||||| ||||||||||| || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 176324 CTTTGGTGTGGCAGCAATCTTTAGATTCCTATTGTTTCTT-CAGGGTTTCCACAACTGGA 176382 |||||||| || | ||| || | ||| | | |||||| || || ||||||||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCAT-TCTTTTCTTCCAAGGGTTCCACAACTGGA 2526 Query 176383 CACTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTACTATCTG 176442 |||| ||||| ||||| ||||||||||| |||||| |||| || | |||||| || | || Sbjct 2527 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTG 2586 Query 176443 CAATCCATGGCGTTACTGTTGAAAATACCCTATATGAAGATGGAGAACAGAACAACACCT 176502 | || || || | ||||| || || || || | |||||||| || ||||| | Sbjct 2587 CGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTT 2646 Query 176503 TCACTGCGTTCGATTCCACGCAGGAGGAAGAGACCTATTCGATGGTTACTGCGAACCGCT 176562 || ||| || | | || || | |||||||| || || ||||| || || ||||| | Sbjct 2647 TCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTT 2706 Query 176563 TCTGGTCGCAAATCTTCGGGGTTGCGTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGT 176622 ||||||| || || ||||| || || || ||| |||||||||||||||||||||||| Sbjct 2707 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGC 2766 Query 176623 TGTTTGTCCCTGTCATGGGTCTTTGGGTCTCAAGTATTGGCATCATTGGGCTTGCTCTTA 176682 | || || ||||| | || | ||| | ||| |||| | | || | || |||| Sbjct 2767 TTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTA 2826 Query 176683 ATCTTCGTGCTTATGATTTTGTGAGCCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTTG 176742 | || ||||| || || || || |||||||| | ||||| |||||||||||||||| Sbjct 2827 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTG 2886 Query 176743 AAACTTTCTACACAAAGAACATCCTTCTTAACGAAGGACTAAGAGCATGGATGGCACCTG 176802 |||| |||||||| ||||| || |||||||||||||| | | |||||||||||| || Sbjct 2887 AAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTC 2946 Query 176803 TGGATCAACCACATGAGTCATTTGTATTCCCAGAAGAAGTTCTACCTAGAGGTAACGC 176860 ||||| || ||||| |||||||||| || || || || || | || ||||| Sbjct 2947 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 3004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729929426641720