Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_027132.1
Length=190768
Score E
Sequences producing significant alignments: (Bits) Value
seq19 812 0.0
>seq19
Length=72585
Score = 812 bits (900), Expect = 0.0
Identities = 769/977 (79%), Gaps = 6/977 (1%)
Strand=Plus/Plus
Query 178870 TGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTGATGATTCCT 178929
||| | || || || | || ||| | || | ||||||||||| || | ||||| |||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 178930 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCCGTCGA 178988
|| || ||| | |||||| || || |||||||| || || | || || ||||| || ||
Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 178989 TATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTC 179048
||| || || |||||||| || || |||| ||||| ||||| |||||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 179049 TGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCATCTGGGAAGC 179108
||||||||| |||| | || ||||| || || || ||||||||||| |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 179109 AGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTT 179168
||| || || ||||||||||| || ||||||||||||| ||| || | || | |||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 179169 CCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTAT 179228
| | ||||| || | | | || ||||| ||||||||||| ||||||| |||| |||| ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 179229 GCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 179288
|||||| ||||| ||| || |||||||| || || || || || | || |||||| |
Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602
Query 179289 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTAC 179348
||| || || ||||||| |||||||||||||||| |||||||||||||| ||||| ||
Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662
Query 179349 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 179408
||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| ||
Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722
Query 179409 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGT 179468
||| ||||||||||| ||||||||||| || ||||||||||| |||||||| |||||
Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782
Query 179469 TACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTT 179528
||||| || || | ||||| || ||||||| ||||| ||| || || |||||
Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842
Query 179529 CGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGAT 179588
|||||||||||||||||| || |||||||| || ||||| || |||||||| ||| | ||
Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902
Query 179589 CTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCC 179648
||||||||| || || || ||||||||||| || | ||||||||||| || |||||
Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962
Query 179649 GGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGG 179708
|| | || ||||||||||| ||| | || | ||||| ||||| |||||||| |||||
Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022
Query 179709 TTTCAACTTCAACCAGTCCATCCTTGACGGTCAA--GGACGTGTCCTTAACACATGGGCG 179766
||||||||||||||||| | | || |||| |||||||| |||||||||||||
Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGA--TTCAAACGGACGTGTAATTAACACATGGGCT 11080
Query 179767 GACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 179826
|| | | |||||||| | ||||||||||| ||||| ||||||||||| ||||||
Sbjct 11081 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 11140
Query 179827 TTCCCACTCGACCTTGC 179843
|||||||| ||||||||
Sbjct 11141 TTCCCACTTGACCTTGC 11157
Score = 812 bits (900), Expect = 0.0
Identities = 769/977 (79%), Gaps = 6/977 (1%)
Strand=Plus/Minus
Query 178870 TGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTGATGATTCCT 178929
||| | || || || | || ||| | || | ||||||||||| || | ||||| |||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 178930 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCCGTCGA 178988
|| || ||| | |||||| || || |||||||| || || | || || ||||| || ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 178989 TATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTC 179048
||| || || |||||||| || || |||| ||||| ||||| |||||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 179049 TGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCATCTGGGAAGC 179108
||||||||| |||| | || ||||| || || || ||||||||||| |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 179109 AGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTT 179168
||| || || ||||||||||| || ||||||||||||| ||| || | || | |||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 179169 CCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTAT 179228
| | ||||| || | | | || ||||| ||||||||||| ||||||| |||| |||| ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 179229 GCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 179288
|||||| ||||| ||| || |||||||| || || || || || | || |||||| |
Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541
Query 179289 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTAC 179348
||| || || ||||||| |||||||||||||||| |||||||||||||| ||||| ||
Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481
Query 179349 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 179408
||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| ||
Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421
Query 179409 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGT 179468
||| ||||||||||| ||||||||||| || ||||||||||| |||||||| |||||
Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361
Query 179469 TACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTT 179528
||||| || || | ||||| || ||||||| ||||| ||| || || |||||
Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301
Query 179529 CGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGAT 179588
|||||||||||||||||| || |||||||| || ||||| || |||||||| ||| | ||
Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241
Query 179589 CTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCC 179648
||||||||| || || || ||||||||||| || | ||||||||||| || |||||
Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181
Query 179649 GGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGG 179708
|| | || ||||||||||| ||| | || | ||||| ||||| |||||||| |||||
Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121
Query 179709 TTTCAACTTCAACCAGTCCATCCTTGACGGTCAA--GGACGTGTCCTTAACACATGGGCG 179766
||||||||||||||||| | | || |||| |||||||| |||||||||||||
Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGA--TTCAAACGGACGTGTAATTAACACATGGGCT 36063
Query 179767 GACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 179826
|| | | |||||||| | ||||||||||| ||||| ||||||||||| ||||||
Sbjct 36062 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 36003
Query 179827 TTCCCACTCGACCTTGC 179843
|||||||| ||||||||
Sbjct 36002 TTCCCACTTGACCTTGC 35986
Score = 621 bits (688), Expect = 4e-173
Identities = 759/1030 (74%), Gaps = 4/1030 (0%)
Strand=Plus/Plus
Query 180015 GGGTGGTTCGATGTCCTGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGG 180074
|| ||||| || | | |||||||||||||| || || || || ||||| || || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 180075 TCTGGACTACTACTTCTTCCCA-CTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCAC 180133
|| ||| | || || |||||| ||| || |||| |||| || ||| ||||||| ||
Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 180134 AGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAA 180193
| | || || || |||||||| |||||| | || ||| || ||||| || |||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 180194 CTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACT 180253
||| ||||| | || || || || || || || ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 180254 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAA 180313
|||||| || || | || || | ||| ||| ||||| || ||||| ||| | ||||
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 180314 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACT 180373
||||| || || |||||||| |||| |||| ||||||||||| || || |||||| |
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 180374 GGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGT 180433
|||||| | || ||||| ||||| || ||||||||||| | |||||||||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 180434 ATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTC 180493
|||||| ||||| || || |||||||| || || || | ||||||||||| || ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 180494 TTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTT-CAGGGTTTCCACAACTGGA 180552
||||| ||||| | ||| || | ||| | || |||||| || || |||||||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCT-TTTCTTCCAAGGGTTCCACAACTGGA 2526
Query 180553 CCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAG 180612
| || ||||| ||||| ||||||||||| |||||| |||| || | |||| | || | |
Sbjct 2527 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTG 2586
Query 180613 CAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCT 180672
| || || || | |||||| ||||||||||| | |||||||| || ||||||| |
Sbjct 2587 CGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTT 2646
Query 180673 TTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCT 180732
| |||||| | |||| |||| || || |||||||| ||||| || |||||||| |
Sbjct 2647 TCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTT 2706
Query 180733 TCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGT 180792
||||||| ||||| |||||| | || || ||||||||||| |||||||| || || |||
Sbjct 2707 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGC 2766
Query 180793 TGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCA 180852
| || || ||||| | || |||||| || | |||| || | || | || || |
Sbjct 2767 TTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTA 2826
Query 180853 ACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCG 180912
|||| ||||| ||||| ||||| ||||||||| | ||||| |||||||||||||| |
Sbjct 2827 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTG 2886
Query 180913 AGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTG 180972
| || |||||||| ||||| || || | || ||||| | ||||||||| ||||| ||
Sbjct 2887 AAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTC 2946
Query 180973 CCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGCAT 181032
||||| || || |||||| | | |||||||| || || || ||| | || |||||
Sbjct 2947 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 3006
Query 181033 TGTGATTCAA 181042
| | ||||||
Sbjct 3007 TTTAATTCAA 3016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610329455046720
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