Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq19 812 0.0 >seq19 Length=72585 Score = 812 bits (900), Expect = 0.0 Identities = 769/977 (79%), Gaps = 6/977 (1%) Strand=Plus/Plus Query 178870 TGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTGATGATTCCT 178929 ||| | || || || | || ||| | || | ||||||||||| || | ||||| ||| Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 178930 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCCGTCGA 178988 || || ||| | |||||| || || |||||||| || || | || || ||||| || || Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 178989 TATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTC 179048 ||| || || |||||||| || || |||| ||||| ||||| ||||||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 179049 TGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCATCTGGGAAGC 179108 ||||||||| |||| | || ||||| || || || ||||||||||| ||||||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 179109 AGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTT 179168 ||| || || ||||||||||| || ||||||||||||| ||| || | || | ||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 179169 CCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTAT 179228 | | ||||| || | | | || ||||| ||||||||||| ||||||| |||| |||| || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 179229 GCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 179288 |||||| ||||| ||| || |||||||| || || || || || | || |||||| | Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602 Query 179289 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTAC 179348 ||| || || ||||||| |||||||||||||||| |||||||||||||| ||||| || Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662 Query 179349 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 179408 ||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| || Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722 Query 179409 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGT 179468 ||| ||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782 Query 179469 TACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTT 179528 ||||| || || | ||||| || ||||||| ||||| ||| || || ||||| Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842 Query 179529 CGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGAT 179588 |||||||||||||||||| || |||||||| || ||||| || |||||||| ||| | || Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902 Query 179589 CTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCC 179648 ||||||||| || || || ||||||||||| || | ||||||||||| || ||||| Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962 Query 179649 GGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGG 179708 || | || ||||||||||| ||| | || | ||||| ||||| |||||||| ||||| Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022 Query 179709 TTTCAACTTCAACCAGTCCATCCTTGACGGTCAA--GGACGTGTCCTTAACACATGGGCG 179766 ||||||||||||||||| | | || |||| |||||||| ||||||||||||| Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGA--TTCAAACGGACGTGTAATTAACACATGGGCT 11080 Query 179767 GACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 179826 || | | |||||||| | ||||||||||| ||||| ||||||||||| |||||| Sbjct 11081 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 11140 Query 179827 TTCCCACTCGACCTTGC 179843 |||||||| |||||||| Sbjct 11141 TTCCCACTTGACCTTGC 11157 Score = 812 bits (900), Expect = 0.0 Identities = 769/977 (79%), Gaps = 6/977 (1%) Strand=Plus/Minus Query 178870 TGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTGATGATTCCT 178929 ||| | || || || | || ||| | || | ||||||||||| || | ||||| ||| Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 178930 ACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACCTCCCGTCGA 178988 || || ||| | |||||| || || |||||||| || || | || || ||||| || || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 178989 TATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCTC 179048 ||| || || |||||||| || || |||| ||||| ||||| ||||||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 179049 TGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCATCTGGGAAGC 179108 ||||||||| |||| | || ||||| || || || ||||||||||| ||||||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 179109 AGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACTT 179168 ||| || || ||||||||||| || ||||||||||||| ||| || | || | ||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 179169 CCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCGTCTAGGTAT 179228 | | ||||| || | | | || ||||| ||||||||||| ||||||| |||| |||| || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 179229 GCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGCAGTATTCCT 179288 |||||| ||||| ||| || |||||||| || || || || || | || |||||| | Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541 Query 179289 CGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTATCTCTGGTAC 179348 ||| || || ||||||| |||||||||||||||| |||||||||||||| ||||| || Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481 Query 179349 TTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCCGTTCCATAT 179408 ||| |||| |||| | |||||||| || || |||||||||||||||||||| ||||| || Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421 Query 179409 GCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTCTCGT 179468 ||| ||||||||||| ||||||||||| || ||||||||||| |||||||| ||||| Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361 Query 179469 TACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGGTTATAAGTT 179528 ||||| || || | ||||| || ||||||| ||||| ||| || || ||||| Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301 Query 179529 CGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGAT 179588 |||||||||||||||||| || |||||||| || ||||| || |||||||| ||| | || Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241 Query 179589 CTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGCTGCGTGGCC 179648 ||||||||| || || || ||||||||||| || | ||||||||||| || ||||| Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181 Query 179649 GGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAACCTCAACGG 179708 || | || ||||||||||| ||| | || | ||||| ||||| |||||||| ||||| Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121 Query 179709 TTTCAACTTCAACCAGTCCATCCTTGACGGTCAA--GGACGTGTCCTTAACACATGGGCG 179766 ||||||||||||||||| | | || |||| |||||||| ||||||||||||| Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGA--TTCAAACGGACGTGTAATTAACACATGGGCT 36063 Query 179767 GACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 179826 || | | |||||||| | ||||||||||| ||||| ||||||||||| |||||| Sbjct 36062 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 36003 Query 179827 TTCCCACTCGACCTTGC 179843 |||||||| |||||||| Sbjct 36002 TTCCCACTTGACCTTGC 35986 Score = 621 bits (688), Expect = 4e-173 Identities = 759/1030 (74%), Gaps = 4/1030 (0%) Strand=Plus/Plus Query 180015 GGGTGGTTCGATGTCCTGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGG 180074 || ||||| || | | |||||||||||||| || || || || ||||| || || ||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 180075 TCTGGACTACTACTTCTTCCCA-CTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCAC 180133 || ||| | || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 180134 AGCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAA 180193 | | || || || |||||||| |||||| | || ||| || ||||| || ||| Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 180194 CTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACT 180253 ||| ||||| | || || || || || || || ||||| ||| || |||||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 180254 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAA 180313 |||||| || || | || || | ||| ||| ||||| || ||||| ||| | |||| Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 180314 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACT 180373 ||||| || || |||||||| |||| |||| ||||||||||| || || |||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 180374 GGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGT 180433 |||||| | || ||||| ||||| || ||||||||||| | ||||||||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 180434 ATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTC 180493 |||||| ||||| || || |||||||| || || || | ||||||||||| || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 180494 TTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTT-CAGGGTTTCCACAACTGGA 180552 ||||| ||||| | ||| || | ||| | || |||||| || || ||||||||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCT-TTTCTTCCAAGGGTTCCACAACTGGA 2526 Query 180553 CCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAG 180612 | || ||||| ||||| ||||||||||| |||||| |||| || | |||| | || | | Sbjct 2527 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTG 2586 Query 180613 CAATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCT 180672 | || || || | |||||| ||||||||||| | |||||||| || ||||||| | Sbjct 2587 CGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTT 2646 Query 180673 TTAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGTCACTGCAAACCGCT 180732 | |||||| | |||| |||| || || |||||||| ||||| || |||||||| | Sbjct 2647 TCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTT 2706 Query 180733 TCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCATGT 180792 ||||||| ||||| |||||| | || || ||||||||||| |||||||| || || ||| Sbjct 2707 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGC 2766 Query 180793 TGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCA 180852 | || || ||||| | || |||||| || | |||| || | || | || || | Sbjct 2767 TTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTA 2826 Query 180853 ACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAAGATCCTGAGTTCG 180912 |||| ||||| ||||| ||||| ||||||||| | ||||| |||||||||||||| | Sbjct 2827 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTG 2886 Query 180913 AGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCATGGTTGGCACCTG 180972 | || |||||||| ||||| || || | || ||||| | ||||||||| ||||| || Sbjct 2887 AAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTC 2946 Query 180973 CCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCAAGAGGTAACGCAT 181032 ||||| || || |||||| | | |||||||| || || || ||| | || ||||| Sbjct 2947 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 3006 Query 181033 TGTGATTCAA 181042 | | |||||| Sbjct 3007 TTTAATTCAA 3016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610329455046720