Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq1 91.5 5e-13
seq7 84.2 7e-11
>seq1
Length=2053059
Score = 91.5 bits (100), Expect = 5e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 256106 TGGACCGAACTGCGCAACCAGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCG 256165
||||||| || || | ||||| |||||||| | |||||||| | | |||||
Sbjct 2015609 TGGACCGGGCTTCGGACGAAGATCTCCGAGCACGGCGTCCGCAACTCCCTGCTGGTGGCG 2015668
Query 256166 CCCATGCCAACCGCCAGCACCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTG 256225
|||||||| ||||| ||| | || || |||| ||| || || |||| ||
Sbjct 2015669 CCCATGCCCACCGCGTCCACGTCCCAGATTTTGGGCAACAACGAGTGCTTCGAGCCGTAC 2015728
Query 256226 ACTACCAACTTCTTCTCGCGCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTAC 256285
|| ||||| ||| | | |||||||| | ||||||||||||| |||| ||||||||| ||
Sbjct 2015729 ACCTCCAACATCTACGCCCGCCGCGTGCTCTCCGGCGAGTTCACCGTCGTGAACCAGCAC 2015788
>seq7
Length=1394110
Score = 84.2 bits (92), Expect = 7e-11
Identities = 127/177 (72%), Gaps = 3/177 (2%)
Strand=Plus/Plus
Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTG-GTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
|||| ||||||||| || || || || ||| || || || | || || ||| ||
Sbjct 900289 TTCGCCGAGCGACTGGTGGCGTTCGC-GTGCGTGGAGGGCATCTTCTTCTCCGGATCGTT 900347
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| || | ||||||||| | || ||||| || || |||| ||| || ||||| ||||
Sbjct 900348 TTGCG-CAATCTTCTGGCTCAAGAAGCGCGGGCTCATGCGCGGGCTCACCTTCTCCAACG 900406
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCA 443875
| || ||| |||||||||| | || |||||||||||||| || |||||| |||
Sbjct 900407 AGCTCATCTCCAGGGACGAGGGCCTCCACTGCGACTTCGCCTGCCTCCTCTACTCCA 900463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335613339455
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |