Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq6 125 6e-24 >seq6 Length=1431126 Score = 125 bits (138), Expect = 6e-24 Identities = 244/357 (68%), Gaps = 5/357 (1%) Strand=Plus/Plus Query 135404 CACGCCTCTGAT-CGCAGAGACTTTTGTTACACGCGCGAGCAATGGGACCAAGCGTTGAC 135462 ||||| || ||| ||| |||| ||| ||||| ||| | | ||| || || || Sbjct 799348 CACGCTTCCGATGCGC-GAGAGTTTGCGTACACTTTGGAGGAGTTGGAGCATTCGCGAAC 799406 Query 135463 GCATGACCCGTTGTGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGG 135522 ||| ||| | | ||||||||||| || | |||| | || |||| |||||||| Sbjct 799407 GCACGACGAGCTCTGGAACGCGGCGCAGAAGGAGCTGACGCACCTGGGCACCATGCACGG 799466 Query 135523 ATTTATGCGCATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCG---CCTGCAGA 135579 || |||||||||| ||||| || ||||| |||| ||| | | | || | || Sbjct 799467 GTTCCTGCGCATGTACTGGGCCAAGAAGATCCTGGAGTGGACCGGCGAGGGACCGGAGGA 799526 Query 135580 GGCGCTACAACACGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAA 135639 |||||| | || || || | | | || || ||| | || || |||||| | || Sbjct 799527 GGCGCTGCGACGGGCGATTTATCTCAACGACAGGTACCAGCTGGACGGTCGCGATCCGAA 799586 Query 135640 TGGCTACGTAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCG 135699 ||| ||||| || || |||||| | || ||||| || ||||| || || ||||| ||||| Sbjct 799587 TGGTTACGTCGGGTGCATGTGGGCCATCTGCGGGGTTCACGACCAGGGCTGGAAAGAGCG 799646 Query 135700 CAAAGTGTTTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAA 135756 | | ||||| || ||| |||| || |||||||| | || || | |||| ||||| Sbjct 799647 CGACGTGTTCGGAAAGGTTCGGTACATGAACTACGCGGGGTGCAAGCGAAAGTTTAA 799703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918296706880