Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_028663.1
Length=188632
Score E
Sequences producing significant alignments: (Bits) Value
seq19 762 0.0
>seq19
Length=72585
Score = 762 bits (844), Expect = 0.0
Identities = 746/960 (78%), Gaps = 4/960 (0%)
Strand=Plus/Plus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGTT 176206
||||| | |||||||| || || | ||||| || | | || || || | || |
Sbjct 10209 TTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTAT 10268
Query 176207 TTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTAG 176266
| ||||| ||||||||||| || || ||||| |||||||| ||||| || || ||||||
Sbjct 10269 TCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTAT 10328
Query 176267 CAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACG 176326
| ||||| || | || ||||||||||||||||| || || || |||| | || ||||
Sbjct 10329 CTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACG 10388
Query 176327 CAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACA 176386
| |||||||| |||||||||||||||||||||||||| | |||| || ||||| ||||
Sbjct 10389 CTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACA 10448
Query 176387 ATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGG 176446
| || || || ||||| || | |||| |||||| | ||||| || | | |||||||
Sbjct 10449 ACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGG 10508
Query 176447 GACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACT 176506
| || | ||||| ||| || | | |||| |||||||||||||| ||| || ||||
Sbjct 10509 GTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACT 10568
Query 176507 CTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTT 176566
|||| || ||| | ||||| | || || ||| |||| || ||| ||||||| || ||||
Sbjct 10569 CTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTT 10628
Query 176567 TCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAG 176626
|||||||||| ||||||||||| ||||| || || |||||||| ||| | |||||||| |
Sbjct 10629 TCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGG 10688
Query 176627 CAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTG 176686
| ||||||||||| || |||||||||||||| |||||||| || || ||||| || ||||
Sbjct 10689 CTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTG 10748
Query 176687 GATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAA 176746
| || |||||||| ||||||||||| || || ||||| || || | | ||||| |
Sbjct 10749 GTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTA 10808
Query 176747 CCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACA 176806
| || ||||| || |||| || ||||| |||||||||||||||||||| |||||||
Sbjct 10809 CTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACA 10868
Query 176807 TTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACT 176866
| |||||||||||||||||||| || |||||||||||||| || ||||| ||||| ||||
Sbjct 10869 TCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACT 10928
Query 176867 CAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAA 176926
|| | || ||||||||||| ||| | ||||| | | |||||||| || || |
Sbjct 10929 CACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTA 10988
Query 176927 TGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAG 176986
||||| ||| || ||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct 10989 TGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAG 11048
Query 176987 A--CAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGG 177044
| ||| || || ||| ||||||| |||||| | |||||||| ||||| ||
Sbjct 11049 ATTCAA--ACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGG 11106
Query 177045 TATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTGCAGA 177104
||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||
Sbjct 11107 TATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGCATCTGTAGA 11166
Score = 762 bits (844), Expect = 0.0
Identities = 746/960 (78%), Gaps = 4/960 (0%)
Strand=Plus/Minus
Query 176147 TTTACGTTGGTTGGTTTGGTGTGCTCATGATTCCATGTCTGCTCACTGCTGCAGCATGTT 176206
||||| | |||||||| || || | ||||| || | | || || || | || |
Sbjct 36934 TTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTAT 36875
Query 176207 TTATCGTTGCATTTATTGCAGCACCACCTGTCGATATCGACGGTATTCGCGAACCAGTAG 176266
| ||||| ||||||||||| || || ||||| |||||||| ||||| || || ||||||
Sbjct 36874 TCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTAT 36815
Query 176267 CAGGATCTCTACTCTATGGAAACAACATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACG 176326
| ||||| || | || ||||||||||||||||| || || || |||| | || ||||
Sbjct 36814 CTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACG 36755
Query 176327 CAATCGGACTACACTTCTACCCAATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACA 176386
| |||||||| |||||||||||||||||||||||||| | |||| || ||||| ||||
Sbjct 36754 CTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACA 36695
Query 176387 ATGGAGGACCATACCAACTCGTTGTATTCCACTTCCTTATCGGTATCTCAGCTTACATGG 176446
| || || || ||||| || | |||| |||||| | ||||| || | | |||||||
Sbjct 36694 ACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGG 36635
Query 176447 GACGCCAATGGGAACTTAGTTACAGACTAGGCATGCGTCCTTGGATCTGTGTTGCATACT 176506
| || | ||||| ||| || | | |||| |||||||||||||| ||| || ||||
Sbjct 36634 GTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACT 36575
Query 176507 CTGCACCAGTATCTGCAGCGATGGCAGTTTTCCTCGTCTATCCATTCGGTCAAGGATCTT 176566
|||| || ||| | ||||| | || || ||| |||| || ||| ||||||| || ||||
Sbjct 36574 CTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTT 36515
Query 176567 TCTCTGATGGTATGCCTCTTGGCATTTCAGGTACATTCAACTTTATGTTTGTATTCCAAG 176626
|||||||||| ||||||||||| ||||| || || |||||||| ||| | |||||||| |
Sbjct 36514 TCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGG 36455
Query 176627 CAGAGCACAACATTCTAATGCACCCATTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTG 176686
| ||||||||||| || |||||||||||||| |||||||| || || ||||| || ||||
Sbjct 36454 CTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTG 36395
Query 176687 GATCTCTTTTCTCAGCAATGCACGGAAGTCTTGTTACTTCTTCACTTGTTAGAGAGACAA 176746
| || |||||||| ||||||||||| || || ||||| || || | | ||||| |
Sbjct 36394 GTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTA 36335
Query 176747 CCGAAAACGAATCACAAAACTACGGTTACAAATTCGGACAAGAAGAAGAGACATACAACA 176806
| || ||||| || |||| || ||||| |||||||||||||||||||| |||||||
Sbjct 36334 CTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACA 36275
Query 176807 TTGTAGCTGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAATAACT 176866
| |||||||||||||||||||| || |||||||||||||| || ||||| ||||| ||||
Sbjct 36274 TCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACT 36215
Query 176867 CAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCAGTTGTTTGCATCTGGTTTACTGCAA 176926
|| | || ||||||||||| ||| | ||||| | | |||||||| || || |
Sbjct 36214 CACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTA 36155
Query 176927 TGGGTGTTTGCACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCTTAG 176986
||||| ||| || ||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct 36154 TGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAG 36095
Query 176987 A--CAACTCTGGTAAAGTGATTCCTACATGGGGAGATATCCTTAACCGTGCAAACCTTGG 177044
| ||| || || ||| ||||||| |||||| | |||||||| ||||| ||
Sbjct 36094 ATTCAA--ACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGG 36037
Query 177045 TATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGCTGCTGCAGA 177104
||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| |||
Sbjct 36036 TATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGCATCTGTAGA 35977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603494256670080
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