Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5 242 3e-59 >seq5 Length=1518631 Score = 242 bits (268), Expect = 3e-59 Identities = 415/599 (69%), Gaps = 10/599 (2%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || || || | |||| | |||||||| | ||| || || |||||||| ||||| || | Sbjct 815419 ACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTGAAGGGCACACCGAGG 815478 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 |||||||| | ||| | || || | |||||| || | ||| || || |||||||| || Sbjct 815479 CCCATGTCGCACGACCTCTGGTACATCTGGCACGATAACTCACCGTTTGCGACGTAAAAC 815538 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 ||||||| ||||||||||||| || |||||| ||| || |||||||||||| Sbjct 815539 TGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCCGCGGGGTTCCACGCG 815598 Query 6797 CACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGC 6856 | || ||| | ||||| | ||||| ||| | |||||||||| | | ||| Sbjct 815599 GTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCGATCACCTCCGCGAGC 815658 Query 6857 TGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGT 6916 |||||| ||||||| || | |||||| || | | || ||||| || || ||||| Sbjct 815659 TGGTCCACTCCCTGACCGGTATAGTCGGCGTGCATGTCCTTGTACTCGGCGCCGAAGTGG 815718 Query 6917 CTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACC---CC 6973 | ||||||||| ||||| ||||| || | ||| |||||||||| || || || || Sbjct 815719 CGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCC----TGTGACCCAGGCC 815774 Query 6974 --CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG 7031 ||| |||| || | || || |||| | ||||||| || | | || | | Sbjct 815775 GACGC-TGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAATGTCCTTGTCCT 815833 Query 7032 AGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCT 7091 ||| ||||||| | | ||| ||| | |||||||| | |||||||| | |||||| Sbjct 815834 GGAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCTCCGCGACGCCCC 815893 Query 7092 TCCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCGGGCCT 7151 ||||| | ||||| || || || |||||||| || || ||||||| | | || | Sbjct 815894 TCCAGAAGACACGCTTGGTGGTGAGCAGCGGGAAGCTGCGGCGAAGGTCGAAACGCATTT 815953 Query 7152 GTGTGCCGAACACGGAGAGGGTCCCCGTCCCGGTCCGGTCCCCCTTCCGGTAGCCCTCC 7210 | ||| ||| | | || ||||| ||||| ||||| |||||| || ||||||| Sbjct 815954 GGCAGCCAAACTTGCTAATCGTGCCCGTTCCGGTGCGGTCACCCTTCACGTTGCCCTCC 816012 Score = 242 bits (268), Expect = 3e-59 Identities = 415/599 (69%), Gaps = 10/599 (2%) Strand=Plus/Minus Query 34135 GGAGGGCTACCGGAAGGGGGACCGGACCGGGACGGGGACCCTCTCCGTGTTCGGCACACA 34194 ||||||| || |||||| ||||| ||||| ||||| || | | ||| ||| || Sbjct 816012 GGAGGGCAACGTGAAGGGTGACCGCACCGGAACGGGCACGATTAGCAAGTTTGGCTGCCA 815953 Query 34195 GGCCCGATACAACCTTCGGGGCGAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAA 34254 || | | ||||||| || || |||||||| || || || ||||| | ||||| Sbjct 815952 AATGCGTTTCGACCTTCGCCGCAGCTTCCCGCTGCTCACCACCAAGCGTGTCTTCTGGAG 815893 Query 34255 GGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTC 34314 |||||| | |||||||| | |||||||| | ||| ||| | | ||||||| ||| Sbjct 815892 GGGCGTCGCGGAGGAGCTCATCTGGTTCGTCAAGGGCTGCACCAGCGCCAAGGAACTCCA 815833 Query 34315 GTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG--G 34372 | | || | | || ||||||| | |||| || || | || |||| ||| | Sbjct 815832 GGACAAGGACATTCACATTTGGGACGGTAACGGAAGCCGCGAGTACCTCGACA-GCGTCG 815774 Query 34373 G---GGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGA 34429 | || || || |||||||||| ||| | || ||||| ||||| ||||||||| | Sbjct 815773 GCCTGGGTCACA----GGGAGGAGGGTGACCTCGGGCCGGTGTACGGCTTCCAGTGGCGC 815718 Query 34430 CACTTTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAG 34489 ||||| || || ||||| || | | || |||||| | || ||||||| ||||||| Sbjct 815717 CACTTCGGCGCCGAGTACAAGGACATGCACGCCGACTATACCGGTCAGGGAGTGGACCAG 815658 Query 34490 CTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGC 34549 || | | |||||||||| | ||| ||||| | ||||| | ||| || | | Sbjct 815657 CTCGCGGAGGTGATCGACAAGATCAAGAACAACCCCAACGACAGGCGTATCCTGCTCACC 815598 Query 34550 GCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAA 34609 ||||||||||| || ||| |||||| || ||||||||||||| ||||||| Sbjct 815597 GCGTGGAACCCCGCGGCGCTCAAGGAGATGGCCCTGCCCCCGTGCCACATGTTCTGCCAG 815538 Query 34610 TTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGG 34669 || |||||||| || || ||| | || |||||| | || || | ||| | |||||||| Sbjct 815537 TTTTACGTCGCAAACGGTGAGTTATCGTGCCAGATGTACCAGAGGTCGTGCGACATGGGC 815478 Query 34670 TTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 | || ||||| |||||||| || || ||| | |||||||| | |||| | || || || Sbjct 815477 CTCGGTGTGCCCTTCAACATCGCGAGCTACTCCCTGCTCACCTGCATGGTGGCGCAGGT 815419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262293537680