Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq5 277 1e-69 >seq5 Length=1518631 Score = 277 bits (306), Expect = 1e-69 Identities = 446/640 (70%), Gaps = 1/640 (0%) Strand=Plus/Plus Query 27090 GTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTC 27149 ||| ||| | || || || || || |||||||| |||||||||| | | || || || Sbjct 815292 GTTGATCTTGAGCGTCGGGAACGGCCTGGGCTCGTTCTCGAGCTGCTTGTAGAGGGGCTC 815351 Query 27150 CACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAG 27209 ||||| | ||| ||||| | ||| || | ||| ||||| ||||| || | || Sbjct 815352 GACGTGGTTGGAGTACACGTGGGTGTCGCCGCAGCAGTGCACAAAGTCTCCGGGCTTCAG 815411 Query 27210 CCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTAC 27269 ||| || || |||| |||| | ||||| || |||||||| |||||||| ||||| || Sbjct 815412 TCCGCACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTGAAGGGCAC 815471 Query 27270 CCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTAC 27329 ||||| |||||||| | |||||||||||| | ||| ||||| | ||| || | || Sbjct 815472 ACCGAGGCCCATGTCGCACGACCTCTGGTACATCTGGCACGATAACTCACCGTTTGCGAC 815531 Query 27330 GTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTT 27389 ||||||||| || | ||||||||| || || ||||| | | |||||| Sbjct 815532 GTAAAACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCCGCGGGGTT 815591 Query 27390 CCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTT 27449 ||| ||| | | ||| |||||||| | ||||||||| |||| ||| | | | Sbjct 815592 CCACGCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCGATCACCTC 815651 Query 27450 TTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCC 27509 ||||| ||||| ||| || | ||||| | ||||||| ||||||| || || Sbjct 815652 CGCGAGCTGGTCCACTCCCTGACCGGTATAGTCGGCGTGCATGTCCTTGTACTCGGCGCC 815711 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 ||| || | ||| ||||| ||||||||||| || ||||| ||||| |||||||| | | Sbjct 815712 GAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCTGTGACCCAG 815771 Query 27570 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 27629 ||| |||| | | || | | ||||| ||||||| || | | |||| || Sbjct 815772 GCCGACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAATGTCCTTGTC 815831 Query 27630 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 27689 ||| || |||| | | ||| | || |||||||||| | ||||||||| ||||| | Sbjct 815832 CTGGAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCTCCGCGACGCC 815891 Query 27690 CTTCCAAAAGACCCTCTTGGTCGTGAGGAG-GGGAAACTG 27728 | |||| ||||| | |||||| ||||| || ||||| ||| Sbjct 815892 CCTCCAGAAGACACGCTTGGTGGTGAGCAGCGGGAAGCTG 815931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369507114435989