Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_031235.1
Length=194437
Score E
Sequences producing significant alignments: (Bits) Value
seq19 733 0.0
>seq19
Length=72585
Score = 733 bits (812), Expect = 0.0
Identities = 752/978 (77%), Gaps = 6/978 (1%)
Strand=Plus/Plus
Query 183204 ATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTGATGATTCC 183263
||||||||| ||| | ||||| || || | |||||||| || | | ||||| ||
Sbjct 10183 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 10242
Query 183264 AACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCCTCCTGTGG 183322
||| | | ||||||| || | |||||||| || || | |||||||||||||| |
Sbjct 10243 TACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 10301
Query 183323 ACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAACATCATCT 183382
| ||||| || ||||| || || || |||| || || ||||| ||||||||||||||||
Sbjct 10302 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 10361
Query 183383 CTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATCTGGGAAG 183442
||||||| || | ||| | || ||||| || |||||||||||||| || ||||||||||
Sbjct 10362 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 10421
Query 183443 CAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTCTTCCACT 183502
|||| || || ||||||||||| || ||||||||||||||||| || | || | ||||
Sbjct 10422 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 10481
Query 183503 TCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTA 183562
|| |||| || | | | |||||||||||||||||||| | |||| |||| | || |
Sbjct 10482 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 10541
Query 183563 TGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCC 183622
||||||||||||| ||| ||||| || ||||| || || ||||| ||||| |||
Sbjct 10542 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601
Query 183623 TGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCA 183682
| || || || ||||||| |||||||| |||||| ||||| || ||||| ||| |
Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661
Query 183683 CCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACA 183742
| || |||| ||| | || ||||| || |||||||||||||| |||||||| |||||||
Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721
Query 183743 TGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 183802
|||| ||||| |||||||| ||||||||||| || ||| ||||||||||||||| || |
Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781
Query 183803 TTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGT 183862
| ||||| || || | ||||| || |||||| ||||| ||| || |||||||
Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841
Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922
|||| |||||||||||||| |||||||| || ||||| || || ||||| || ||||| |
Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901
Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982
||||||| || ||||| || ||||| || ||||| || ||||||||||| || ||||
Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961
Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042
|||| | || |||||||| || ||| | ||| || |||||||| || ||||| || |
Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021
Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTCCTGAACACCTGGGC 184100
| || |||||||||||||| | | ||| |||| || ||||| | ||||| |||||
Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGC 11079
Query 184101 AGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAA 184160
|| | | ||||||||| || || |||||||| |||||||||||||| ||||||||
Sbjct 11080 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 11139
Query 184161 CTTCCCTCTCGACCTTGC 184178
|||||| || ||||||||
Sbjct 11140 CTTCCCACTTGACCTTGC 11157
Score = 733 bits (812), Expect = 0.0
Identities = 752/978 (77%), Gaps = 6/978 (1%)
Strand=Plus/Minus
Query 183204 ATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTGATGATTCC 183263
||||||||| ||| | ||||| || || | |||||||| || | | ||||| ||
Sbjct 36960 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 36901
Query 183264 AACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCCTCCTGTGG 183322
||| | | ||||||| || | |||||||| || || | |||||||||||||| |
Sbjct 36900 TACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 36842
Query 183323 ACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAACATCATCT 183382
| ||||| || ||||| || || || |||| || || ||||| ||||||||||||||||
Sbjct 36841 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 36782
Query 183383 CTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATCTGGGAAG 183442
||||||| || | ||| | || ||||| || |||||||||||||| || ||||||||||
Sbjct 36781 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 36722
Query 183443 CAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTCTTCCACT 183502
|||| || || ||||||||||| || ||||||||||||||||| || | || | ||||
Sbjct 36721 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 36662
Query 183503 TCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTA 183562
|| |||| || | | | |||||||||||||||||||| | |||| |||| | || |
Sbjct 36661 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 36602
Query 183563 TGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCC 183622
||||||||||||| ||| ||||| || ||||| || || ||||| ||||| |||
Sbjct 36601 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542
Query 183623 TGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCA 183682
| || || || ||||||| |||||||| |||||| ||||| || ||||| ||| |
Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482
Query 183683 CCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACA 183742
| || |||| ||| | || ||||| || |||||||||||||| |||||||| |||||||
Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422
Query 183743 TGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 183802
|||| ||||| |||||||| ||||||||||| || ||| ||||||||||||||| || |
Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362
Query 183803 TTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGT 183862
| ||||| || || | ||||| || |||||| ||||| ||| || |||||||
Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302
Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922
|||| |||||||||||||| |||||||| || ||||| || || ||||| || ||||| |
Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242
Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982
||||||| || ||||| || ||||| || ||||| || ||||||||||| || ||||
Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182
Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042
|||| | || |||||||| || ||| | ||| || |||||||| || ||||| || |
Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122
Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTCCTGAACACCTGGGC 184100
| || |||||||||||||| | | ||| |||| || ||||| | ||||| |||||
Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGC 36064
Query 184101 AGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAA 184160
|| | | ||||||||| || || |||||||| |||||||||||||| ||||||||
Sbjct 36063 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 36004
Query 184161 CTTCCCTCTCGACCTTGC 184178
|||||| || ||||||||
Sbjct 36003 CTTCCCACTTGACCTTGC 35986
Score = 554 bits (614), Expect = 6e-153
Identities = 740/1026 (72%), Gaps = 2/1026 (0%)
Strand=Plus/Plus
Query 185949 AAGAGAGGATGGTTCGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTG 186008
||| | |||||||| || | | || ||||||||||| || || || || || || ||
Sbjct 1983 AAGCGCGGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTA 2042
Query 186009 GGCTGGTCTGGATTACTTCTTTTTCCCA-CTGCTTATATGGCAATTGGTGGCTGGCTTAC 186067
|| ||||| ||| | || || |||||| ||| || | ||| ||||||| ||| ||||
Sbjct 2043 GGTTGGTCAGGAAT-TTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTAC 2101
Query 186068 TGGCACAACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGG 186127
||| ||||| || || || ||||| || ||||| || || ||| |||||||||||
Sbjct 2102 TGGAACAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGG 2161
Query 186128 TGCTAATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCT 186187
||| || || || | ||||| ||||| || || || ||||| ||| || |||||
Sbjct 2162 ATGTAACTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCT 2221
Query 186188 TCTACTTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACT 186247
||| |||||||| || || | ||||| || ||| || |||| || ||||| ||| |
Sbjct 2222 TCTCCTTTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATT 2281
Query 186248 CTGGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTT 186307
|||| || || || || ||||| || || | | || || || ||||| || || ||
Sbjct 2282 ATGGACATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATT 2341
Query 186308 TGAAATCAGTCGTCTCGTAGGTATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTAT 186367
|||||| ||| ||| || ||||| ||||| || ||||| || || | |||||
Sbjct 2342 TGAAATTGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTAT 2401
Query 186368 CGCTGTCTTTGTTAGTGTATTCCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGC 186427
|||||| ||||| ||||||||| || ||||| |||||||| || ||||||||| ||
Sbjct 2402 CGCTGTATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGC 2461
Query 186428 TCCCTCCTTTGGAGTCGCAGCAATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAA 186487
|| || ||||| || || | ||| || | ||| | | ||| ||||||| ||||||||
Sbjct 2462 ACCTTCATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAA 2521
Query 186488 CTGGACGTTGAATCCATTCCACATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCT 186547
|||||| | || ||||||||||||||||| ||||| ||| | ||||| | || || ||
Sbjct 2522 CTGGACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCT 2581
Query 186548 GTCAGCAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAA 186607
| || || || || | |||||||| || || |||| |||||||| || ||||
Sbjct 2582 TTGTGCGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAA 2641
Query 186608 CACATTCAAAGCATTCGATACGACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAA 186667
||| ||| ||||| | | || |||| ||||| || || || ||||| || || ||
Sbjct 2642 CACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAA 2701
Query 186668 CAGATTCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTT 186727
| | |||||||||||||| ||||| | || || || |||||||||||||| |||||
Sbjct 2702 CCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTT 2761
Query 186728 CATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGC 186787
||||| || || ||||| | || | |||| || | |||| || | || | ||
Sbjct 2762 TATGCTTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGC 2821
Query 186788 TCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGA 186847
|||||||| ||||| || ||||| ||| || ||| | | ||||| || ||||||||
Sbjct 2822 ACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGA 2881
Query 186848 GTTCGAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGC 186907
||| || || ||||| || |||||||| || | || |||||| | ||||| ||||||||
Sbjct 2882 GTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGC 2941
Query 186908 ACCAGTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAA 186967
| | ||||| || ||||||||| ||||||| ||||| || || | ||| | || ||
Sbjct 2942 AGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAA 3001
Query 186968 CGCTCT 186973
||||||
Sbjct 3002 CGCTCT 3007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622070252258280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |