Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq19 733 0.0 >seq19 Length=72585 Score = 733 bits (812), Expect = 0.0 Identities = 752/978 (77%), Gaps = 6/978 (1%) Strand=Plus/Plus Query 183204 ATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTGATGATTCC 183263 ||||||||| ||| | ||||| || || | |||||||| || | | ||||| || Sbjct 10183 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 10242 Query 183264 AACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCCTCCTGTGG 183322 ||| | | ||||||| || | |||||||| || || | |||||||||||||| | Sbjct 10243 TACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 10301 Query 183323 ACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAACATCATCT 183382 | ||||| || ||||| || || || |||| || || ||||| |||||||||||||||| Sbjct 10302 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 10361 Query 183383 CTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATCTGGGAAG 183442 ||||||| || | ||| | || ||||| || |||||||||||||| || |||||||||| Sbjct 10362 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 10421 Query 183443 CAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTCTTCCACT 183502 |||| || || ||||||||||| || ||||||||||||||||| || | || | |||| Sbjct 10422 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 10481 Query 183503 TCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTA 183562 || |||| || | | | |||||||||||||||||||| | |||| |||| | || | Sbjct 10482 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 10541 Query 183563 TGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCC 183622 ||||||||||||| ||| ||||| || ||||| || || ||||| ||||| ||| Sbjct 10542 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601 Query 183623 TGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCA 183682 | || || || ||||||| |||||||| |||||| ||||| || ||||| ||| | Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661 Query 183683 CCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACA 183742 | || |||| ||| | || ||||| || |||||||||||||| |||||||| ||||||| Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721 Query 183743 TGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 183802 |||| ||||| |||||||| ||||||||||| || ||| ||||||||||||||| || | Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781 Query 183803 TTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGT 183862 | ||||| || || | ||||| || |||||| ||||| ||| || ||||||| Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841 Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922 |||| |||||||||||||| |||||||| || ||||| || || ||||| || ||||| | Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901 Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982 ||||||| || ||||| || ||||| || ||||| || ||||||||||| || |||| Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961 Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042 |||| | || |||||||| || ||| | ||| || |||||||| || ||||| || | Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021 Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTCCTGAACACCTGGGC 184100 | || |||||||||||||| | | ||| |||| || ||||| | ||||| ||||| Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGC 11079 Query 184101 AGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAA 184160 || | | ||||||||| || || |||||||| |||||||||||||| |||||||| Sbjct 11080 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 11139 Query 184161 CTTCCCTCTCGACCTTGC 184178 |||||| || |||||||| Sbjct 11140 CTTCCCACTTGACCTTGC 11157 Score = 733 bits (812), Expect = 0.0 Identities = 752/978 (77%), Gaps = 6/978 (1%) Strand=Plus/Minus Query 183204 ATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTGATGATTCC 183263 ||||||||| ||| | ||||| || || | |||||||| || | | ||||| || Sbjct 36960 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 36901 Query 183264 AACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCCTCCTGTGG 183322 ||| | | ||||||| || | |||||||| || || | |||||||||||||| | Sbjct 36900 TACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 36842 Query 183323 ACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAACATCATCT 183382 | ||||| || ||||| || || || |||| || || ||||| |||||||||||||||| Sbjct 36841 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 36782 Query 183383 CTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCATCTGGGAAG 183442 ||||||| || | ||| | || ||||| || |||||||||||||| || |||||||||| Sbjct 36781 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 36722 Query 183443 CAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGTCTTCCACT 183502 |||| || || ||||||||||| || ||||||||||||||||| || | || | |||| Sbjct 36721 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 36662 Query 183503 TCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCGTCTCGGTA 183562 || |||| || | | | |||||||||||||||||||| | |||| |||| | || | Sbjct 36661 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 36602 Query 183563 TGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGCTGTCTTCC 183622 ||||||||||||| ||| ||||| || ||||| || || ||||| ||||| ||| Sbjct 36601 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542 Query 183623 TGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTATCAGTGGCA 183682 | || || || ||||||| |||||||| |||||| ||||| || ||||| ||| | Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482 Query 183683 CCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACA 183742 | || |||| ||| | || ||||| || |||||||||||||| |||||||| ||||||| Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422 Query 183743 TGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 183802 |||| ||||| |||||||| ||||||||||| || ||| ||||||||||||||| || | Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362 Query 183803 TTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGGTTACAAGT 183862 | ||||| || || | ||||| || |||||| ||||| ||| || ||||||| Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302 Query 183863 TCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGGTCGTCTGA 183922 |||| |||||||||||||| |||||||| || ||||| || || ||||| || ||||| | Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242 Query 183923 TCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGCTGCTTGGC 183982 ||||||| || ||||| || ||||| || ||||| || ||||||||||| || |||| Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182 Query 183983 CAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAACCTGAATG 184042 |||| | || |||||||| || ||| | ||| || |||||||| || ||||| || | Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122 Query 184043 GTTTTAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTCCTGAACACCTGGGC 184100 | || |||||||||||||| | | ||| |||| || ||||| | ||||| ||||| Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGC 36064 Query 184101 AGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCTCACAA 184160 || | | ||||||||| || || |||||||| |||||||||||||| |||||||| Sbjct 36063 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 36004 Query 184161 CTTCCCTCTCGACCTTGC 184178 |||||| || |||||||| Sbjct 36003 CTTCCCACTTGACCTTGC 35986 Score = 554 bits (614), Expect = 6e-153 Identities = 740/1026 (72%), Gaps = 2/1026 (0%) Strand=Plus/Plus Query 185949 AAGAGAGGATGGTTCGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTG 186008 ||| | |||||||| || | | || ||||||||||| || || || || || || || Sbjct 1983 AAGCGCGGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTA 2042 Query 186009 GGCTGGTCTGGATTACTTCTTTTTCCCA-CTGCTTATATGGCAATTGGTGGCTGGCTTAC 186067 || ||||| ||| | || || |||||| ||| || | ||| ||||||| ||| |||| Sbjct 2043 GGTTGGTCAGGAAT-TTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTAC 2101 Query 186068 TGGCACAACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGG 186127 ||| ||||| || || || ||||| || ||||| || || ||| ||||||||||| Sbjct 2102 TGGAACAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGG 2161 Query 186128 TGCTAATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCT 186187 ||| || || || | ||||| ||||| || || || ||||| ||| || ||||| Sbjct 2162 ATGTAACTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCT 2221 Query 186188 TCTACTTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACT 186247 ||| |||||||| || || | ||||| || ||| || |||| || ||||| ||| | Sbjct 2222 TCTCCTTTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATT 2281 Query 186248 CTGGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTT 186307 |||| || || || || ||||| || || | | || || || ||||| || || || Sbjct 2282 ATGGACATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATT 2341 Query 186308 TGAAATCAGTCGTCTCGTAGGTATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTAT 186367 |||||| ||| ||| || ||||| ||||| || ||||| || || | ||||| Sbjct 2342 TGAAATTGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTAT 2401 Query 186368 CGCTGTCTTTGTTAGTGTATTCCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGC 186427 |||||| ||||| ||||||||| || ||||| |||||||| || ||||||||| || Sbjct 2402 CGCTGTATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGC 2461 Query 186428 TCCCTCCTTTGGAGTCGCAGCAATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAA 186487 || || ||||| || || | ||| || | ||| | | ||| ||||||| |||||||| Sbjct 2462 ACCTTCATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAA 2521 Query 186488 CTGGACGTTGAATCCATTCCACATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCT 186547 |||||| | || ||||||||||||||||| ||||| ||| | ||||| | || || || Sbjct 2522 CTGGACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCT 2581 Query 186548 GTCAGCAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAA 186607 | || || || || | |||||||| || || |||| |||||||| || |||| Sbjct 2582 TTGTGCGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAA 2641 Query 186608 CACATTCAAAGCATTCGATACGACGCAAGAAGAAGAAACCTATTCGATGGTCACTGCGAA 186667 ||| ||| ||||| | | || |||| ||||| || || || ||||| || || || Sbjct 2642 CACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAA 2701 Query 186668 CAGATTCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTTCATTTCTT 186727 | | |||||||||||||| ||||| | || || || |||||||||||||| ||||| Sbjct 2702 CCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTT 2761 Query 186728 CATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTATTGGTCTTGC 186787 ||||| || || ||||| | || | |||| || | |||| || | || | || Sbjct 2762 TATGCTTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGC 2821 Query 186788 TCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAGGATCCTGA 186847 |||||||| ||||| || ||||| ||| || ||| | | ||||| || |||||||| Sbjct 2822 ACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGA 2881 Query 186848 GTTCGAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCCTGGATGGC 186907 ||| || || ||||| || |||||||| || | || |||||| | ||||| |||||||| Sbjct 2882 GTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGC 2941 Query 186908 ACCAGTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCAAGAGGCAA 186967 | | ||||| || ||||||||| ||||||| ||||| || || | ||| | || || Sbjct 2942 AGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAA 3001 Query 186968 CGCTCT 186973 |||||| Sbjct 3002 CGCTCT 3007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622070252258280