Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_031242.1 Length=174307 Score E Sequences producing significant alignments: (Bits) Value seq19 832 0.0 >seq19 Length=72585 Score = 832 bits (922), Expect = 0.0 Identities = 782/993 (79%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 163919 TGGGAACAATTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTC 163978 |||| || || ||| ||| | |||||||| || || ||| | || ||||||||||| Sbjct 10166 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 10225 Query 163979 GGCGTCCTGATGATTCCCTGC-CTGCTGGCAGCGACTACATGTTTCATCATCGCCTTCAT 164037 || || | |||| ||||| | | || |||| ||| || |||||| | || || || Sbjct 10226 GGAGTATTAATGA-TCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTAT 10284 Query 164038 CGGTGCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTA 164097 | |||||||||||| || |||||||| ||||| || || || |||| || || ||||| Sbjct 10285 TGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTA 10344 Query 164098 TGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTT 164157 |||||||||||||||||||||||||| |||||| | |||||||||||||| || ||||| Sbjct 10345 CGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTT 10404 Query 164158 CTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCA 164217 |||||| |||||||||||||| ||| || || ||||| |||||||||||||||| ||| Sbjct 10405 CTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCA 10464 Query 164218 ACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACT 164277 || | || | |||||| | || || || | | | |||||||||||||||||||| || Sbjct 10465 GCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCT 10524 Query 164278 TTCTTACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGC 164337 ||||| |||| | || ||||||||||||||| ||||| |||||||||||||| || || Sbjct 10525 TTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGC 10584 Query 164338 AGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCC 164397 ||| | || || ||| | || || || ||||||| |||||||||||||||| |||||| Sbjct 10585 AGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCC 10644 Query 164398 TCTGGGCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCT 164457 ||| || || |||||||| ||||||| |||| | || ||||||||||||||||||||||| Sbjct 10645 TCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCT 10704 Query 164458 CATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGC 164517 |||||||| ||||| ||||| || || || ||||| || || ||||| || ||| ||| Sbjct 10705 TATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGC 10764 Query 164518 AATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCA 164577 |||||||||||| || || ||||| || || | |||||||| || || || ||||| Sbjct 10765 AATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGC 10824 Query 164578 GAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGG 164637 ||| || |||||||| || || |||||||| || ||||||||||| || || ||||| Sbjct 10825 AAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGG 10884 Query 164638 TTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTT 164697 |||||| || ||||| || |||||||||||||| ||||||||||| ||||| || ||||| Sbjct 10885 TTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTT 10944 Query 164698 CTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCAT 164757 |||||||||| ||||| || | || |||||||| || ||| |||| || || || Sbjct 10945 CTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTAT 11004 Query 164758 GGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGT 164817 ||| |||||||| ||||| ||||||||||||||||| | | ||| | || ||||| Sbjct 11005 GGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGT 11064 Query 164818 GCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGA 164877 | ||||| ||||| || | | ||||||||| || || |||||||| |||||||| Sbjct 11065 AATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGA 11124 Query 164878 GCGTAATGCTCACAACTTCCCTCTCGACCTTGC 164910 |||||| |||||||||||||| || |||||||| Sbjct 11125 GCGTAACGCTCACAACTTCCCACTTGACCTTGC 11157 Score = 832 bits (922), Expect = 0.0 Identities = 782/993 (79%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 163919 TGGGAACAATTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTC 163978 |||| || || ||| ||| | |||||||| || || ||| | || ||||||||||| Sbjct 36977 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 36918 Query 163979 GGCGTCCTGATGATTCCCTGCCTG-CTGGCAGCGACTACATGTTTCATCATCGCCTTCAT 164037 || || | ||||| |||| | | || |||| ||| || |||||| | || || || Sbjct 36917 GGAGTATTAATGAT-CCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTAT 36859 Query 164038 CGGTGCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTA 164097 | |||||||||||| || |||||||| ||||| || || || |||| || || ||||| Sbjct 36858 TGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTA 36799 Query 164098 TGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTT 164157 |||||||||||||||||||||||||| |||||| | |||||||||||||| || ||||| Sbjct 36798 CGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTT 36739 Query 164158 CTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCA 164217 |||||| |||||||||||||| ||| || || ||||| |||||||||||||||| ||| Sbjct 36738 CTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCA 36679 Query 164218 ACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACT 164277 || | || | |||||| | || || || | | | |||||||||||||||||||| || Sbjct 36678 GCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCT 36619 Query 164278 TTCTTACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGC 164337 ||||| |||| | || ||||||||||||||| ||||| |||||||||||||| || || Sbjct 36618 TTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGC 36559 Query 164338 AGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCC 164397 ||| | || || ||| | || || || ||||||| |||||||||||||||| |||||| Sbjct 36558 AGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCC 36499 Query 164398 TCTGGGCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCT 164457 ||| || || |||||||| ||||||| |||| | || ||||||||||||||||||||||| Sbjct 36498 TCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCT 36439 Query 164458 CATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGC 164517 |||||||| ||||| ||||| || || || ||||| || || ||||| || ||| ||| Sbjct 36438 TATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGC 36379 Query 164518 AATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCA 164577 |||||||||||| || || ||||| || || | |||||||| || || || ||||| Sbjct 36378 AATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGC 36319 Query 164578 GAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGG 164637 ||| || |||||||| || || |||||||| || ||||||||||| || || ||||| Sbjct 36318 AAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGG 36259 Query 164638 TTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTT 164697 |||||| || ||||| || |||||||||||||| ||||||||||| ||||| || ||||| Sbjct 36258 TTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTT 36199 Query 164698 CTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCAT 164757 |||||||||| ||||| || | || |||||||| || ||| |||| || || || Sbjct 36198 CTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTAT 36139 Query 164758 GGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGT 164817 ||| |||||||| ||||| ||||||||||||||||| | | ||| | || ||||| Sbjct 36138 GGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGT 36079 Query 164818 GCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGA 164877 | ||||| ||||| || | | ||||||||| || || |||||||| |||||||| Sbjct 36078 AATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGA 36019 Query 164878 GCGTAATGCTCACAACTTCCCTCTCGACCTTGC 164910 |||||| |||||||||||||| || |||||||| Sbjct 36018 GCGTAACGCTCACAACTTCCCACTTGACCTTGC 35986 Score = 590 bits (654), Expect = 7e-164 Identities = 747/1024 (73%), Gaps = 2/1024 (0%) Strand=Plus/Plus Query 165147 GGTTGGTTCGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGG 165206 || ||||| || | | |||||||||||||| | || |||||||| || || || ||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 165207 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGAC 165265 || ||| || || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 165266 TACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAA 165325 || ||||| || ||||| || ||||| | || ||||| || |||||||| || Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 165326 CTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCT 165385 ||| ||||| ||||||| || || ||| | || ||||| ||| || ||||| || || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 165386 ATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGAC 165445 ||||| || || | ||||| || |||| || ||||| || ||||| ||| | ||||| Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 165446 TTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACT 165505 || || || || ||||| || || | | | || || || ||||| || || |||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 165506 GGCACGACTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGT 165565 ||||| | |||||||| ||||| || ||||| ||||| | ||||| ||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 165566 ATTCGTTAGTGTTTTTCTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTC 165625 ||| || ||| || ||||| || || || |||||||| |||||||| ||||| || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 165626 GTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGAC 165685 || || || || | ||| ||||| ||| | || ||| ||||||||||||| |||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 165686 GCTGAATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGC 165745 || || || || ||||||||||| ||||| ||| | | || | |||| | |||| ||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 165746 CATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTT 165805 ||||| || | || |||||||| || | | ||||||||||| |||||||||| Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 165806 CAAAGCATTTGATAGTACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTT 165865 | |||||| | ||||| | || || ||||| || ||||| || || |||||||| Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 165866 CTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCT 165925 |||||| |||||||| ||| | |||||| || |||||||||||||||||||||||||| Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 165926 CTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAA 165985 || || ||||| | || | |||| | ||||| | | || | ||||| || Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 165986 TCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGA 166045 || ||||| || || || || || || ||||| | || ||||| ||||| |||||||| Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 166046 AACGTTCTATACGAAAAACATCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGT 166105 ||| ||||| || || || || || ||||| ||||| | ||||| ||| |||| || Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947 Query 166106 AGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACT 166165 ||| || |||||||| ||| |||| |||||||| || || | ||| | || ||||| || Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Query 166166 TTAA 166169 |||| Sbjct 3008 TTAA 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557654267557080