Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_031242.1
Length=174307
Score E
Sequences producing significant alignments: (Bits) Value
seq19 832 0.0
>seq19
Length=72585
Score = 832 bits (922), Expect = 0.0
Identities = 782/993 (79%), Gaps = 2/993 (0%)
Strand=Plus/Plus
Query 163919 TGGGAACAATTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTC 163978
|||| || || ||| ||| | |||||||| || || ||| | || |||||||||||
Sbjct 10166 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 10225
Query 163979 GGCGTCCTGATGATTCCCTGC-CTGCTGGCAGCGACTACATGTTTCATCATCGCCTTCAT 164037
|| || | |||| ||||| | | || |||| ||| || |||||| | || || ||
Sbjct 10226 GGAGTATTAATGA-TCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTAT 10284
Query 164038 CGGTGCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTA 164097
| |||||||||||| || |||||||| ||||| || || || |||| || || |||||
Sbjct 10285 TGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTA 10344
Query 164098 TGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTT 164157
|||||||||||||||||||||||||| |||||| | |||||||||||||| || |||||
Sbjct 10345 CGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTT 10404
Query 164158 CTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCA 164217
|||||| |||||||||||||| ||| || || ||||| |||||||||||||||| |||
Sbjct 10405 CTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCA 10464
Query 164218 ACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACT 164277
|| | || | |||||| | || || || | | | |||||||||||||||||||| ||
Sbjct 10465 GCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCT 10524
Query 164278 TTCTTACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGC 164337
||||| |||| | || ||||||||||||||| ||||| |||||||||||||| || ||
Sbjct 10525 TTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGC 10584
Query 164338 AGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCC 164397
||| | || || ||| | || || || ||||||| |||||||||||||||| ||||||
Sbjct 10585 AGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCC 10644
Query 164398 TCTGGGCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCT 164457
||| || || |||||||| ||||||| |||| | || |||||||||||||||||||||||
Sbjct 10645 TCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCT 10704
Query 164458 CATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGC 164517
|||||||| ||||| ||||| || || || ||||| || || ||||| || ||| |||
Sbjct 10705 TATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGC 10764
Query 164518 AATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCA 164577
|||||||||||| || || ||||| || || | |||||||| || || || |||||
Sbjct 10765 AATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGC 10824
Query 164578 GAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGG 164637
||| || |||||||| || || |||||||| || ||||||||||| || || |||||
Sbjct 10825 AAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGG 10884
Query 164638 TTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTT 164697
|||||| || ||||| || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct 10885 TTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTT 10944
Query 164698 CTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCAT 164757
|||||||||| ||||| || | || |||||||| || ||| |||| || || ||
Sbjct 10945 CTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTAT 11004
Query 164758 GGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGT 164817
||| |||||||| ||||| ||||||||||||||||| | | ||| | || |||||
Sbjct 11005 GGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGT 11064
Query 164818 GCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGA 164877
| ||||| ||||| || | | ||||||||| || || |||||||| ||||||||
Sbjct 11065 AATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGA 11124
Query 164878 GCGTAATGCTCACAACTTCCCTCTCGACCTTGC 164910
|||||| |||||||||||||| || ||||||||
Sbjct 11125 GCGTAACGCTCACAACTTCCCACTTGACCTTGC 11157
Score = 832 bits (922), Expect = 0.0
Identities = 782/993 (79%), Gaps = 2/993 (0%)
Strand=Plus/Minus
Query 163919 TGGGAACAATTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTC 163978
|||| || || ||| ||| | |||||||| || || ||| | || |||||||||||
Sbjct 36977 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 36918
Query 163979 GGCGTCCTGATGATTCCCTGCCTG-CTGGCAGCGACTACATGTTTCATCATCGCCTTCAT 164037
|| || | ||||| |||| | | || |||| ||| || |||||| | || || ||
Sbjct 36917 GGAGTATTAATGAT-CCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTAT 36859
Query 164038 CGGTGCTCCTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTA 164097
| |||||||||||| || |||||||| ||||| || || || |||| || || |||||
Sbjct 36858 TGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTA 36799
Query 164098 TGGAAACAACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTT 164157
|||||||||||||||||||||||||| |||||| | |||||||||||||| || |||||
Sbjct 36798 CGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTT 36739
Query 164158 CTACCCCATCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCA 164217
|||||| |||||||||||||| ||| || || ||||| |||||||||||||||| |||
Sbjct 36738 CTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCA 36679
Query 164218 ACTCGTTGTGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACT 164277
|| | || | |||||| | || || || | | | |||||||||||||||||||| ||
Sbjct 36678 GCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCT 36619
Query 164278 TTCTTACCGTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGC 164337
||||| |||| | || ||||||||||||||| ||||| |||||||||||||| || ||
Sbjct 36618 TTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGC 36559
Query 164338 AGCGAGTGCAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCC 164397
||| | || || ||| | || || || ||||||| |||||||||||||||| ||||||
Sbjct 36558 AGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCC 36499
Query 164398 TCTGGGCATCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCT 164457
||| || || |||||||| ||||||| |||| | || |||||||||||||||||||||||
Sbjct 36498 TCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCT 36439
Query 164458 CATGCACCCCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGC 164517
|||||||| ||||| ||||| || || || ||||| || || ||||| || ||| |||
Sbjct 36438 TATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGC 36379
Query 164518 AATGCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCA 164577
|||||||||||| || || ||||| || || | |||||||| || || || |||||
Sbjct 36378 AATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGC 36319
Query 164578 GAACTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGG 164637
||| || |||||||| || || |||||||| || ||||||||||| || || |||||
Sbjct 36318 AAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGG 36259
Query 164638 TTACTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTT 164697
|||||| || ||||| || |||||||||||||| ||||||||||| ||||| || |||||
Sbjct 36258 TTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTT 36199
Query 164698 CTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCAT 164757
|||||||||| ||||| || | || |||||||| || ||| |||| || || ||
Sbjct 36198 CTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTAT 36139
Query 164758 GGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGT 164817
||| |||||||| ||||| ||||||||||||||||| | | ||| | || |||||
Sbjct 36138 GGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGT 36079
Query 164818 GCTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGA 164877
| ||||| ||||| || | | ||||||||| || || |||||||| ||||||||
Sbjct 36078 AATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGA 36019
Query 164878 GCGTAATGCTCACAACTTCCCTCTCGACCTTGC 164910
|||||| |||||||||||||| || ||||||||
Sbjct 36018 GCGTAACGCTCACAACTTCCCACTTGACCTTGC 35986
Score = 590 bits (654), Expect = 7e-164
Identities = 747/1024 (73%), Gaps = 2/1024 (0%)
Strand=Plus/Plus
Query 165147 GGTTGGTTCGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGG 165206
|| ||||| || | | |||||||||||||| | || |||||||| || || || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 165207 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGAC 165265
|| ||| || || || |||||| ||| || |||| |||| || ||| ||||||| ||
Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 165266 TACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAA 165325
|| ||||| || ||||| || ||||| | || ||||| || |||||||| ||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 165326 CTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCT 165385
||| ||||| ||||||| || || ||| | || ||||| ||| || ||||| || ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 165386 ATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGAC 165445
||||| || || | ||||| || |||| || ||||| || ||||| ||| | |||||
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 165446 TTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACT 165505
|| || || || ||||| || || | | | || || || ||||| || || |||||| |
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 165506 GGCACGACTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCTGGTCCTATTGCTGT 165565
||||| | |||||||| ||||| || ||||| ||||| | ||||| |||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 165566 ATTCGTTAGTGTTTTTCTTATGTATCCTCTGGGACAATCGTCCTGGTTCTTCGCACCGTC 165625
||| || ||| || ||||| || || || |||||||| |||||||| ||||| ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 165626 GTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGAC 165685
|| || || || | ||| ||||| ||| | || ||| ||||||||||||| ||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 165686 GCTGAATCCCTTTCACATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGC 165745
|| || || || ||||||||||| ||||| ||| | | || | |||| | |||| |||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 165746 CATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTT 165805
||||| || | || |||||||| || | | ||||||||||| ||||||||||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647
Query 165806 CAAAGCATTTGATAGTACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTT 165865
| |||||| | ||||| | || || ||||| || ||||| || || ||||||||
Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707
Query 165866 CTGGTCTCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCT 165925
|||||| |||||||| ||| | |||||| || ||||||||||||||||||||||||||
Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767
Query 165926 CTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAA 165985
|| || ||||| | || | |||| | ||||| | | || | ||||| ||
Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827
Query 165986 TCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGA 166045
|| ||||| || || || || || || ||||| | || ||||| ||||| ||||||||
Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887
Query 166046 AACGTTCTATACGAAAAACATCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGT 166105
||| ||||| || || || || || ||||| ||||| | ||||| ||| |||| ||
Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947
Query 166106 AGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACT 166165
||| || |||||||| ||| |||| |||||||| || || | ||| | || ||||| ||
Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007
Query 166166 TTAA 166169
||||
Sbjct 3008 TTAA 3011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557654267557080
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