Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq19 812 0.0
>seq19
Length=72585
Score = 812 bits (900), Expect = 0.0
Identities = 780/995 (78%), Gaps = 6/995 (1%)
Strand=Plus/Plus
Query 177589 TGGGAACAATTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTC 177648
|||| || || ||| ||| | || || || | || ||||| || |||||||||||
Sbjct 10166 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 10225
Query 177649 GGTGTCCTGATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGT 177707
|| || | ||||||||||| | || | || || || || |||||||| || || |
Sbjct 10226 GGAGTATTAATGATCCCTACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTAT 10284
Query 177708 CGCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTA 177767
|||||||||||||| || ||||| || |||||||| || || |||| || || |||||
Sbjct 10285 TGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTA 10344
Query 177768 TGGCAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTT 177827
|| ||||||||||| ||||||||||| | ||| | ||||||||||| || || |||||
Sbjct 10345 CGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTT 10404
Query 177828 CTATCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCA 177887
||| || |||||||||||||||||||| ||||||||||| ||||| |||||||||| |||
Sbjct 10405 CTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCA 10464
Query 177888 ACTCGTTATCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACT 177947
|| | | | |||||| | ||||| || | | |||||||||||||||||||||| ||
Sbjct 10465 GCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCT 10524
Query 177948 TTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGC 178007
||||| ||| |||| |||||||| ||||| |||||| ||||||||||| || || ||
Sbjct 10525 TTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGC 10584
Query 178008 AGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCC 178067
|||| | ||||||||| | || || || ||||||| |||||||||||||| | |||||
Sbjct 10585 AGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCC 10644
Query 178068 CCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCT 178127
|| ||||| ||| || ||||||| |||| | || ||||| || ||||||||||||||
Sbjct 10645 TCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCT 10704
Query 178128 GATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGC 178187
|||||||| ||||||||| | || || |||||||| || |||||||| || ||| |||
Sbjct 10705 TATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGC 10764
Query 178188 GATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACCGAGAACGAAAGTCA 178247
||||||||||| || || ||||| || || | ||||| || || ||||||| ||||
Sbjct 10765 AATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACG--AGTCT 10822
Query 178248 G--AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCAT 178305
| ||| || ||||||||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct 10823 GCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACAC 10882
Query 178306 GGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCAC 178365
||||||||||| || || |||||||||||||| || ||||||||||| ||||| || |||
Sbjct 10883 GGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCAC 10942
Query 178366 TTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACC 178425
|||||||||||| ||||| || | || ||||||||||| ||| | ||| || ||
Sbjct 10943 TTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACT 11002
Query 178426 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAA 178485
||||| |||||||| ||||| ||||||||||||||||| | | ||| | ||
Sbjct 11003 ATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGT 11062
Query 178486 GTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCAC 178545
|| | ||||| ||||| || | | ||||||||| || ||||||||||| ||||||
Sbjct 11063 GTAATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCAC 11122
Query 178546 GAGCGTAATGCTCACAACTTCCCTCTTGACCTCGC 178580
|||||||| |||||||||||||| |||||||| ||
Sbjct 11123 GAGCGTAACGCTCACAACTTCCCACTTGACCTTGC 11157
Score = 812 bits (900), Expect = 0.0
Identities = 780/995 (78%), Gaps = 6/995 (1%)
Strand=Plus/Minus
Query 177589 TGGGAACAATTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTC 177648
|||| || || ||| ||| | || || || | || ||||| || |||||||||||
Sbjct 36977 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 36918
Query 177649 GGTGTCCTGATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGT 177707
|| || | ||||||||||| | || | || || || || |||||||| || || |
Sbjct 36917 GGAGTATTAATGATCCCTACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTAT 36859
Query 177708 CGCTGCTCCTCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTA 177767
|||||||||||||| || ||||| || |||||||| || || |||| || || |||||
Sbjct 36858 TGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTA 36799
Query 177768 TGGCAACAACATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTT 177827
|| ||||||||||| ||||||||||| | ||| | ||||||||||| || || |||||
Sbjct 36798 CGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTT 36739
Query 177828 CTATCCCATCTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCA 177887
||| || |||||||||||||||||||| ||||||||||| ||||| |||||||||| |||
Sbjct 36738 CTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCA 36679
Query 177888 ACTCGTTATCTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACT 177947
|| | | | |||||| | ||||| || | | |||||||||||||||||||||| ||
Sbjct 36678 GCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCT 36619
Query 177948 TTCTTACCGCCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGC 178007
||||| ||| |||| |||||||| ||||| |||||| ||||||||||| || || ||
Sbjct 36618 TTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGC 36559
Query 178008 AGCATCTGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCC 178067
|||| | ||||||||| | || || || ||||||| |||||||||||||| | |||||
Sbjct 36558 AGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCC 36499
Query 178068 CCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCT 178127
|| ||||| ||| || ||||||| |||| | || ||||| || ||||||||||||||
Sbjct 36498 TCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCT 36439
Query 178128 GATGCACCCCTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGC 178187
|||||||| ||||||||| | || || |||||||| || |||||||| || ||| |||
Sbjct 36438 TATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGC 36379
Query 178188 GATGCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACCGAGAACGAAAGTCA 178247
||||||||||| || || ||||| || || | ||||| || || |||||||| |||
Sbjct 36378 AATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGA--GTCT 36321
Query 178248 G--AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCAT 178305
| ||| || ||||||||||| |||||||||||||| ||||||||||| ||||| ||
Sbjct 36320 GCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACAC 36261
Query 178306 GGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCAC 178365
||||||||||| || || |||||||||||||| || ||||||||||| ||||| || |||
Sbjct 36260 GGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCAC 36201
Query 178366 TTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACC 178425
|||||||||||| ||||| || | || ||||||||||| ||| | ||| || ||
Sbjct 36200 TTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACT 36141
Query 178426 ATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAA 178485
||||| |||||||| ||||| ||||||||||||||||| | | ||| | ||
Sbjct 36140 ATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGT 36081
Query 178486 GTCCTGAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCAC 178545
|| | ||||| ||||| || | | ||||||||| || ||||||||||| ||||||
Sbjct 36080 GTAATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCAC 36021
Query 178546 GAGCGTAATGCTCACAACTTCCCTCTTGACCTCGC 178580
|||||||| |||||||||||||| |||||||| ||
Sbjct 36020 GAGCGTAACGCTCACAACTTCCCACTTGACCTTGC 35986
Score = 646 bits (716), Expect = 1e-180
Identities = 757/1020 (74%), Gaps = 2/1020 (0%)
Strand=Plus/Plus
Query 178833 GGGTGGTTTGATGTACTCGATGACTGGCTTAAGCGTGATCGGTTCGTTTTTGTTGGTTGG 178892
|| |||||||| | || |||||||||||||||||||| ||||| || || ||||||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 178893 TCAGGTCTTCTTCTGTTCCCTACTGCTTACATGGCACTGGGCGGTTGGCTCACGGGCACA 178952
||||| || | | ||||| ||| ||| | ||| | || || ||| | || || |||
Sbjct 2049 TCAGGAATTTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACA 2108
Query 178953 ACATTCGTCACCTCGTGGTATACTCACGGGATTGCTTCTTCGTATCTTGAGGGATGTAAT 179012
|||||||| || || ||||| || ||||| | || ||| || ||||||||||||||
Sbjct 2109 ACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAAC 2168
Query 179013 TTCCTTACTGCTGCTGTATCAACTCCTGCTGACGCTCTCGGACATTCCCTACTTCTTCTA 179072
|||||||| | || |||||||| || || || | | | || || || ||||| ||
Sbjct 2169 TTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTT 2228
Query 179073 TGGGGTCCAGAAGCTCAGGGAGATTTCGTCCGCTGGCTCCAACTTGGGGGACTATGGCCT 179132
||||| |||||||| || || || ||| || ||| || ||||| ||| ||||| |
Sbjct 2229 TGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACA 2288
Query 179133 TTTGTGGCGCTCCACGGTGCCTTCGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAATC 179192
|| || || || |||||||| |||| | || || || ||||| || || ||||||||
Sbjct 2289 TTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATT 2348
Query 179193 GCACGTCTAGTCGGTATTCGTCCTTACAATGCAATCGCGTTTTCTGGTCCAATTGCTGTC 179252
|||||| ||| |||||||| ||||| || || || || || | || || |||||
Sbjct 2349 GCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTA 2408
Query 179253 TTTGTGTCTGTTTTTCTCATGTATCCTCTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCG 179312
||||| ||||| || || || || || || ||||| || ||||||||||| || ||
Sbjct 2409 TTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTCA 2468
Query 179313 TTTGGAGTTGCAGCGATTTTCCGCTTCCTACTCTTCCTACAGGGCTTCCACAACTGGACG 179372
||||| || || | |||||||| ||| | || ||| | || || ||||||||||||||
Sbjct 2469 TTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGACA 2528
Query 179373 CTCAACCCGTTCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCC 179432
|| ||||| |||||||||||||| ||||| ||| | || || | |||| | ||||||||
Sbjct 2529 CTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGCG 2588
Query 179433 ATTCATGGTGCTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTC 179492
||||| || || || |||||||||||||| || ||||| |||| ||||| || |||
Sbjct 2589 ATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTTC 2648
Query 179493 AAGGCATTCGAGCCTACACAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTC 179552
||||| | || || |||| || ||||| || || ||||| || || |||||||||
Sbjct 2649 CGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTTC 2708
Query 179553 TGGTCTCAGATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTG 179612
||||| ||||| || ||| | || ||| || ||||||||||| || ||||||||| |
Sbjct 2709 TGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCTT 2768
Query 179613 TTTGTTCCTGTCATGGGTCTTTGGACCTCTAGCA-TTGGTATTATTGGTCTTGCACTTAA 179671
|| || ||||| | || | |||| || |||| ||||| || | || | ||||||||
Sbjct 2769 TTCGTACCTGTAACAGGGTTATGGATGTC-AGCACTTGGTGTTGTAGGATTAGCACTTAA 2827
Query 179672 CCTTAGAGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGA 179731
||| | || || ||||| || |||||||||||| | || || || ||||||||||| ||
Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887
Query 179732 GACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGT 179791
|| ||||| || ||||| || || | || |||||| | ||||| ||||||||| |
Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947
Query 179792 CGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCT 179851
||||| || ||||||||| ||||||| ||||| || ||| | ||| | || ||||||||
Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/71 (89%), Gaps = 1/71 (1%)
Strand=Plus/Minus
Query 18369 GGGTAGGTGTCCGAGTGGTTAATGGAGGCGGACTGTAAATCCGCTGGCTCTGCCTACGGG 18428
|||| | || ||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 27603 GGGTCGATGCCCGAGTGGTTAATGGGGGCGGACTGTAAATCCGCTGGCT-TGCCTACACT 27545
Query 18429 GGTTCAAATCC 18439
|||||||||||
Sbjct 27544 GGTTCAAATCC 27534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596307058377040
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