Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_031944.1
Length=185102
Score E
Sequences producing significant alignments: (Bits) Value
seq19 780 0.0
>seq19
Length=72585
Score = 780 bits (864), Expect = 0.0
Identities = 768/992 (77%), Gaps = 0/992 (0%)
Strand=Plus/Plus
Query 169343 TGGGAACAATTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTC 169402
|||| || || ||| ||| | || || ||||| |||||||| || |||||||||||
Sbjct 10166 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 10225
Query 169403 GGCGTCCTGATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATC 169462
|| || | |||||||| | || ||||||| | |||||| | || || ||
Sbjct 10226 GGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATT 10285
Query 169463 GGTGCTCCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTAT 169522
| |||||| ||||| || ||||| || ||||| || || || |||| || || |||||
Sbjct 10286 GCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTAC 10345
Query 169523 GGTAACAACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTC 169582
|| ||||||||||||||||||||||| | || | || ||||| ||||| |||||||||
Sbjct 10346 GGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTC 10405
Query 169583 TATCCCATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAA 169642
|| || |||||||||||||| ||| ||||| ||| | |||||||||||||||| |||
Sbjct 10406 TACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAG 10465
Query 169643 CTGGTTGTCTTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTG 169702
|| | || | |||||| ||||||| || | | | |||||||||||||||||||| |
Sbjct 10466 CTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTT 10525
Query 169703 TCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCA 169762
|| | ||| | || ||||| |||||||| ||| |||||||||||||| || || |||
Sbjct 10526 TCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCA 10585
Query 169763 GCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCT 169822
|| | ||||| ||| | || ||||| | || || || || |||||||| | ||||||
Sbjct 10586 GCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCT 10645
Query 169823 CTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTC 169882
|| ||||| || ||||| || |||| |||| | || ||||| |||||||||||||||||
Sbjct 10646 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 10705
Query 169883 ATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCG 169942
|||||||| |||||||||||||||||||| || || || ||||| || || || ||
Sbjct 10706 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCA 10765
Query 169943 ATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAG 170002
||||||||| ||||| ||||| ||| ||||||| || || |||||||||||
Sbjct 10766 ATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCA 10825
Query 170003 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGT 170062
||| || ||||||||||| |||||||||||||| ||||||||||| || || ||||||
Sbjct 10826 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGT 10885
Query 170063 TACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTC 170122
|||||||| || || ||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 10886 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 10945
Query 170123 TTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATG 170182
||||||||| ||||| || | || ||||||||||| ||| | ||| | || || |||
Sbjct 10946 TTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATG 11005
Query 170183 GCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTG 170242
|| |||||||| ||||| ||||||||||||||||| | | ||| | || |||||
Sbjct 11006 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTA 11065
Query 170243 CTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAG 170302
| ||||| ||||| || | | ||||||||| || || |||||||| |||||||||
Sbjct 11066 ATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAG 11125
Query 170303 CGTAATGCTCACAACTTCCCTCTCGACCTCGC 170334
||||| |||||||||||||| || ||||| ||
Sbjct 11126 CGTAACGCTCACAACTTCCCACTTGACCTTGC 11157
Score = 780 bits (864), Expect = 0.0
Identities = 768/992 (77%), Gaps = 0/992 (0%)
Strand=Plus/Minus
Query 169343 TGGGAACAATTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTC 169402
|||| || || ||| ||| | || || ||||| |||||||| || |||||||||||
Sbjct 36977 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 36918
Query 169403 GGCGTCCTGATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATC 169462
|| || | |||||||| | || ||||||| | |||||| | || || ||
Sbjct 36917 GGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATT 36858
Query 169463 GGTGCTCCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTAT 169522
| |||||| ||||| || ||||| || ||||| || || || |||| || || |||||
Sbjct 36857 GCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTAC 36798
Query 169523 GGTAACAACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTC 169582
|| ||||||||||||||||||||||| | || | || ||||| ||||| |||||||||
Sbjct 36797 GGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTC 36738
Query 169583 TATCCCATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAA 169642
|| || |||||||||||||| ||| ||||| ||| | |||||||||||||||| |||
Sbjct 36737 TACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAG 36678
Query 169643 CTGGTTGTCTTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTG 169702
|| | || | |||||| ||||||| || | | | |||||||||||||||||||| |
Sbjct 36677 CTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTT 36618
Query 169703 TCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCA 169762
|| | ||| | || ||||| |||||||| ||| |||||||||||||| || || |||
Sbjct 36617 TCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCA 36558
Query 169763 GCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCT 169822
|| | ||||| ||| | || ||||| | || || || || |||||||| | ||||||
Sbjct 36557 GCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCT 36498
Query 169823 CTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTC 169882
|| ||||| || ||||| || |||| |||| | || ||||| |||||||||||||||||
Sbjct 36497 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 36438
Query 169883 ATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCG 169942
|||||||| |||||||||||||||||||| || || || ||||| || || || ||
Sbjct 36437 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCA 36378
Query 169943 ATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAG 170002
||||||||| ||||| ||||| ||| ||||||| || || |||||||||||
Sbjct 36377 ATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCA 36318
Query 170003 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGT 170062
||| || ||||||||||| |||||||||||||| ||||||||||| || || ||||||
Sbjct 36317 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGT 36258
Query 170063 TACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTC 170122
|||||||| || || ||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 36257 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 36198
Query 170123 TTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATG 170182
||||||||| ||||| || | || ||||||||||| ||| | ||| | || || |||
Sbjct 36197 TTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATG 36138
Query 170183 GCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTG 170242
|| |||||||| ||||| ||||||||||||||||| | | ||| | || |||||
Sbjct 36137 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTA 36078
Query 170243 CTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAG 170302
| ||||| ||||| || | | ||||||||| || || |||||||| |||||||||
Sbjct 36077 ATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAG 36018
Query 170303 CGTAATGCTCACAACTTCCCTCTCGACCTCGC 170334
||||| |||||||||||||| || ||||| ||
Sbjct 36017 CGTAACGCTCACAACTTCCCACTTGACCTTGC 35986
Score = 601 bits (666), Expect = 4e-167
Identities = 753/1028 (73%), Gaps = 6/1028 (1%)
Strand=Plus/Plus
Query 170589 GGGTGGTTCGATGTCCTGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGG 170648
|| ||||| || | | || ||||||||||| |||||||| || ||||| || || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 170649 TCTGGACTTCTTCTTTTTCCCA-CTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCAC 170707
|| ||| || || || |||||| ||| || ||||| |||| || ||| |||| || ||
Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 170708 GACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAA 170767
||||| || || |||||||| ||||| | |||||||| |||||||| || |||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 170768 TTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 170827
||||||||| |||| || ||||| || || | ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 170828 TTGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAA 170887
|||||| || || | || || || ||| ||| |||| || ||||| ||| | ||||
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 170888 TTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAAT 170947
|| || || || ||||| || || | | || || || ||||| || || ||||||||
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 170948 CAGTCGTCTCGTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGT 171007
||| ||| ||| | |||||||| || || || ||||| | |||||||||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 171008 GTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTC 171067
||||| || ||||| || || || ||||| || ||| | |||||||| ||||||||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 171068 CTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGAC 171127
||||| || || | ||| ||||| ||| | || ||| | ||||| ||||||||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 171128 ACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGC 171187
||| || ||||| || |||||||| || || ||| | || || | ||| | |||| |||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 171188 AATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTT 171247
||||| || | || |||||||| || | | |||||||||||| ||||||| ||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647
Query 171248 TAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTT 171307
|||||| || | ||||| | |||||||| || || ||||| || || || |||||
Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707
Query 171308 CTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCT 171367
|||||| |||||||| ||| | || ||| || ||||||||| | || |||||||||||
Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767
Query 171368 GTTTGTTCCTGTCATGGGTCTTTGG--GTCAGTAGTCTGGGGATTATTGGTCTTGCTCTT 171425
|| || ||||| | || | ||| ||||| | || || || | || | || |||
Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCA--CTTGGTGTTGTAGGATTAGCACTT 2825
Query 171426 AATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTC 171485
|| || | || || || |||||| || ||| || | ||||| |||||||| |||||
Sbjct 2826 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTT 2885
Query 171486 GAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCA 171545
|| || ||||| || ||||| || || | || |||||| ||||||||||||||||| |
Sbjct 2886 GAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCT 2945
Query 171546 GTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCA 171605
||| || || ||||||||| |||| ||||| ||||| || || || ||||| || ||
Sbjct 2946 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 3005
Query 171606 CTTTGATT 171613
|||| |||
Sbjct 3006 CTTTAATT 3013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592198259352880
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