Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq19 780 0.0 >seq19 Length=72585 Score = 780 bits (864), Expect = 0.0 Identities = 768/992 (77%), Gaps = 0/992 (0%) Strand=Plus/Plus Query 169343 TGGGAACAATTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTC 169402 |||| || || ||| ||| | || || ||||| |||||||| || ||||||||||| Sbjct 10166 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 10225 Query 169403 GGCGTCCTGATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATC 169462 || || | |||||||| | || ||||||| | |||||| | || || || Sbjct 10226 GGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATT 10285 Query 169463 GGTGCTCCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTAT 169522 | |||||| ||||| || ||||| || ||||| || || || |||| || || ||||| Sbjct 10286 GCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTAC 10345 Query 169523 GGTAACAACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTC 169582 || ||||||||||||||||||||||| | || | || ||||| ||||| ||||||||| Sbjct 10346 GGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTC 10405 Query 169583 TATCCCATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAA 169642 || || |||||||||||||| ||| ||||| ||| | |||||||||||||||| ||| Sbjct 10406 TACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAG 10465 Query 169643 CTGGTTGTCTTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTG 169702 || | || | |||||| ||||||| || | | | |||||||||||||||||||| | Sbjct 10466 CTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTT 10525 Query 169703 TCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCA 169762 || | ||| | || ||||| |||||||| ||| |||||||||||||| || || ||| Sbjct 10526 TCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCA 10585 Query 169763 GCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCT 169822 || | ||||| ||| | || ||||| | || || || || |||||||| | |||||| Sbjct 10586 GCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCT 10645 Query 169823 CTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTC 169882 || ||||| || ||||| || |||| |||| | || ||||| ||||||||||||||||| Sbjct 10646 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 10705 Query 169883 ATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCG 169942 |||||||| |||||||||||||||||||| || || || ||||| || || || || Sbjct 10706 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCA 10765 Query 169943 ATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAG 170002 ||||||||| ||||| ||||| ||| ||||||| || || ||||||||||| Sbjct 10766 ATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCA 10825 Query 170003 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGT 170062 ||| || ||||||||||| |||||||||||||| ||||||||||| || || |||||| Sbjct 10826 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGT 10885 Query 170063 TACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTC 170122 |||||||| || || ||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct 10886 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 10945 Query 170123 TTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATG 170182 ||||||||| ||||| || | || ||||||||||| ||| | ||| | || || ||| Sbjct 10946 TTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATG 11005 Query 170183 GCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTG 170242 || |||||||| ||||| ||||||||||||||||| | | ||| | || ||||| Sbjct 11006 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTA 11065 Query 170243 CTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAG 170302 | ||||| ||||| || | | ||||||||| || || |||||||| ||||||||| Sbjct 11066 ATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAG 11125 Query 170303 CGTAATGCTCACAACTTCCCTCTCGACCTCGC 170334 ||||| |||||||||||||| || ||||| || Sbjct 11126 CGTAACGCTCACAACTTCCCACTTGACCTTGC 11157 Score = 780 bits (864), Expect = 0.0 Identities = 768/992 (77%), Gaps = 0/992 (0%) Strand=Plus/Minus Query 169343 TGGGAACAATTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTC 169402 |||| || || ||| ||| | || || ||||| |||||||| || ||||||||||| Sbjct 36977 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 36918 Query 169403 GGCGTCCTGATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATC 169462 || || | |||||||| | || ||||||| | |||||| | || || || Sbjct 36917 GGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATT 36858 Query 169463 GGTGCTCCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTAT 169522 | |||||| ||||| || ||||| || ||||| || || || |||| || || ||||| Sbjct 36857 GCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTAC 36798 Query 169523 GGTAACAACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTC 169582 || ||||||||||||||||||||||| | || | || ||||| ||||| ||||||||| Sbjct 36797 GGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTC 36738 Query 169583 TATCCCATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAA 169642 || || |||||||||||||| ||| ||||| ||| | |||||||||||||||| ||| Sbjct 36737 TACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAG 36678 Query 169643 CTGGTTGTCTTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTG 169702 || | || | |||||| ||||||| || | | | |||||||||||||||||||| | Sbjct 36677 CTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTT 36618 Query 169703 TCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCA 169762 || | ||| | || ||||| |||||||| ||| |||||||||||||| || || ||| Sbjct 36617 TCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCA 36558 Query 169763 GCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCT 169822 || | ||||| ||| | || ||||| | || || || || |||||||| | |||||| Sbjct 36557 GCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCT 36498 Query 169823 CTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTC 169882 || ||||| || ||||| || |||| |||| | || ||||| ||||||||||||||||| Sbjct 36497 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 36438 Query 169883 ATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCG 169942 |||||||| |||||||||||||||||||| || || || ||||| || || || || Sbjct 36437 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCA 36378 Query 169943 ATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAG 170002 ||||||||| ||||| ||||| ||| ||||||| || || ||||||||||| Sbjct 36377 ATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCA 36318 Query 170003 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGT 170062 ||| || ||||||||||| |||||||||||||| ||||||||||| || || |||||| Sbjct 36317 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGT 36258 Query 170063 TACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTC 170122 |||||||| || || ||||||||||||||||| ||||||||||| |||||||| |||||| Sbjct 36257 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 36198 Query 170123 TTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATG 170182 ||||||||| ||||| || | || ||||||||||| ||| | ||| | || || ||| Sbjct 36197 TTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATG 36138 Query 170183 GCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTG 170242 || |||||||| ||||| ||||||||||||||||| | | ||| | || ||||| Sbjct 36137 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTA 36078 Query 170243 CTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAG 170302 | ||||| ||||| || | | ||||||||| || || |||||||| ||||||||| Sbjct 36077 ATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAG 36018 Query 170303 CGTAATGCTCACAACTTCCCTCTCGACCTCGC 170334 ||||| |||||||||||||| || ||||| || Sbjct 36017 CGTAACGCTCACAACTTCCCACTTGACCTTGC 35986 Score = 601 bits (666), Expect = 4e-167 Identities = 753/1028 (73%), Gaps = 6/1028 (1%) Strand=Plus/Plus Query 170589 GGGTGGTTCGATGTCCTGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGG 170648 || ||||| || | | || ||||||||||| |||||||| || ||||| || || ||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 170649 TCTGGACTTCTTCTTTTTCCCA-CTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCAC 170707 || ||| || || || |||||| ||| || ||||| |||| || ||| |||| || || Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 170708 GACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAA 170767 ||||| || || |||||||| ||||| | |||||||| |||||||| || ||| Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 170768 TTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 170827 ||||||||| |||| || ||||| || || | ||||| ||| || |||||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 170828 TTGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAA 170887 |||||| || || | || || || ||| ||| |||| || ||||| ||| | |||| Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 170888 TTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAAT 170947 || || || || ||||| || || | | || || || ||||| || || |||||||| Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 170948 CAGTCGTCTCGTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGT 171007 ||| ||| ||| | |||||||| || || || ||||| | ||||||||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 171008 GTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTC 171067 ||||| || ||||| || || || ||||| || ||| | |||||||| |||||||| Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 171068 CTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGAC 171127 ||||| || || | ||| ||||| ||| | || ||| | ||||| |||||||||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 171128 ACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGC 171187 ||| || ||||| || |||||||| || || ||| | || || | ||| | |||| ||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 171188 AATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTT 171247 ||||| || | || |||||||| || | | |||||||||||| ||||||| || Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 171248 TAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTT 171307 |||||| || | ||||| | |||||||| || || ||||| || || || ||||| Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 171308 CTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCT 171367 |||||| |||||||| ||| | || ||| || ||||||||| | || ||||||||||| Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 171368 GTTTGTTCCTGTCATGGGTCTTTGG--GTCAGTAGTCTGGGGATTATTGGTCTTGCTCTT 171425 || || ||||| | || | ||| ||||| | || || || | || | || ||| Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCA--CTTGGTGTTGTAGGATTAGCACTT 2825 Query 171426 AATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTC 171485 || || | || || || |||||| || ||| || | ||||| |||||||| ||||| Sbjct 2826 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTT 2885 Query 171486 GAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCA 171545 || || ||||| || ||||| || || | || |||||| ||||||||||||||||| | Sbjct 2886 GAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCT 2945 Query 171546 GTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCA 171605 ||| || || ||||||||| |||| ||||| ||||| || || || ||||| || || Sbjct 2946 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 3005 Query 171606 CTTTGATT 171613 |||| ||| Sbjct 3006 CTTTAATT 3013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592198259352880