Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq564 84.2 2e-11 >seq564 Length=17261 Score = 84.2 bits (92), Expect = 2e-11 Identities = 118/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || |||||||| || | || || |||||||| | |||||| || ||||||||||| || Sbjct 9280 AGGCACGCGAAATCACGGTGAAGCCCTTCGTCGCGGCTGATGAGCTCGTTGGAAAACGTC 9221 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAA 16317 | ||| ||||| || || || || | |||| | || || ||| || ||||| || || Sbjct 9220 AGCCCGGGCATCAACCCGCGCTTTTTCAGCCAGTAGAT-GCTGCAGAACGACCCGGAGAA 9162 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 ||| | |||||| | | || || ||||| | ||| || ||| Sbjct 9161 GAAAACACCCTCGATGCACGCGAACGCGATGAGTCGCTCGGCG 9119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511407566225080