Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq564 86.0 6e-12 >seq564 Length=17261 Score = 86.0 bits (94), Expect = 6e-12 Identities = 165/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 || ||||| || |||||||||||||| | ||||| | ||||| || || ||||| Sbjct 9339 GAAGCCGTGGAGATTGAAAAAGAGTTCCTGTGCGACGCACTGCCCGTGTCCCTGGTGGGC 9398 Query 52897 ATGAAC-GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955 |||||| || | |||||| || ||||||||||| || ||||| || || || Sbjct 9399 ATGAACAAAGAGC-TGATGTCGGACTACATCGAGTTCGTCGCGGATCACTTGCTGTGCCA 9457 Query 52956 GCTCGGTCAGCCGAAATACTATAA-TGCGCGTAACCCCTTTTCGTTTATGAACAACATAT 53014 |||||| | | || | || || |||| ||||| || | ||| | ||| | Sbjct 9458 GCTCGGGCTGGAAAAGGAATACAACACCGCG-AACCCGTTCGACTGGATGGAGCTCATCT 9516 Query 53015 CGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTACAAAATGTTTGG 53072 |||| | || ||||| ||||||||||| | ||| || ||||||||| | | || ||| Sbjct 9517 CGCTTCAAGGTAAAACCAACTTTTTCGAAAAACGCGTAGGCGAGTACCAGAAGTCTGG 9574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496057371344800