Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq247 86.0 5e-12 >seq247 Length=13427 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||||||||||| | | ||| | ||||| ||| ||||| || ||||||||||| || Sbjct 6256 ACCTCCGCGCAGGCGGAGCACCAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCCGC 6197 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 | || | ||||| |||||||| || || |||| | |||||||| || || Sbjct 6196 GAGCGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCAGGGGG 6137 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676 | || ||||||||| |||||| ||| | | | || ||||| || | ||||||| Sbjct 6136 GATACCCTCCTTGTCCTGGATTTTCGCCTTCACGTTGTCG--ATGGTGTCCGAAGACTCC 6079 Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGA 48704 ||||| || ||||| ||||| |||| Sbjct 6078 ACCTCGAGGGTGATGGTCTTACCCGTGA 6051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421245711755069