Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq564 82.4 1e-10 >seq564 Length=17261 Score = 82.4 bits (90), Expect = 1e-10 Identities = 118/164 (72%), Gaps = 2/164 (1%) Strand=Plus/Minus Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| || || |||||||| | ||| || || ||||| | || || || |||||||||| Sbjct 9285 ACAACAGGCACGCGAAATCACGGTGAAGCCCTTCGTCGCGGCTGATGAGCTCGTTGGAAA 9226 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 |||| || |||||||| | || |||||||| ||||| | ||| ||| || || | Sbjct 9225 ACGTCAGCCCGGGCATCAACCCGCGCTTTTTCAGCCAGTAGATGCTGCAGAACGACCCGG 9166 Query 33416 AAAAGAAGATTCCTTCTACTGCA-GCAAAGGCAATAAGTCTCTC 33458 | ||||| | || || | |||| || || || || |||| ||| Sbjct 9165 AGAAGAAAACACCCTCGA-TGCACGCGAACGCGATGAGTCGCTC 9123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622938875868040