Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq633 219 1e-51 >seq633 Length=11014 Score = 219 bits (242), Expect = 1e-51 Identities = 611/926 (66%), Gaps = 15/926 (2%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| || || || |||||| || ||||| || | | || | || || ||| Sbjct 5999 TTCGGGTACAAAACCCTGGAGAGGTCGTACCTGCTGCGCCTTGACGGCAAAATCGTGGAA 5940 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||| || | ||||| || | || || ||||| | |||||| || | Sbjct 5939 CGGCCCCAGCACCTGCTCATGCGCGTCTCCATCGGCATCCA---CAAGGATGTGGAGAAC 5883 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCG-TGTATTCACGCACGCCACGCCAACAAT 363569 || || || || || | | || || | || || || |||||||| |||| || | Sbjct 5882 GCCATCGATACGTACCACATGCTCAGCGAGCGCTGGATG-ACGCACGCGTCGCCCACGCT 5824 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 || ||| || || | || ||| | || || ||||| || | |||||||| Sbjct 5823 GTTCAACAGCGGTACGCCCCGCCCGCAGCTCTCGTCGTGCTTCCTGATCGCCATGAAGGA 5764 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 || |||||||||||||||| ||||| || ||| | || || || || ||| || Sbjct 5763 GGACTCCATCGAGGGTATCTACGACACCCTGAAGGAGTGCGCGTGCATCTCAAAGTCCGC 5704 Query 363690 AGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATTCGCGGCA 363748 ||||| || ||| | || |||||| | | || |||| | | ||||| ||||||| Sbjct 5703 CGGCGGTATCGGTCTGTCCATCCACGACATCCGAGGCACCGCGTCG-TACATCCGCGGCA 5645 Query 363749 CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808 || || ||| || || | || |||||||| || ||||| || | || ||| ||| Sbjct 5644 CAAACGGCACCTCAAACGGCATCGTCCCCATGCTGCGCGTGTTCAACGACACCGCGCGGT 5585 Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868 |||| ||||| || || || |||||||| || |||||||| || || || || || | Sbjct 5584 ACGTGGACCAAGGCGGGGGCAAGCGCAAGGGCGCGTTTGCGATCTACCTTGAACCGTGGC 5525 Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928 | ||| || || || | || || | |||| ||| || || || ||| ||| | Sbjct 5524 ACAGCGACATCTTCGACTGGCTCGATTTGAGGAAGAACCACGGCAAGGAAGAAGCGCGCG 5465 Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCA- 363987 | || || || ||||| | || ||| |||| || ||| || | |||||| || Sbjct 5464 CGCGCGACCTTTTCTACGGCCTGTGGACCAACGACCTGTTCATGCAGAGGGTGGAGTCAA 5405 Query 363988 --GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 || ||| ||| | || | ||||| |||| || || || || | ||| |||| Sbjct 5404 ACGG--CGAA-TGGACGCTGATGTGCCCGAACGAGTGCCCCGGGCTCGCGGATTGCTGGG 5348 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGG-AAAGGCTCGTAAGACA 364104 |||| | | | | ||| ||| ||| | ||| |||||| | ||||| Sbjct 5347 GTGAGGCGTTCGAAGAGAAGTACACGGCGTACGAAAAAGCGGGCAAAGGCAAG-AAGACC 5289 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || ||| || |||||||| || | || ||||| | || || || | ||| Sbjct 5288 ATCAAGGCGCAGCTCCTTTGGTTTGCGATTCTCGAATCGCAAGTAGAAACCGGCAACCCC 5229 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 || ||| ||| |||||| ||||||||||||| |||||||||||| |||| ||||| ||| Sbjct 5228 TACATGCTGTTCAAAGACGCGTGCAACCGCAAATCCAACCAGCAGAACCTGGGTACGATT 5169 Query 364225 CAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 | | | ||||| || || ||||| || || | ||| | || || || || || || Sbjct 5168 CGGTCGTCGAACCTGTGCACGGAGATCATCGAGTTCACGTCCCCGGAGGAAACCGCGGTG 5109 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCC 364310 || ||||| ||||| |||||||| || Sbjct 5108 TGCAACCTCGCGTCCATCGCGCTCCC 5083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303335748535958