Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq247 109 5e-19 seq46 107 2e-18 >seq247 Length=13427 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAA 25082 || ||||| ||||||| |||| |||||||| || ||||| ||||| ||||| Sbjct 6053 ACGGGTAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACGTGAAGGCG 6112 Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 |||||| ||||| || || || || |||||||| ||||| | ||||| || ||||| Sbjct 6113 AAAATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTCATTTTCGCGGGCAAG 6172 Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202 || | || |||| ||||| | | |||||||| || || || ||||||||||| || Sbjct 6173 CAGCTTGAGGATGGCCGCACGCTCGCGGATTACAACATCCAGAAGGAATCCACGCTTCAC 6232 Query 25203 TTAGTGCT 25210 | ||||| Sbjct 6233 CTGGTGCT 6240 >seq46 Length=36971 Score = 107 bits (118), Expect = 2e-18 Identities = 199/284 (70%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 51001 CAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCGTTCTTTGAACGGCCTG 51060 || |||| ||| ||| |||| |||| | || ||||| |||||| || || | | Sbjct 11292 CACCCCGAGTACGCCATGTACCGGATTTTACCGAAAATAGCGCGTTCCTTCCACCCCTGG 11233 Query 51061 TCGTGCACACCGCAAATTGACCACATACAACCCACATAAT-TGTTAGGATCGCGACCATC 51119 |||||||| || ||||||||| || ||||| || || | || || | || || Sbjct 11232 TCGTGCACGCCCACGATTGACCACGCGCACCCCACGTACCCTGATGGG-TCTCTTCCGTC 11174 Query 51120 CACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCATGT-CTGCACTAGGCG 51178 || ||| | |||||| ||||| || ||| ||| | | | | ||| ||| | | | Sbjct 11173 CAGCGAGTACTTATCGTTGAGAAAGATCGCA-AACTCCAGGGCTTGTTCTGGAGACGCGG 11115 Query 51179 TCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGCATCTTGCCCTCGC 51238 |||| |||| ||| ||||| ||||||||||| |||||| | ||||||||||| || || Sbjct 11114 TCCACTCCAGAATCTTCTTCGCCCAGTACATCCGCATGAACCCGTGCATCTTCCCGCCGA 11055 Query 51239 AACGAAGCT-GCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGT 51281 | |||| ||| ||| |||| |||||||| | |||||| || Sbjct 11054 AGGTGAGCTCGCG-TTGCGCCGCGTTCCACAGCTTGTCGTGCGT 11012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433322354413235