Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq157 111 3e-19 seq683 96.9 7e-15 seq92 95.1 2e-14 >seq157 Length=13471 Score = 111 bits (122), Expect = 3e-19 Identities = 130/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| || || || ||||| ||| | ||||| |||| || ||||| || || || Sbjct 3088 GGCCCCAACGGCGCTGGCAAGTCCACCTTCATCAAGCTCCTCACGGGCGAAGCCGAGCCC 3029 Query 280239 ACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCT 280298 || | ||||||||||| ||||||||||| || |||||||| |||||||| Sbjct 3028 GACATCGGCACGGTTTGGAAGCACCCCAACATGCGCTACGCCTACGTCGCGCAGCACGCG 2969 Query 280299 TTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCG 280354 ||||||||| ||||| | ||| |||| | ||| || ||| | ||||| | ||||| Sbjct 2968 TTCCACCACGTCGAGCAGCACTTGGAGAAGACCCCGAACGAGTACATCCGCTGGCG 2913 >seq683 Length=13165 Score = 96.9 bits (106), Expect = 7e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 280678 TGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGA 280737 ||||||| ||| ||||| ||| ||| | ||||| || || || || || || | Sbjct 3326 TGGGTCTTGACAAGGAGTTCGGAACGCACACGCGCATGGCCGCGCTGTCGGGCGGGCAAA 3385 Query 280738 AGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACG 280797 |||||||| | || |||| ||||| ||||| | || || ||| | | |||| |||| Sbjct 3386 AGGTCAAAGTCGTGATCGCGGCAGCGATGTGGAACCAACCCCACATCGTGATTCTGGACG 3445 Query 280798 AGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTGAGTGCTGCTCTGGACACAT 280857 |||| |||||||| ||||||||||| ||| ||||| || | |||| | || || | Sbjct 3446 AGCCCACCAACTACCTGGACCGCGATTCCCTCGGCGCCCTCGCGGGTGCTATTGAAACCT 3505 Query 280858 TTGGCGGCGGCGTCGT 280873 | | ||||| ||||| Sbjct 3506 TCGAAGGCGGTGTCGT 3521 >seq92 Length=17215 Score = 95.1 bits (104), Expect = 2e-14 Identities = 71/82 (87%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| | ||||||||||||||||||||| ||||||||||||| |||||| ||||||||| Sbjct 4025 AGCCTGATTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCAAGGGTTCGAG 4084 Query 142563 CCCCACATCGGGCAGAAGTCGC 142584 |||| ||| |||| || |||| Sbjct 4085 CCCCTTATCAGGCACAA-TCGC 4105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027822722169029