Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq633 226 5e-54 seq564 181 2e-40 >seq633 Length=11014 Score = 226 bits (250), Expect = 5e-54 Identities = 506/751 (67%), Gaps = 8/751 (1%) Strand=Plus/Plus Query 244675 GAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAAT 244734 ||| |||| | || |||||||| || || ||||||| | ||| ||| || || Sbjct 5085 GAGCGCGATGGACGCGAGGTTGCACACCGCGGTTTCCTCCGGGGACGTGAACTCGATGAT 5144 Query 244735 CTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTT 244794 ||| ||||| ||||| || || || ||||||| ||| || ||||| ||| ||| Sbjct 5145 CTCCGTGCACAGGTTCGACGACCGAATCGTACCCAGGTTCTGCTGGTTGGATTTGCGGTT 5204 Query 244795 GCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGA-CGC 244853 ||| ||||| ||| | |||||| |||| ||||| || | || | |||| | ||| Sbjct 5205 GCACGCGTCTTTGAACAGCATGTAGGGGTTGCCGGTTTCTACTTGCGATTCGAGAATCGC 5264 Query 244854 TGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTT-GCCCTCTGCCTCGTAGCGG 244912 ||| ||| | ||||||| ||| | | ||||| |||| || ||||| Sbjct 5265 AAA-CCAAAGGAGCTGCGCCTTGATGGTCTT-CTTGCCTTTGCCCGCTTTTTCGTACGCC 5322 Query 244913 GTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGG 244972 |||||| | |||||| | |||||| || | || ||||||||| |||| Sbjct 5323 GTGTACTTCTCTTCGAACGCCTCACCCCAGCAATCCGCGAGCCCGGGGCACTCGTTCGGG 5382 Query 244973 CACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAG 245032 ||||| || |||| |||||| || |||||||||||||| |||||| | |||| Sbjct 5383 CACATCAGCGTCCATTCGCCGTTTGACTCCACCCTCTGCATGAACAGGTCGTTGGTCCAC 5442 Query 245033 AGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCC 245092 ||| | | ||| ||||| | | | | || ||| ||| ||||||||||| || Sbjct 5443 AGGCCGTAGAAAAGGTCGCGCGCGCGCGCTTCTTCCTTGCCGTGGTTCTTCCTCAAATCG 5502 Query 245093 AAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGC 245152 | |||| |||| |||| |||||| || || | ||||| || | ||||| ||| Sbjct 5503 AGCCAGTCGAAGATGTCGCTGTGCCACGGTTCAAGGTAGATCGCAAACGCGCCCTTGCGC 5562 Query 245153 TTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACT 245212 ||| || || |||||||| || | || ||||||| | |||||| | || || Sbjct 5563 TTGCCCCCGCCTTGGTCCACGTACCGCGCGGTGTCGTTGAACACGCGCAGCATGGGGACG 5622 Query 245213 ATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTG 245272 |||||||| ||| |||||| ||||| |||||| | | |||| | || || | | Sbjct 5623 ATGCCGTTTGAGGTGCCGTTTGTGCCGCGGATGTACGACGCGGTGCCTCGGATGTCGTGG 5682 Query 245273 ATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCT 245332 ||||||| || | ||||||||| ||| |||||| ||||| ||| | |||||| Sbjct 5683 ATGGACAGACCGATACCGCCGGCGGACTTTGAGATGCACGCGCACTCCTTCAGGGTGTCG 5742 Query 245333 GCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTG-GGG 245391 || ||||| ||| |||| ||||||| || ||| ||||| || || ||||| ||| Sbjct 5743 TAGATACCCTCGATGGAGTCCTCCTTCATGGCGATCAGGAAGCACGACGAGAGCTGCGGG 5802 Query 245392 CTTGGGGC-TGCACGAGTTGAACAGAGTGGG 245421 | ||||| | | ||||||||| ||||| Sbjct 5803 C--GGGGCGTACCGCTGTTGAACAGCGTGGG 5831 >seq564 Length=17261 Score = 181 bits (200), Expect = 2e-40 Identities = 299/428 (70%), Gaps = 15/428 (4%) Strand=Plus/Plus Query 42724 TCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGT 42783 ||||||| | |||||||| || | ||| | ||||| |||||| || || | || Sbjct 9148 TCGAGGGTGTTTTCTTCTCCGGGTCGTTCTGCAGCATCTACTGGCTGAAAAAGCGCGGGT 9207 Query 42784 CGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGG 42843 ||||||||| || || || || ||||| ||||||||| | ||||| ||||| || | | Sbjct 9208 TGATGCCCGGGCTGACGTTTTCCAACGAGCTCATCAGCCGCGACGAAGGGCTTCACCGTG 9267 Query 42844 ACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG--GT 42901 | || || ||||| ||| | ||| || | | |||| || || | || | || Sbjct 9268 ATTTCGCGTGCCTGTTGTAC---AGCTACTTGAACAACAAACCG--GACGTCGCCGTGGT 9322 Query 42902 CCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCT----CACGCAGTCGC 42957 | ||| | | ||| ||||||||||| || || |||||||| ||||| | Sbjct 9323 GAAGCAGATCGTGATGGAAGCCGTGGAGATTGAAAAAGAGTTCCTGTGCGACGCA----C 9378 Query 42958 TGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017 |||||||||||||||| ||||||||| | || || |||| | |||||| ||| ||||| Sbjct 9379 TGCCCGTGTCCCTGGTGGGCATGAACAAAGAGCTGATGTCGGACTACATCGAGTTCGTCG 9438 Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCG 43077 | || || | ||||||||| | || || |||||||| || ||| |||| Sbjct 9439 CGGATCACTTGCTGTGCCAGCTCGGGCTGGAAAAGGAATACAACACCGCGAACCCGTTCG 9498 Query 43078 ACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCG 43137 ||| |||||| ||||||| | | || || |||||||||||||| || ||||| | || Sbjct 9499 ACTGGATGGAGCTCATCTCGCTTCAAGGTAAAACCAACTTTTTCGAAAAACGCGTAGGCG 9558 Query 43138 ACTACCAG 43145 | |||||| Sbjct 9559 AGTACCAG 9566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944326581267440