Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq633 174 2e-38 seq151 127 2e-24 seq564 113 5e-20 seq19 87.8 2e-12 seq382 82.4 9e-11 >seq633 Length=11014 Score = 174 bits (192), Expect = 2e-38 Identities = 496/759 (65%), Gaps = 5/759 (1%) Strand=Plus/Plus Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 || || ||||| ||||| || || ||||| | ||| || ||| ||| |||| || Sbjct 5083 GGGAGCGCGATGGACGCGAGGTTGCACACCGCGGTTTCCTCCGGGGACGTGAACTCGATG 5142 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 || ||||| |||| || || | ||| || |||| ||||| || || || || | Sbjct 5143 ATCTCCGTGCACAGGTTCGACGACCGAATCGTACCCAGGTTCTGCTGGTTGGATTTGCGG 5202 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 || ||||| || ||| | |||||||| || | || || || ||| || | |||||| Sbjct 5203 TTGCACGCGTCTTTGAACAGCATGTAGGGGTTGCCGGTTTCTACTTGCGATTCGAGAATC 5262 Query 114644 GCCTTCCAGAC-ATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 114702 || ||| | | | ||| || | | || ||| || ||| | | |||||| Sbjct 5263 GCAAACCAAAGGAGCTGCGCCTTG-ATGGTCTTCTTGCCTTTGCCCGCTTTTTCGTACGC 5321 Query 114703 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 114762 ||||| |||| ||| | |||||| | || | |||||| || || | || Sbjct 5322 CGTGTACTTCTCTTCGAACGCCTCACCCCAGCAATCCGCGAGCCCGGGGCACTCGTTCGG 5381 Query 114763 GCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCA 114822 ||| | || | ||||| || ||| || | || |||||| ||||| | |||| Sbjct 5382 GCACATCAGCGTCCATTCGCCGTTTGACTCCACCCTCTGCATGAACAGGTCGTTGGTCCA 5441 Query 114823 GAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 114882 || | |||| || || || ||| |||||||| | || || || | ||| || Sbjct 5442 CAGGCCGTAGAAAAGGTCGCGCGCGCGCGCTTCTTCCTTGCCGTGGTTCTTCCTCAAATC 5501 Query 114883 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 | |||| | ||| || |||||||||||| ||||| | ||| | | ||||| || Sbjct 5502 GAGCCAGTCGAAGATGTCGCTGTGCCACGGTTCAAGGTAGATCGCAAACGCGCCCTTGCG 5561 Query 114943 ---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAAT 114999 | || | |||| || |||| ||| ||| | || || ||||| ||||| || | Sbjct 5562 CTTGCCCCCGCCTTGGTCCACGTACCGCGCGGTGTCGTTGAACACGCGCAGCATGGGGAC 5621 Query 115000 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATG 115059 ||| || | || ||| ||||| || || || ||| || ||| || || || Sbjct 5622 GATGCCGTTTGAGGTGCCGTTTGTGCCGCGGATGTACGACGCGGTGCCTCGGATGTCGTG 5681 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 |||| || ||| ||||| || || |||||||||| |||||||||| | || || | Sbjct 5682 GATGGACAGACCGATACCGCCGGCGGACTTTGAGATGCACGCGCACTCCTTCAGGGTGTC 5741 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 |||||| || ||||| ||||| |||| | ||||| |||||||| ||| | || || Sbjct 5742 GTAGATACCCTCGATGGAGTCCTCCTTCATGGCGATCAGGAAGCACGACGAGAGCTGCGG 5801 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 115218 | || ||||| |||||| || || || | |||||| Sbjct 5802 GCGGGGCGTACCGCTGTTGAACAGCGTGGGCGACGCGTG 5840 >seq151 Length=22738 Score = 127 bits (140), Expect = 2e-24 Identities = 504/778 (65%), Gaps = 29/778 (4%) Strand=Plus/Minus Query 10390 GAAGAATGTCACACCACCCGCGTCCCCTCGCGGAATGATTGAAACCTTTCGAACTGTGTC 10449 |||||| |||| || ||||||| ||||| || | ||| || | ||| ||| | ||| Sbjct 2573 GAAGAAGGTCAGTCCCCCCGCGTTGCCTCGAGGCACGATGGAGATCTTCGTAACCGGGTC 2514 Query 10450 GTACCCAGGTAAAGTAGCGCCGACGATGGCGTGCCCAGCTTCGTGATACGCCACGA---G 10506 |||| | || | |||||||| ||||||||||| |||||||| ||||| || | | Sbjct 2513 GTACTCGGGCATGAGCGCGCCGACAATGGCGTGCCCGGCTTCGTGGTACGCGACCAAACG 2454 Query 10507 TTCCTTCTTTCGTGGTGAGAACTTGGTGTCACCCTTGGCA---CCCACGATGATGCGTTG 10563 || ||||| | | | | || | | | |||| ||| ||| | | |||||| | Sbjct 2453 TTTCTTCTGCAG-GCTCATCACC--GCGCCTTCCTTCGCAGCACCCGCAACGATGCGCTC 2397 Query 10564 ATACACATTCTCAACGATATCATTCGTGATCGTCCCG---TCGCCGTCACGGACAGCGCG 10620 | | | | | | || || ||||| | | || ||| | || ||||| | Sbjct 2396 CAAGGCGTCCGCGATCTCCTCCTTACTGATCTCCGTGAGCTC-CCGCCTCG--CAGCGAG 2340 Query 10621 GATGGCACACTCATTGAGGAGGTTCGCCAAGTCGGCACCAGAGAAGCCCGTCGTTTGCTT 10680 |||||| || ||||| |||||| || |||| || || ||||| | ||| || Sbjct 2339 GATGGCGGCTTCGTTGAGAAGGTTCTGCAGCGCGGCGCCGGAAAAGCCGGGCGTGCGCCG 2280 Query 10681 TGCGATGGCGT-GTAGCTTCACATCGTCAGCCAACTTCTTGTCTCTGGCGTGGACACCCA 10739 |||| || ||| | ||| || | | | |||| ||| ||||| || || Sbjct 2279 CGCGACCTTGTCGTAA-TCCACGTCCTTGCCGATGGTCTTCCCTCGCGCGTGCACTTTCA 2221 Query 10740 AAATCTTC-TCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCGA 10798 ||| | || | ||||| || ||| ||| |||||||| || || || || ||| Sbjct 2220 GGATCCTGATCCTGCCCGCG-ACGTCGGGCAGGTCCACGGTGACCTGTCGGTCGAACCGA 2162 Query 10799 CCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAACG 10858 || || || | | ||| ||||| | ||| | |||||||||||| | || | Sbjct 2161 CCGGGCCGCAACAAGGCTGAATCAAGCACGTCAGGCCTGTTCGTCGCCGCCAGCACGATC 2102 Query 10859 ATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCG 10918 | || || | ||||| || |||||||| || || || || |||||||||||||| Sbjct 2101 ACCCCGGTGTTCCCTTCAAACCCGTCCATCTCGGTTAAAAGCTGGTTGATGGTTTGTTCC 2042 Query 10919 CGTTCATCATTCGCG-GGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTC 10977 || || || ||| || || | | || || | ||||||| || || ||||| || || Sbjct 2041 CGCTCGTCGTTCCCGCCGCCCATC-CCAGCCCCGCGTTGCCGCCCAACCGCGTCGATCTC 1983 Query 10978 ATCGATGAAAACGATACACGG----TTGATTTTCACGGGCAACTTCAAAGATATCTCGGA 11033 || ||||| ||||| || || ||| |||| || ||| || | ||| || | Sbjct 1982 GTCAATGAACACGATGCAAGGCGCCTTGGATTTC----GCCTTTTCGAACAAATCGCGAA 1927 Query 11034 CTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGGCGGAACATTGGATGA 11093 | | | || ||||| || || ||||| ||||| || | || ||||| ||| || | Sbjct 1926 CACGCGACGCCCCGACCCCGACGAACATCTCCACGAACTCGGAGGCGGCGCATGAGAAAA 1867 Query 11094 AGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCAGG 11151 | || ||| | ||| ||||| | |||| |||||| | ||||| || ||||| || Sbjct 1866 ACGGCACGCCCGCTTCGCCCGCCACGGCTTTGGCGAGCAAAGTCTTGCCGGTCCCCGG 1809 >seq564 Length=17261 Score = 113 bits (124), Expect = 5e-20 Identities = 234/338 (69%), Gaps = 14/338 (4%) Strand=Plus/Minus Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 |||||| |||| |||| ||||| || |||||| ||| |||||| || | ||| || Sbjct 9444 GATCCGCGACGAACTCGATGTAGTCCGACATCAGCTCTTTGTTCATGCCCACCAGGG-AC 9386 Query 125937 ATGGG-AGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATG-GC 125994 | ||| || ||||| | | |||| | || ||||| |||||||||||| |||||| || Sbjct 9385 ACGGGCAGTGCGTCGCACAGGAACTCTTTTTCAATCTCCACGGCTTCCATCACGATCTGC 9326 Query 125995 GTGA--ATGGTGTCCACCCCAGGTCTATTGCGCAA--AG-TCTTGAAGAGTTCCACGGCA 126049 | | | || | | || ||| | ||| ||| || | | || || |||| | Sbjct 9325 TTCACCACGGCGACGTCC---GGTTTGTTGTTCAAGTAGCTGTACAACAGG--CACGCGA 9271 Query 126050 AACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGC 126109 || || |||| || || ||||| ||| |||||| || || || || ||| || ||| Sbjct 9270 AA-TCACGGTGAAGCCCTTCGTCGCGGCTGATGAGCTCGTTGGAAAACGTCAGCCCGGGC 9212 Query 126110 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCC 126169 || | || ||||| |||| |||| | || || || || || |||||||| | ||| Sbjct 9211 ATCAACCCGCGCTTTTTCAGCCAGTAGATGCTGCAGAACGACCCGGAGAAGAAAACACCC 9152 Query 126170 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207 || | ||||||||||| | ||| ||||| || ||||| Sbjct 9151 TCGATGCACGCGAACGCGATGAGTCGCTCGGCGAAGGA 9114 >seq19 Length=40506 Score = 87.8 bits (96), Expect = 2e-12 Identities = 279/427 (65%), Gaps = 12/427 (3%) Strand=Plus/Plus Query 125777 TCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTTCTTT 125836 ||||||||||| | || || | | | ||| | ||||| ||||||| ||||| Sbjct 29383 TCGAAGAAGTTGGCTTTTCCTTGAAGGGAAATAGTTTCCATCCAATCAAACGGGTTTGGG 29442 Query 125837 GAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGACGTACTCAATG 125896 | |||||| | | | | | || | ||| || | ||||||| |||| |||| ||| Sbjct 29443 GTGTTCCATACCTTCGTCCCACCCAGCTGCACGATTAACCGATCCGCGACGAACTCGATG 29502 Query 125897 TACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAAGATG 125956 ||||| | |||| | | | |||||| || | || || | |||||||| | | Sbjct 29503 TACTCCGCCATCAGCCCCGCGTTCATCCCAACAAGCGCGCACGAAAGCGCGTCGCACACA 29562 Query 125957 AACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAA-----TGGTGTCCACCC 126011 ||| | || ||||| ||||| || || ||||||| | || | | || | || | Sbjct 29563 AACTCTTTTTCAATCTCCACCGCGTCTTTCACGATGTCCTGCAGTCTTTCGTTTTCAAGC 29622 Query 126012 CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCTTGGTGGAGACCCTCGT 126071 | || | ||| | | || | |||| | || || ||| | ||||||| Sbjct 29623 GGGTGCT--TCAGCATGCTGTACAACAAG--CACG-CGAAGTCGCAGTGCAAGCCCTCGT 29677 Query 126072 CACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACC 126131 | ||| ||| || || || || || ||| ||| |||||| || || || || | || Sbjct 29678 CTCGGCTGATCAGCTCGTTTGAAAACGTCAGGCCTTTCATGAGGCCTCGTTTTTTGAGCC 29737 Query 126132 AGAAAATCGCACAAAATGAACCCG-AGAAGAAGATTCCCTCCACACACGCGAACGCAAAG 126190 |||||||||| || || | |||| ||| || || |||||||| ||||||||||| | | Sbjct 29738 AGAAAATCGCGCAGAA-GCTCCCGCTGAAAAAAATCCCCTCCACGCACGCGAACGCGACG 29796 Query 126191 AGACGCT 126197 || |||| Sbjct 29797 AGGCGCT 29803 >seq382 Length=14395 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 124139 AAACTTGTTGTCAATGAACCAGATGGAACTGACATCAACAATGGCCATAGCCTTTTGTCC 124198 ||||||||| |||| |||||| || | ||||||||| || || | |||||||||||| Sbjct 3885 AAACTTGTTATCAAAGAACCAAATTTGATTGACATCAATGATAGCTAGAGCCTTTTGTCC 3944 Query 124199 CTTCTCGACACTGTCGAGGGGAACG 124223 |||||||| ||| ||||| | |||| Sbjct 3945 CTTCTCGATACTATCGAGAGAAACG 3969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597345617862520