Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq633 224 1e-53 >seq633 Length=11014 Score = 224 bits (248), Expect = 1e-53 Identities = 499/745 (67%), Gaps = 8/745 (1%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || || ||||||||| || || || || ||| | || ||||| |||||||| | Sbjct 5831 CCCACGCTGTTCAACAGCGGTACGCCCCGCCCGCAGCTCTCGTCGTGCTTCCTGATCGCC 5772 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| ||||||||| || || | ||||| ||| ||||| || ||| ||||||| Sbjct 5771 ATGAAGGAGGACTCCATCGAGGGTATCTACGACACCCTGAAGGAGTGCGCGTGCATCTCA 5712 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTG--TCCACGACGTACGTGCCAGGGGTTCCTACA 94075 || | ||| || || ||||| || || |||||||| | || | || | || |||| Sbjct 5711 AAGTCCGCCGGCGGTATCGG--TCTGTCCATCCACGACATCCGAGGCACCGCGTCGTACA 5654 Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135 ||||||| || || |||||||| |||||| ||||||| ||||| || || |||||| || Sbjct 5653 TCCGCGGCACAAACGGCACCTCAAACGGCATCGTCCCCATGCTGCGCGTGTTCAACGACA 5594 Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195 | ||||| ||||||||||| || || || | | | ||||| | || ||| |||| || | Sbjct 5593 CCGCGCGGTACGTGGACCAAGGCGGGGGCAAGCGCAAGGGCGCGTTTGCGATCTACCTTG 5534 Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255 | || |||||| ||| | | | |||| || | |||||||||||||| || Sbjct 5533 AACCGTGGCACAGCGACATCTTCGACTGGCTCGATTTGAGGAAGAACCACGGCAAGGAAG 5474 Query 94256 TGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCA--GACCTTTTTATGAAACG 94313 | | | || | ||||| ||||||| || ||| ||| ||||| || ||| | | Sbjct 5473 AAGCGCGCGCGCGCGACCTTTTCTACGGCCTGTGG--ACCAACGACCTGTTCATGCAGAG 5416 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || ||| |||| || |||| || | || || || || || ||||| || | || Sbjct 5415 GGTGGAGTCAAACGGCGAATGGACGCTGATGTGCCCGAACGAGTGCCCCGGGCTCGCGGA 5356 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || || | || ||||| ||| | |||||| |||||| | || Sbjct 5355 TTGCTGGGGTGAGGCGTTCGAAGAGAAGTACACGGCGTACGAAAAAGCGGGCAAAGGCAA 5296 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || | || | || ||| | ||| | || || || || || || Sbjct 5295 GAAGACCATCAAGGCGCAGCTCCTTTGGTTTGCGATTCTCGAATCGCAAGTAGAAACCGG 5236 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | |||||||| ||||||| ||| | |||| ||| |||||||||||| |||| || Sbjct 5235 CAACCCCTACATGCTGTTCAAAGACGCGTGCAACCGCAAATCCAACCAGCAGAACCTGGG 5176 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||| | ||||| |||||||| ||||| |||||| || || ||||| || | Sbjct 5175 TACGATTCGGTCGTCGAACCTGTGCACGGAGATCATCGAGTTCACGTCCCCGGAGGAAAC 5116 Query 94614 TGCTGTGTGTAACCTGGGCTCCATC 94638 || ||||| ||||| | |||||| Sbjct 5115 CGCGGTGTGCAACCTCGCGTCCATC 5091 Score = 174 bits (192), Expect = 2e-38 Identities = 467/705 (66%), Gaps = 23/705 (3%) Strand=Plus/Minus Query 94729 AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAG---GCGGAGAACTCA 94785 |||||||||||| | |||||| ||||| |||||| || |||| ||| | || Sbjct 4946 AACCTGAACAGGATCATCGACGTGAACTACTACCCAGT---GGAGACCGCGCGGCGTTCG 4890 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| || ||| || ||||||||| ||||||||||||| ||||||| | | | | || Sbjct 4889 AACATGCGGCACCGCCCCATCGGCCTCGGCGTCCAGGGCCTCGCGGATGTGTTCATCCTG 4830 Query 94846 ATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGC 94905 | | ||| ||| ||| || ||| ||| | | || | | || ||||||| Sbjct 4829 CTCGGCCTGGCCTTCGATTCCCCCGAAGCGCAGAAACTCAACGCGGAGATTTTCGAAACG 4770 Query 94906 ATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACAC 94965 || || | || || ||| ||||| | | | || | | || | |||| | || Sbjct 4769 ATCTACTTCGCCGCGCTGACGGAATCCAACGCCATAGC--GGT-GGTGGACGGGACGTAC 4713 Query 94966 GAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGT- 95024 ||| ||| | ||| ||||| | ||||||| | ||| || | ||||| || Sbjct 4712 GAAACGTACGCCGGGTCGCCTGTTTCCAAGGGCATCCTGCAGCCTGAAATGTGGGGCGTC 4653 Query 95025 -----GAAGCCCTC--GGGTCTGT-ACGACTGGGAAGCTCTACGCGCTGATGTTATCAAA 95076 || |||| ||| | | ||||||||| | ||| ||| | | | | | Sbjct 4652 ACGGTGATGCCCGGCGGGGACAGGCACGACTGGGTCGGTCTGCGCTCAAA-GATCGCGGC 4594 Query 95077 CA-CGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGAT 95135 | ||| ||| ||| |||| || ||||| ||||||||||| || || ||| |||| || Sbjct 4593 GAGCGGCGTGCGGAACTCGCTTCTCGTGGCTCCCATGCCCACCGCGTCGACGTCGCAAAT 4534 Query 95136 CCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCT 95195 ||| ||||||||||||| |||||||||| |||| |||| | ||| ||| |||||||| Sbjct 4533 CCTGGGCAACAACGAGTGCTTCGAACCCTACACCAGCAACATCTACGCCAGACGGGTGCT 4474 Query 95196 CGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGT 95255 |||| || ||| |||| | ||||| ||||| || ||| ||||| || || | Sbjct 4473 TTCCGGAGAGTTCACCGTGGTGAACAACCACCTTCTTTCGGATTTGACGGAACTAGGGTT 4414 Query 95256 GTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCC 95315 ||||| | |||||||| | || | | ||||||| ||| | | || Sbjct 4413 GTGGGACCCCTCACTCAAGAACGACCTCATCTCCAACAACGGCAGCGT---GCAAGGCCT 4357 Query 95316 GCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGT 95375 | | || || ||||| |||||||| | ||||| ||||||||||| ||| ||||||||| Sbjct 4356 GGACATCCCCGAGGAACTCAAGGCGATTTACAAAACCGTGTGGGAAATCAAGCAGCGCGT 4297 Query 95376 GATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAG 95420 | | | ||| || |||| ||| || | |||||| ||| || Sbjct 4296 GCTTGTGGACATGGCCGCCGACCGAGGCGCGTTCATCGACCAAAG 4252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494716589261240