Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq633 102 7e-17 >seq633 Length=11014 Score = 102 bits (112), Expect = 7e-17 Identities = 218/323 (67%), Gaps = 7/323 (2%) Strand=Plus/Minus Query 123009 ACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGT 123068 ||||||||| ||||| ||||| | ||| ||| || ||| | || ||||| Sbjct 5843 ACGCACGCGTCGCCCACGCTGTTCAACAGCGGTACGCCCCGCCCGCAGCTCTCGTCGTGC 5784 Query 123069 TTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGC 123128 || || || || || || ||| |||| |||||||| || || || || ||| Sbjct 5783 TTCCTGATCGCCATGAAGGAGGACTCCATCGAGGGTATCTACGACACCCTGAAGGAGTGC 5724 Query 123129 GCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGC 123188 |||| || || || | | |||||| || || || | | |||||| | ||||| | Sbjct 5723 GCGTGCATCTCAAAGTCCGCCGGCGGTATCGGTCTGTCCATCCACGACATCCGAGGCACC 5664 Query 123189 GGAAGCCG--CATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAG 123246 | | || |||| | |||| |||| | | | ||| ||| |||||||||| | Sbjct 5663 GC--GTCGTACATCCGCGGCACAAACGGCACCTCAAACGGCATCGTCCCCATGCTGCGCG 5606 Query 123247 TTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGG---CAAACGCAAAGGCGCGATGG 123303 | | ||| || ||| |||| |||| ||||| ||||| ||| ||||| |||||| | | Sbjct 5605 TGTTCAACGACACCGCGCGGTACGTGGACCAAGGCGGGGGCAAGCGCAAGGGCGCGTTTG 5546 Query 123304 CGATCTATCTAGAACCGTGGCAC 123326 ||||||| || |||||||||||| Sbjct 5545 CGATCTACCTTGAACCGTGGCAC 5523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451997160107240