Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq520 134 3e-26 seq648 104 6e-17 seq247 104 6e-17 >seq520 Length=32656 Score = 134 bits (148), Expect = 3e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | |||||| ||||| || || || ||||| |||| |||||| || || | || Sbjct 23573 CGAAGGCGCAGGACGAGGTGCAGGGTGGATTCCTTCTGGATGTTGTAATCCGCGAGGGTG 23632 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| || ||||||||||||||||||||||| || ||| ||| Sbjct 23633 CGGCCGTCCTCAAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCT 23692 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || |||| Sbjct 23693 TCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGG 23752 Query 199589 GTGATCGTCTTACCCGTGA 199607 ||||| ||||||||||||| Sbjct 23753 GTGATGGTCTTACCCGTGA 23771 >seq648 Length=41169 Score = 104 bits (114), Expect = 6e-17 Identities = 149/209 (71%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||| ||| || || ||| | |||| ||||||||| ||||| || | | ||| Sbjct 13554 AGCACCAGGTCGAGCGTGGATTCCATCTGGATGTTGTAGTCCGCCAACGTGCGGACGTCT 13495 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||| | || |||||||||||||||| ||| | || | ||||| | ||| Sbjct 13494 TCGAGCTGCCTGCCCACGAAGATGAGACGCTGGTGG-CGGGGGGTAAGCCTTCCCTGTCC 13436 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 13435 TGGATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCAACCTCCAGGGTGATGGTC 13376 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || ||||| || || || Sbjct 13375 TTGCCAGTCAACGTCTTCACGAAGATCTG 13347 >seq247 Length=13427 Score = 104 bits (114), Expect = 6e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || || ||||| |||| |||||| || || | || | ||||| Sbjct 6240 AGCACCAGGTGAAGCGTGGATTCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCC 6181 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||| ||||| ||||||||||| || || || || ||| Sbjct 6180 TCAAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCC 6121 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || || || ||||||| |||| |||||| | | || || || | ||||| ||| Sbjct 6120 TGGATTTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 6061 Query 199598 TTACCCGTGA 199607 |||||||||| Sbjct 6060 TTACCCGTGA 6051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178905452826623