Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq520 104 3e-17 seq247 89.7 6e-13 >seq520 Length=32656 Score = 104 bits (114), Expect = 3e-17 Identities = 132/178 (74%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| || | || ||||| |||| || ||||||||||| ||||| Sbjct 23603 TCCTTCTGGATGTTGTAATCCGCGAGGGTGCGGCCGTCCTCAAGCTGCTTGCCCGCGAAG 23662 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||||| || | || ||||||||| |||||| ||||| ||| Sbjct 23663 ATGAGACGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGA-CGTT 23721 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT--CAGCGTTT 46577 | | | ||||| || ||||| |||| |||||||| || ||||| | |||||| Sbjct 23722 GTCGATGGTGTCCGAAGACTCCACCTCCAGGGTGATGGTCTTACCCGTGACTGCGTTT 23779 >seq247 Length=13427 Score = 89.7 bits (98), Expect = 6e-13 Identities = 122/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||| || | || ||||| | || || ||||||||||| ||||| Sbjct 6219 TCCTTCTGGATGTTGTAATCCGCGAGCGTGCGGCCATCCTCAAGCTGCTTGCCCGCGAAA 6160 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||||||| | || | | |||||||||| ||| ||| ||| | ||| Sbjct 6159 ATGAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTGTCCTGGATTTTCGCCTTCA-CGTT 6101 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | ||||| || ||||| || | |||||||| || ||||| Sbjct 6100 GTCGATGGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTACCCGT 6053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565230847001880