Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq151 127 3e-24 seq564 98.7 1e-15 >seq151 Length=22738 Score = 127 bits (140), Expect = 3e-24 Identities = 200/284 (70%), Gaps = 12/284 (4%) Strand=Plus/Minus Query 15972 TCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 16031 ||||| || |||||||| || ||||||||||| || ||||||||||| || || ||| | Sbjct 2086 TCAAACCCGTCCATCTCGGTTAAAAGCTGGTTGATGGTTTGTTCCCGCTCGTCGTTCCC- 2028 Query 16032 GGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGA 16089 || ||| ||||| | ||||||| || || || || ||||| |||||||| |||| Sbjct 2027 -GCCGCCCATCCCAGCCCCGCGTTGCCGCCCAACCGCGTCGATCTCGTCAATGAACACGA 1969 Query 16090 TGCATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 16145 |||| || ||| |||| || ||| || | ||| || |||||| || || Sbjct 1968 TGCAAGGCGCCTTGGATTTC----GCCTTTTCGAACAAATCGCGAACACGCGACGCCCCG 1913 Query 16146 ACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGAT 16205 || || || ||||||||||| || | | ||||| ||| || || || || | | Sbjct 1912 ACCCCGACGAACATCTCCACGAACTCGGAGGCGGCGCATGAGAAAAACGGCACGCCCGCT 1853 Query 16206 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 || ||||| | |||| |||||| | |||||| || || || || Sbjct 1852 TCGCCCGCCACGGCTTTGGCGAGCAAAGTCTTGCCGGTCCCCGG 1809 >seq564 Length=17261 Score = 98.7 bits (108), Expect = 1e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 ||||| || ||||||||| |||| || ||||| | |||||| | |||||||| || || Sbjct 9114 TCCTTCGCCGAGCGACTCATCGCGTTCGCGTGCATCGAGGGTGTTTTCTTCTCCGGGTCG 9173 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 |||||| || || ||||| || ||||| || | ||||| || || || |||||| Sbjct 9174 TTCTGCAGCATCTACTGGCTGAAAAAGCGCGGGTTGATGCCCGGGCTGACGTTTTCCAAC 9233 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 ||||| ||| || ||||| || || |||| || || ||| Sbjct 9234 GAGCTCATCAGCCGCGACGAAGGGCTTCACCGTGATTTCGCG 9275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734105329680