Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq633 109 6e-19 seq151 98.7 1e-15 >seq633 Length=11014 Score = 109 bits (120), Expect = 6e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 109701 AACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTT 109760 || ||| || ||||| |||||| || || || | ||| |||| | ||||||||| Sbjct 4437 AAGAAGGTGGTTGTTCACCACGGTGAACTCTCCGGAAAGCACCCGTCTGGCGTAGATGTT 4496 Query 109761 AGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGG 109820 | |||||||||||||| ||||| |||||||| |||||||| | || || || ||||| Sbjct 4497 GCTGGTGTAGGGTTCGAAGCACTCGTTGTTGCCCAGGATTTGCGACGTCGACGCGGTGGG 4556 Query 109821 CATGGGAGCCATGAGAAG 109838 ||||||||||| |||||| Sbjct 4557 CATGGGAGCCACGAGAAG 4574 Score = 91.5 bits (100), Expect = 2e-13 Identities = 395/619 (64%), Gaps = 8/619 (1%) Strand=Plus/Plus Query 110607 CTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCG-AGAAAAGGTCACGGCAAC 110665 ||| ||||||| |||||||||||| |||||| |||| |||||||||| || | Sbjct 5409 CTCCACCCTCTGCATGAACAGGTCGTTGGTCCACAG-GCCGTAGAAAAGGTCGCGCGCGC 5467 Query 110666 GAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCC 110725 | || ||||| | || ||||| | | || | |||| | ||| || ||||| Sbjct 5468 GCGCTTCTTCCTTGCCGTGGTTCTTCCTCAAATCGAGCCAGTCGAAGATGTCGCTGTGCC 5527 Query 110726 ATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGACCC--GCCT-GGTTAACATAGC 110782 | ||||| || |||| || | | ||||| || ||| |||| ||| || || | Sbjct 5528 ACGGTTCAAGGTAGATCGCAAACGCGCCCTTGCGCTTGCCCCCGCCTTGGTCCACGTACC 5587 Query 110783 GTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTAC 110842 | || ||| | ||||| || | ||||| || | || || | || || ||||| | Sbjct 5588 GCGCGGTGTCGTTGAACACGCGCAGCATGGGGACGATGCCGTTTGAGGTGCCGTTTGTGC 5647 Query 110843 CCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCC 110902 | | || ||| || | || ||||||||||| || ||| ||||| || || Sbjct 5648 CGCGGATGTACGACGCGGTGCCTCGGATGTCGTGGATGGACAGACCGATACCGCCGGCGG 5707 Query 110903 ACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCT 110962 |||| || || ||||| | || || | || ||||| || || || || ||| Sbjct 5708 ACTTTGAGATGCACGCGCACTCCTTCAGGGTGTCGTAGATACCCTCGATGGAGTCCTCCT 5767 Query 110963 TGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTG 111022 | |||| || || ||||| || || | ||| || || ||||| || ||||| || | Sbjct 5768 TCATGGCGATCAGGAAGCACGACGAGAGCTGCGGGCGGGGCGTACCGCTGTTGAACAGCG 5827 Query 111023 TAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGG 111082 | || | ||| || | | | | | | | | ||| ||| || |||| ||| Sbjct 5828 TGGGCGACGCGTGCGTCATCCAGCGCTCGCTGAGCATGTGGTACGTATCGATGGCGTTCT 5887 Query 111083 GTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGA 111142 ||||| || ||| || || |||| || ||||||| || | || ||| ||| | Sbjct 5888 CCACATCCTT---GTGGATGCCGATGGAGACGCGCATGAGCAGGTGCTGGGGCCGTTCCA 5944 Query 111143 TTAGCTTTCCATCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATC 111202 | || || |||| ||| | ||||| | |||| ||||| ||| || ||||| Sbjct 5945 CGATTTTGCCGTCAAGGCGCAGCAGGTACGACCTCTCCAGGGTTTTGTACCCGAAGTAGT 6004 Query 111203 CAAAATCGAAATCACGATC 111221 | ||||||| || || || Sbjct 6005 CGTAATCGAAGTCGCGGTC 6023 >seq151 Length=22738 Score = 98.7 bits (108), Expect = 1e-15 Identities = 265/397 (67%), Gaps = 10/397 (3%) Strand=Plus/Minus Query 11590 TCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTT---G 11646 || || |||||||| || || | |||||||||||| || ||||| ||||| ||||| | Sbjct 2086 TCAAACCCGTCCATCTCGGTTAAAAGCTGGTTGATGGTTTGTTCCCGCTCGTCGTTCCCG 2027 Query 11647 GAGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706 | ||| ||| | ||| || | | || || ||||| ||||| || ||||| ||| Sbjct 2026 CCGCCCATCCCAGCC-CCG--CGTTGCCGCCCAACCGCGTCGATCTCGTCAATGAACACG 1970 Query 11707 ATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACA 11766 || || || |||| |||| |||||| | || || |||||| ||| || || Sbjct 1969 ATGCAAGGCGCCTTGGATTTCGCCTTTTCGAACAAATCGCGAACACGCGACGCCCCGACC 1910 Query 11767 CCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTC 11825 || ||||||||||| ||||| | | ||| | || ||| | || || || | || Sbjct 1909 CCGACGAACATCTCCACGAACTCGGAGGCGGCGCA-TGAGAAAAACGGCACGCCCGCTTC 1851 Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACC-AGCGAGAAGGG 11884 || || | |||| ||||| | |||||| || || || || | || | | | ||| Sbjct 1850 GCCCGCCACGGCTTTGGCGAGCAAAGTCTTGCCGGTCCCCGGGGGTCCGACCAACAAGCA 1791 Query 11885 CGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCA 11944 | || |||||||| || ||| | ||| || || ||||| ||||| |||| Sbjct 1790 C-CCTTTCGGGATCTTAGCGCCAAGCGCGGTGTACTTATCGGGGTTCTTCAGGAAATCCA 1732 Query 11945 CAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACC 11981 ||| ||||| || ||| ||| ||| ||| | ||| Sbjct 1731 CAACCTCCTGCAGCTCCAACTTCGCGCCGTCCACACC 1695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968129808200