Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq633 138 1e-27 seq151 114 2e-20 seq564 93.3 5e-14 seq189 89.7 6e-13 >seq633 Length=11014 Score = 138 bits (152), Expect = 1e-27 Identities = 617/965 (64%), Gaps = 22/965 (2%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || || ||||| || || | ||||| || || || || ||| ||| |||| | Sbjct 5083 GGGAGCGCGATGGACGCGAGGTTGCACACCGCGGTTTCCTCCGGGGACGTGAACTCGATG 5142 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| ||| || | |||||| |||| |||| ||||| || | Sbjct 5143 ATCTCCGTGCACAGGTTCGACGACCGAATCGTACCCAGGTTCTGCTGGTTGGATTTGCGG 5202 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 |||||||| || ||| | ||||||||||| | || || || || || | |||||| Sbjct 5203 TTGCACGCGTCTTTGAACAGCATGTAGGGGTTGCCGGTTTCTACTTGCGATTCGAGAATC 5262 Query 106637 GCCTTCCACAC-ATCGGCGGCTGGTACAATGGCGTTG--GCCCGT-CCCTCCGCCTCGTA 106692 || ||| | | | ||| || | |||| || ||| | ||| | ||||| Sbjct 5263 GCAAACCAAAGGAGCTGCGCCTTG----ATGGTCTTCTTGCCTTTGCCCGCTTTTTCGTA 5318 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCG-TCGGAGAGACCTGGTGCCTTGT 106751 | ||||| |||| ||| |||||||| | || || | ||| || || || || Sbjct 5319 CGCCGTGTACTTCTCTTCGAACGCCTCACCC-CAGCAATCCGCGAGCCCGGGGCACTCGT 5377 Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTC--TGG 106809 || || | || | ||||| || ||| |||| || |||||| ||||| ||| Sbjct 5378 TCGGGCACATCAGCGTCCATTCGCCGTTTGACTCCACCCTCTGCATGAACAGGTCGTTGG 5437 Query 106810 AATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCG 106869 |||||||| | || || || | || || ||||| | || ||||| | Sbjct 5438 --TCCACAGGCCGTAGAAAAGGTCGCGCGCGCGCGCTTCTTCCTTGCCGTGGTTCTTCCT 5495 Query 106870 TAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC 106929 || || || | || | ||| || |||||| || ||||| |||| || | | || Sbjct 5496 CAAATCGAGCCAGTCGAAGATGTCGCTGTGCCACGGTTCAAGGTAGATCGCAAACGCGCC 5555 Query 106930 CTTTCGA---CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 ||| || | ||| |||| | || || ||||| ||| |||| || ||||| ||||| Sbjct 5556 CTTGCGCTTGCCCCCGCCTTGGTCCACGTACCGCGCGGTGTCGTTGAACACGCGCAGCAT 5615 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 || | || || | ||| || ||||| || || || || || ||| | Sbjct 5616 GGGGACGATGCCGTTTGAGGTGCCGTTTGTGCCGCGGATGTACGACGCGGTGCCTCGGAT 5675 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 || |||||| || || ||||| || || |||||||||| ||| |||||| | || Sbjct 5676 GTCGTGGATGGACAGACCGATACCGCCGGCGGACTTTGAGATGCACGCGCACTCCTTCAG 5735 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 || | |||||||| | ||| ||||||||||| ||||||| |||||||| || | Sbjct 5736 GGTGTCGTAGATACCCTCGATGGAGTCCTCCTTCATGGCGATCAGGAAGCACGACGAGAG 5795 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 |||||| | || ||||| ||||| || || || | ||||| | | | | | Sbjct 5796 CTGCGGGCGGGGCGTACCGCTGTTGAACAGCGTGGGCGACGCGTGCGTCATCCAGCGCTC 5855 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 | | | ||| ||| || || | | | || | | ||| |||||||||||||| Sbjct 5856 GCTGAGCATGTGGTACGTATCGATGGCGTTCTCCA---CATCCTTGTGGATGCCGATGGA 5912 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATA 107346 || ||||| | || || ||||| ||||| || |||| || || || | || || Sbjct 5913 GACGCGCATGAGCAGGTGCTGGGGCCGTTCCACGATTTTGCCGTCAAGGCGCAGCAGGTA 5972 Query 107347 GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCCGCTTCGTA-TCAA 107405 | |||| ||||||||| || ||||| | |||| |||| || ||||| ||| Sbjct 5973 CGACCTCTCCAGGGTTTTGTACCCGAAGTAGTCGTAATCGAAGTCGCG-GTCGTACACAA 6031 Query 107406 TATCG 107410 | ||| Sbjct 6032 TCTCG 6036 >seq151 Length=22738 Score = 114 bits (126), Expect = 2e-20 Identities = 250/369 (68%), Gaps = 14/369 (4%) Strand=Plus/Minus Query 9279 TCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 9338 ||||| || |||||||| || ||||| ||||| || ||||||||||| || || ||| | Sbjct 2086 TCAAACCCGTCCATCTCGGTTAAAAGCTGGTTGATGGTTTGTTCCCGCTCGTCGTTCCC- 2028 Query 9339 GGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAA 9396 || ||| ||||| | ||||||| || || || || ||||| |||||||| || | Sbjct 2027 -GCCGCCCATCCCAGCCCCGCGTTGCCGCCCAACCGCGTCGATCTCGTCAATGAACACGA 1969 Query 9397 TACATGG----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCC 9452 | || || ||| |||| || |||| || | ||||||||| | || || Sbjct 1968 TGCAAGGCGCCTTGGATTTC----GCCTTTTCGAACAAATCGCGAACACGCGACGCCCCG 1913 Query 9453 ACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGAT 9512 || || || ||||||||||| || | | ||||| ||| || || || || | | Sbjct 1912 ACCCCGACGAACATCTCCACGAACTCGGAGGCGGCGCATGAGAAAAACGGCACGCCCGCT 1853 Query 9513 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 9572 || ||||| | |||| |||||| | |||||| || || || || || | | | Sbjct 1852 TCGCCCGCCACGGCTTTGGCGAGCAAAGTCTTGCCGGTCCCCGGGGGTCCGACCAACA-A 1794 Query 9573 GCACCCCGT-GGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATC 9631 |||||| | || ||||| |||||| | ||| | || || | ||| || ||||| Sbjct 1793 GCACCCTTTCGGGATCTTAGCGCCAAGCGCGGTGTACTTATCGGGGTTCTTCAGGAAATC 1734 Query 9632 CACAATCTC 9640 ||||| ||| Sbjct 1733 CACAACCTC 1725 >seq564 Length=17261 Score = 93.3 bits (102), Expect = 5e-14 Identities = 230/340 (68%), Gaps = 18/340 (5%) Strand=Plus/Minus Query 117104 GATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTAC 117163 |||||| || |||| ||||| || |||||| ||| |||||| || | || || Sbjct 9444 GATCCGCGACGAACTCGATGTAGTCCGACATCAGCTCTTTGTTCATGCCCACCAGGG-AC 9386 Query 117164 ATGGG-AGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG-GC 117221 | ||| |||||||| | | |||| |||| |||||||| || || || ||||||| || Sbjct 9385 ACGGGCAGTGCGTCGCACAGGAACTCTTTTTCAATCTCCACGGCTTCCATCACGATCTGC 9326 Query 117222 GT------GGATAGTTTCGGTA-GTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGG 117274 | || | | |||| || | || | || || | | || || |||| Sbjct 9325 TTCACCACGGCGACGTCCGGTTTGTTGTTCAAGTA-GC----TGTACAACAGG--CACGC 9273 Query 117275 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTG 117334 ||| || |||| || || || || ||| || || || || || || || || | Sbjct 9272 GAAA-TCACGGTGAAGCCCTTCGTCGCGGCTGATGAGCTCGTTGGAAAACGTCAGCCCGG 9214 Query 117335 GCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATAC 117394 |||| | || ||||| |||| ||| || || |||||| |||||||||||||| | || Sbjct 9213 GCATCAACCCGCGCTTTTTCAGCCAGTAGATGCTGCAGAACGACCCGGAGAAGAAAACAC 9154 Query 117395 CCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGA 117434 |||| | ||||| ||||| | || |||||||||||||| Sbjct 9153 CCTCGATGCACGCGAACGCGATGAGTCGCTCGGCGAAGGA 9114 >seq189 Length=62474 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Minus Query 178205 TGGGATCCAGACGATCAGCGTCGTATTAACGAAAATAAAAATTGGAGA-GCTGGTGACCC 178263 ||||| || ||||| ||||| | ||| ||||||| ||| | ||| || || | ||||| Sbjct 58718 TGGGACCCGGACGAACAGCGCAGGATTGACGAAAACAAACAATGGCGACGCACG-GACCC 58660 Query 178264 CGAAGAAGATGCGTGGGATATAGACAAAGAGCGTGACGCAGCGAGATACAAACGGGAATC 178323 | |||||||||||||| || |||||||| || || || | || |||||||| || || Sbjct 58659 TGCTGAAGATGCGTGGGACATCGACAAAGAACGCGATGCGGTGATGTACAAACGCGAGTC 58600 Query 178324 GTTGGA 178329 |||||| Sbjct 58599 GTTGGA 58594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589972916381560