Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq633 154 2e-32 seq151 95.1 1e-14 seq57 95.1 1e-14 seq564 93.3 5e-14 seq189 89.7 6e-13 >seq633 Length=11014 Score = 154 bits (170), Expect = 2e-32 Identities = 619/962 (64%), Gaps = 16/962 (2%) Strand=Plus/Minus Query 75112 CGATATTGA-TACGAAGCGGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGA 75170 ||| |||| ||||| || |||| |||| | ||||| || ||||||||| |||| Sbjct 6036 CGAGATTGTGTACGAC-CGCGACTTCGATTACGACTACTTCGGGTACAAAACCCTGGAGA 5978 Query 75171 AGAGCTATCTTCAACGGCTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGC 75230 | || || | || || || |||| || ||||| || ||| || || |||||| Sbjct 5977 GGTCGTACCTGCTGCGCCTTGACGGCAAAATCGTGGAACGGCCCCAGCACCTGCTCATGC 5918 Query 75231 GGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGA 75290 | ||| | |||||||||||| ||| | | || | | | || || ||| ||| | Sbjct 5917 GCGTCTCCATCGGCATCCACAAGGATG---TGGAGAACGCCATCGATACGTACCACATGC 5861 Query 75291 TGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGAC 75350 | | | | | | | ||||| | || || || ||||| ||||| || | | Sbjct 5860 TCAGCGAGCGCTGGATGACGCACGCGTCGCCCACGCTGTTCAACAGCGGTACGCCCCGCC 5801 Query 75351 CGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATG 75410 ||||| | || |||||||| ||||||| ||||||||||| ||| | |||||||| | Sbjct 5800 CGCAGCTCTCGTCGTGCTTCCTGATCGCCATGAAGGAGGACTCCATCGAGGGTATCTACG 5741 Query 75411 GAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCC 75470 || || | |||||| ||| |||||||||| || || ||||| || || ||||| Sbjct 5740 ACACCCTGAAGGAGTGCGCGTGCATCTCAAAGTCCGCCGGCGGTATCGGTCTGTCCATCC 5681 Query 75471 ATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTA 75530 | || | ||| || || || || || ||||| || ||| | || || Sbjct 5680 ACGACATCCGAGGCACCGCGTCGTACATCCGCGGCACAAACGGCACCTCAAACGGCATCG 5621 Query 75531 TTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA-GCGGGG--CGTC 75587 | || ||||| ||||| || |||| ||| ||||| || || | ||| |||||| | Sbjct 5620 TCCCCATGCTGCGCGTGTTCAACGACACCGCGCGGTACGTGGACCAAGGCGGGGGCAAGC 5561 Query 75588 GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTG 75647 ||||||| | | ||| ||||| | ||||| ||||| ||| ||| | || | || | Sbjct 5560 GCAAGGGCGCGTTTGCGATCTACCTTGAACCGTGGCACAGCGACATCTTCGACTGGCTCG 5501 Query 75648 AGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGT 75707 | || | ||||| || | ||||| || || | || || || | ||||| Sbjct 5500 ATTTGAGGAAGAACCACGGCAAGGAAGAAGCGCGCGCGCGCGACCTTTTCTACGGCCTGT 5441 Query 75708 GGATTCCA--GACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTG 75765 ||| ||| ||||| |||||| || |||| ||| || ||||| | || | || Sbjct 5440 GGA--CCAACGACCTGTTCATGCAGAGGGTGGAGTCAAACGGCGAATGGACGCTGATGTG 5383 Query 75766 TCCAGACAAGGCACCAGGTCTCTCCGA-CGCGGTGGGTGAGGAGTTTGAAGCCCTCTACA 75824 || || || || || ||| | || || | |||||||| ||| |||| |||| Sbjct 5382 CCCGAACGAGTGCCCCGGGCTCGCGGATTGCTG-GGGTGAGGCGTTCGAAGAGAAGTACA 5324 Query 75825 CAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGAT-GTTTGGAAG 75883 | ||| ||| | | ||| | || ||| ||| | | || ||| | | ||||| Sbjct 5323 CGGCGTACGAAAAAGCGGGCAAAGGCAAGAAGACCAT-CAAGGCGCAGCTCCTTTGGTTT 5265 Query 75884 GCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGT 75943 || |||||| |||| || || || || | || || ||||| | ||| || || || Sbjct 5264 GCGATTCTCGAATCGCAAGTAGAAACCGGCAACCCCTACATGCTGTTCAAAGACGCGTGC 5205 Query 75944 AACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAA 76003 ||| || ||||| |||| |||| || || | || || || |||||||| Sbjct 5204 AACCGCAAATCCAACCAGCAGAACCTGGGTACGATTCGGTCGTCGAACCTGTGCACGGAG 5145 Query 76004 ATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTT 76063 || | |||| ||| ||| || || || || ||||| | || || ||||| || Sbjct 5144 ATCATCGAGTTCACGTCCCCGGAGGAAACCGCGGTGTGCAACCTCGCGTCCATCGCGCTC 5085 Query 76064 CC 76065 || Sbjct 5084 CC 5083 >seq151 Length=22738 Score = 95.1 bits (104), Expect = 1e-14 Identities = 193/284 (68%), Gaps = 12/284 (4%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || || || || ||||| | |||||| |||| | ||||| ||| | || || || Sbjct 1809 CCGGGGACCGGCAAGACTTTGCTCGCCAAAGCCGTGGCGGGCGAAGCGGGCGTGCCGTTT 1868 Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434 || ||| | ||| | | || ||||||||||| || || || || || | ||| Sbjct 1869 TTCTCATGCGCCGCCTCCGAGTTCGTGGAGATGTTCGTCGGGGTCGGGGCGTCGCGTGTT 1928 Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAA----CCATGTATTGTCTTCATTGATGA 175490 |||||| | || |||| || |||| ||| || || || || |||||||| || Sbjct 1929 CGCGATTTGTTCGAAAAGGC----GAAATCCAAGGCGCCTTGCATCGTGTTCATTGACGA 1984 Query 175491 GATTGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGGTATGCCAGCAAATGACGAGAGA 175548 ||| || ||||| || ||||||| | ||||| ||| || | || |||||| | Sbjct 1985 GATCGACGCGGTTGGGCGGCAACGCGGGGCTGGGATGGGCGGCGGG--AACGACGAGCGG 2042 Query 175549 GAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGA 175592 |||||||| || || || || | ||||||||||| || ||||| Sbjct 2043 GAACAAACCATCAACCAGCTTTTAACCGAGATGGACGGGTTTGA 2086 >seq57 Length=24908 Score = 95.1 bits (104), Expect = 1e-14 Identities = 276/419 (66%), Gaps = 6/419 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || |||||| | ||| |||| || |||| ||| ||| ||||| || || ||||| Sbjct 7851 GGCGCCAAGGTGCCCAAGGGCGTGCTCCTCGTGGGCCCGCCCGGTACCGGCAAAACCCTG 7792 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTGCTCTGCCGCAAAC 175395 ||||| |||||||||||| ||| | ||| || || || ||| | | | Sbjct 7791 CTCGCGAAAGCCATCGCGGGCGAAGCCGGTGTGCCTTTTTTCTCCATCTCCGGGTCGGAG 7732 Query 175396 TTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGCC 175455 ||||| |||||||| || || || || || | |||| || ||| | || ||| ||| Sbjct 7731 TTTGTTGAGATGTTCGTCGGGGTCGGCGCATCACGGGTCCGGGATTTGTTCAAAAAAGCC 7672 Query 175456 CGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAAGCAACGC 175515 ||||| || || ||| | ||| | || || || ||||| |||||| || ||| Sbjct 7671 AAGGAAAACGCGCCGTGCATTATTTTCGTCGACGAAATCGATGCCGTGGGCC-GCT-CGC 7614 Query 175516 AGCGCTGGTGGTAT-GCCAGCA--AATGACGAGAGAGAACAAACAATTAATCAACTACTC 175572 ||| | || || | | || || |||||||| |||||||| | || || || || Sbjct 7613 -GCGGTACCGGCATCGGCGGCGGCAACGACGAGAGGGAACAAACCCTGAACCAGCTCCTG 7555 Query 175573 ACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCGC 175632 ||||||||||| || || || | || ||| | | || | ||||| || || | Sbjct 7554 ACCGAGATGGACGGTTTCGAAGGCAACACCGGCGTGATCGTCGTGGCGGCGACGAACAGG 7495 Query 175633 GTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGATCCAAGT 175691 | |||||| || || |||||| || | || || || || || ||| | | ||||| Sbjct 7494 GCGGATATTCTGGACCCCGCCCTTCTAAGGCCCGGCCGCTTCGACCGCCAAGTGCAAGT 7436 >seq564 Length=17261 Score = 93.3 bits (102), Expect = 5e-14 Identities = 230/340 (68%), Gaps = 18/340 (5%) Strand=Plus/Plus Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 |||||||||||||| || | ||||| ||||| | |||||| | |||||||||||||| Sbjct 9114 TCCTTCGCCGAGCGACTCATCGCGTTCGCGTGCATCGAGGGTGTTTTCTTCTCCGGGTCG 9173 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 |||||| || || ||| |||| ||||| || | ||||| || || || || || Sbjct 9174 TTCTGCAGCATCTACTGGCTGAAAAAGCGCGGGTTGATGCCCGGGCTGACGTTTTCCAAC 9233 Query 65188 GAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACT 65247 || || || ||| || || || || |||| || ||| |||| || || | | Sbjct 9234 GAGCTCATCAGCCGCGACGAAGGGCTTCACCGTGA-TTTCGCGTG--CCTGTTGTACA-- 9288 Query 65248 TTGCGTAATAGACCCAC-TACCGAAACTATCC------ACGC-CATCGTGAAAGAGGCGG 65299 || || | || | || |||| | | || | || ||||||| || || | Sbjct 9289 --GC-TACTTGAACAACAAACCGGACGTCGCCGTGGTGAAGCAGATCGTGATGGAAGCCG 9345 Query 65300 TTGAGATTGAGAAAGGGTTCATCTTGGACGCACT-CCCATGTAATCTCATCGGTATGAAC 65358 | |||||||| |||| |||| | | |||||||| ||| ||| || | || |||||| Sbjct 9346 TGGAGATTGAAAAAGAGTTCCTGTGCGACGCACTGCCCGTGT-CCCTGGTGGGCATGAAC 9404 Query 65359 TCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATC 65398 ||| |||||| || ||||| |||| || |||||| Sbjct 9405 AAAGAGCTGATGTCGGACTACATCGAGTTCGTCGCGGATC 9444 >seq189 Length=62474 Score = 89.7 bits (98), Expect = 6e-13 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 4743 TCCAACGATTCCCGTTTGTATCTCGCTGCGTCACGCTCTTTGTCTATATCCCACGCATCT 4802 |||||||| || |||||||| || | || || || |||||||| || |||||||||||| Sbjct 58594 TCCAACGACTCGCGTTTGTACATCACCGCATCGCGTTCTTTGTCGATGTCCCACGCATCT 58653 Query 4803 TCTTCGGGGTCACCAGC-TCTCCAATTTTTATTTTCGTTAATACGACGCTGATCGTCTGG 4861 || | ||||| | || || ||| | ||| ||||||| ||| | ||||| ||||| || Sbjct 58654 TCAGCAGGGTC-CGTGCGTCGCCATTGTTTGTTTTCGTCAATCCTGCGCTGTTCGTCCGG 58712 Query 4862 ATCCCA 4867 ||||| Sbjct 58713 GTCCCA 58718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596561628338720