Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq96 491 6e-134 seq520 168 9e-37 seq247 143 4e-29 seq648 114 2e-20 >seq96 Length=7150 Score = 491 bits (544), Expect = 6e-134 Identities = 1036/1533 (68%), Gaps = 19/1533 (1%) Strand=Plus/Minus Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| |||| |||||||| || || || || |||||||| || || || Sbjct 6449 GTCGAGATCATCGCGAACGACCAAGGCGCGCGCACGACGCCTTCGTACGTCGCGTTCACC 6390 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 ||| || || ||| | || || ||||| || || || || || |||||||| ||||| Sbjct 6389 GATTCCGAGCGCCTCATCGGGGACGCCGCTAAGAACCAAACCGCGATGAACCCGATCAAC 6330 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || ||||||||||| | || || | ||||| || | || || | Sbjct 6329 ACCGTTTTCGACGCGAAGCGGTTGATCGGCAGGAAGTTCAGCGACCCCCAGGTTCAGGCA 6270 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGG-TGTGGCTGATAAGCCTATGATTAA 195597 || || ||||||||| ||| | ||| |||| ||| || || || || || ||||| | Sbjct 6269 GACATCAAGGACTGGCCTT-TCAAGGTGTTGTCGGGTGAAGCCGAGAAACCCATGATCAG 6211 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || || ||||| || |||||||||| | || || || || || ||| | | Sbjct 6210 CGTCGAGTTCCACGGCGAACAGAAACAATTCAGCGCGGAGGAGATCTCTTCCATGATTCT 6151 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||| ||||| ||| | ||||||| | ||| | || || || Sbjct 6150 CGTGAAGATGAAGGAAGTCGCGGAGGCTTACCTGGGTAAGGAGATCAAAAACGCGGTGGT 6091 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || || || ||||||| ||||| ||||| || || || |||||||| || | || Sbjct 6090 TACCGTGCCCGCGTACTTCAACGATTCGCAACGGCAAGCCACCAAGGACGCCGCCGTGAT 6031 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||||| | ||||| | | |||||||| ||||| || || || || || || || || Sbjct 6030 CGCGGGCATCAACTGCATGCGCATTATCAACGAACCCACCGCCGCGGCCATCGCGTACGG 5971 Query 195838 TCTGGACAAGAA---CAAGGACGAAG------ATAAAAATGTATTGATCTTTGATCTCGG 195888 |||||||||| | || ||| | | || || |||||||| || ||||| Sbjct 5970 CTTGGACAAGAAAGCCGAGAACGGCGGCGCCGAGCGCAACGTTTTGATCTTCGACCTCGG 5911 Query 195889 TGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGC 195948 || || || || || || || | |||| || |||| || || |||||||| || || Sbjct 5910 CGGCGGCACCTTCGACGTGTCGTTGCTCACAATCGAAGAGGGCATCTTCGAAGTCAAAGC 5851 Query 195949 TACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTT 196008 || || ||||| || || | || || || |||||||| | | | || || Sbjct 5850 CACCGCGGGTGACACGCACTTGGGCGGCGAGGATTTCGACCAGAGGATGATGAACCACTT 5791 Query 196009 GTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCG 196068 | |||||| || ||||| || ||||| || | || || || | || ||||| Sbjct 5790 CGTGCAGGAGTTCAAGCGCAAGAACAAAAAAGACATCACGGGGAACCCGCGCGCGCTTCG 5731 Query 196069 TCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAAT 196128 ||| | | || || || ||| | ||||| || || || || || || || || || | Sbjct 5730 TCGTTTGCGCACCGCGTGCGAAAGAGCCAAGCGCACGCTTTCGTCAACCGCGCAGACCAG 5671 Query 196129 GGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACG 196188 | ||||| || ||| | || || || | || ||||| || | || || || || || Sbjct 5670 CATCGAGATCGACTCGCTTTTCGAGGGTGTAGATTTCTACACCAGCATCACGCGCGCGCG 5611 Query 196189 TTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACT 196248 || |||||| | ||| |||||||| | ||||| |||||||||| || | |||| || Sbjct 5610 CTTCGAAGAGCTTAACATGGATTTGTTCCGCAAGTGCATGGAACCTG-TGGAGAAGTGCT 5552 Query 196249 T-CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307 | || ||| |||||||| || | | || | || || || | ||||| || || | Sbjct 5551 TGCGGGACAGCAAGATGGACAAAGCCACCGTGCACGAGATCGTGATGGTGGGCGGGTCCA 5492 Query 196308 CCCGTATTCCGAAGATTCAACAGATGCT-TTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 |||| ||||| ||| | || |||| || | ||| ||||| ||||| | | Sbjct 5491 CCCGGATTCCCAAGGTGCAGTCCCTGCTCATCGA-CTTTTTCAACGGCAAAGAGCTGTGC 5433 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 || | |||||||| || ||||| || || || || ||||| || ||||| |||||||| Sbjct 5432 AAGAGCATCAACCCCGACGAAGCCGTGGCGTACGGCGCGGCGGTGCAGGCGGCTATTCTT 5373 Query 196427 TCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486 || || | | ||| | || ||||| || |||||||| || || || | ||| | ||| Sbjct 5372 TCGGGCGAGGGCAACGAAAAGGTCCAGGACCTTCTGCTTCTCGACGTCTCGCCCCTGTCC 5313 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 |||| || ||||| | ||| || || ||||| | || | ||||| || || Sbjct 5312 ATGGGCCTGGAAACCGTGGGCGGCGTCATGACCGTGCTGATCCCGCGAAACACCACCATC 5253 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 || || || || ||||| || || || ||||| |||||| ||||| || ||| ||| Sbjct 5252 CCCACCAAAAAAGAACAGGTGTTCTCCACGTACAGCGATAACCAACCTGGGGTTTTGATT 5193 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGAT 196666 || || | ||||| || ||||| || | ||||| ||| | || | || | ||||| Sbjct 5192 CAGGTTTTCGAAGGCGAGCGCTCGCGGACGAAGGACAACAACCTTTTAGGGAAGTTCGAA 5133 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726 | || || || | || || |||| || || || || || || |||||||| || Sbjct 5132 CTACAAGGCATCCCCCCCGCCCCGCGAGGCGTCCCGCAAATCAACGTGTGCTTCGACATC 5073 Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTC-TGGCAAATCTGAA-A 196784 ||||| || || ||||| ||||||| || ||||||||| | | |||| | ||| | Sbjct 5072 GACGCCAACGGCATTCTCAACGTCAGCGCCGAGGACAAGTCCACGGGGCAGA--AGAACA 5015 Query 196785 AGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTC 196844 |||| ||| || || ||||| || ||||| || || || || || ||||| ||||| | Sbjct 5014 AGATCACGATCACGAACGACAAAGGCCGGCTATCGAAAGAAGACATCGAACGCATGGTCC 4955 Query 196845 AAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 | || ||||| ||||||| |||||||||| Sbjct 4954 AGGAAGCGGAGAAGTACAAATCCGAAGACGAGG 4922 >seq520 Length=32656 Score = 168 bits (186), Expect = 9e-37 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||| ||||| ||||| || ||||| ||||| ||| |||| || Sbjct 23769 ACGGGTAAGACCATCACCCTGGAGGTGGAGTCTTCGGACACCATCGACAACGTCAAGGCT 23710 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || |||||||||||||| ||||| ||||| || || || || || || || Sbjct 23709 AAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAGCAGCGTCTCATCTTCGCGGGCAAG 23650 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| || || || |||||||| ||||||||| | || ||||| || || || ||| Sbjct 23649 CAGCTTGAGGACGGCCGCACCCTCGCGGATTACAACATCCAGAAGGAATCCACCCTGCAC 23590 Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088 || || || | ||||| ||||| Sbjct 23589 CTCGTCCTGCGCCTTCGCGGTGG 23567 >seq247 Length=13427 Score = 143 bits (158), Expect = 4e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 || || || || |||||||||||||| ||||| || ||||| ||||| ||| | || || Sbjct 6053 ACGGGTAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACCATCGACAACGTGAAGGCG 6112 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 || || || || ||||| || || || || || ||||| || || ||||| || || || Sbjct 6113 AAAATCCAGGACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTCATTTTCGCGGGCAAG 6172 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 |||||||| ||||| || || ||||| ||||||||| | || ||||| || || || ||| Sbjct 6173 CAGCTTGAGGATGGCCGCACGCTCGCGGATTACAACATCCAGAAGGAATCCACGCTTCAC 6232 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || | || || || ||| Sbjct 6233 CTGGTGCTCCGCCTGCGCGGAGGT 6256 >seq648 Length=41169 Score = 114 bits (126), Expect = 2e-20 Identities = 163/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| || | ||||| || || |||||||| ||||||||||| || Sbjct 13344 ATGCAGATCTTCGTGAAGACGTTGACTGGCAAGACCATCACCCTGGAGGTTGAGTCTTCG 13403 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| | || || ||||| || || | ||||||| | || |||| || Sbjct 13404 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAGGGAAGGCTTACCCCCCG-CCAC 13462 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || || || | || | ||||| ||||| | || || | || || |||||| Sbjct 13463 CAGCGTCTCATCTTCGTGGGCAGGCAGCTCGAAGACGTCCGCACGTTGGCGGACTACAAC 13522 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || | ||| || || || |||| || || || || |||||| Sbjct 13523 ATCCAGATGGAATCCACGCTCGACCTGGTGCTTTCCCTCCGCGGTGGT 13570 Score = 104 bits (114), Expect = 3e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 171865 CAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGAC 171924 || ||||| ||||| || | ||||| || || |||||||| ||||||||||| || ||| Sbjct 13589 CAGATCTTCGTGAAGACTCCGACTGGCAAGACCATCACCCTGGAGGTTGAGTCTTCGGAC 13648 Query 171925 ACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAA 171984 || |||| ||| | || || || ||||| || ||||||||||| || ||||| ||||| Sbjct 13649 ACCATCGCCAACGTGAAGGCGAATATTCAGGACAAGGAAGGCATCCCCCCCGACCAGCAG 13708 Query 171985 CG 171986 || Sbjct 13709 CG 13710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657853609313680