Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20sp._20ASP10-01a_20[genbank_20GCA_5F001430725.1_202015- 04-28] 1,069 sequences; 19,582,411 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq564 89.7 5e-13 >seq564 Length=17261 Score = 89.7 bits (98), Expect = 5e-13 Identities = 164/239 (69%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 50502 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGC 50561 |||||||| || || ||||||||||| | ||||| | |||||| | || ||||| Sbjct 9339 GAAGCCGTGGAGATTGAAAAAGAGTTCCTGTGCGACGCACTGCCCGTGTCCCTGGTGGGC 9398 Query 50562 ATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAG 50621 |||||| ||| |||||| || ||||| ||||| || || || ||| ||| ||| Sbjct 9399 ATGAACAAAGAGCTGATGTCGGACTACATCGAGTTCGTCGCGGATCACTTGCTGTGCCAG 9458 Query 50622 CTGGGAC---AACCGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATA 50678 || || | || | ||||| | | || ||||| || | ||| | ||| Sbjct 9459 CTCGGGCTGGAAAAGGAATACAACACCGC---GAACCCGTTCGACTGGATGGAGCTCATC 9515 Query 50679 TCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATACAAAATGTTTGG 50737 ||| | | || ||||| ||||||||||||| ||| |||||||| ||| | | || ||| Sbjct 9516 TCGCTTCAAGGTAAAACCAACTTTTTCGAAAAACGCGTAGGCGAGTACCAGAAGTCTGG 9574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488537471830800